MGE detailed information
MGE type: Genomic_island MGE length: 21234 bp
Accession: NZ_CP044143 Location: 1853230..1874463 Organism: Escherichia coli O157 strain AR-0429 Replicon: chromosome
Accession: NZ_CP044143 Location: 1853230..1874463 Organism: Escherichia coli O157 strain AR-0429 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V41_RS10455 () | 1848956..1849498 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| F4V41_RS10460 () | 1849791..1851941 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| F4V41_RS10465 () | 1851991..1852194 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| F4V41_RS10470 () | 1852205..1853161 | + | 957 | WP_001297640.1 | GTPase | - |
| F4V41_RS10475 () | 1853230..1854588 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| F4V41_RS10480 () | 1854597..1854881 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| F4V41_RS10485 () | 1855159..1857591 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| F4V41_RS10490 () | 1857658..1859127 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| F4V41_RS10495 () | 1859127..1860881 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 1861031..1861107 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1861031..1861107 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1861031..1861107 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1861031..1861107 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1861031..1861107 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 1861031..1861107 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 1861031..1861107 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 1861031..1861107 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| F4V41_RS10500 () | 1861102..1861443 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| F4V41_RS10505 () | 1861490..1862653 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| F4V41_RS10510 () | 1862701..1863582 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| F4V41_RS10515 () | 1863679..1863843 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| F4V41_RS10520 () | 1864020..1865432 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| F4V41_RS29415 () | 1865675..1865875 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| F4V41_RS10525 () | 1865880..1866632 | - | 753 | Protein_1798 | Recombination-promoting nuclease RpnD | VF |
| F4V41_RS10530 () | 1867099..1868331 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| F4V41_RS10535 () | 1868372..1869643 | + | 1272 | WP_151121022.1 | DUF445 domain-containing protein | - |
| F4V41_RS10540 () | 1869759..1870910 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| F4V41_RS10545 () | 1870920..1871687 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| F4V41_RS10550 () | 1871684..1871950 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| F4V41_RS10555 () | 1872262..1874463 | + | 2202 | WP_000535071.1 | hypothetical protein | VF |
| F4V41_RS10565 () | 1874729..1875571 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| F4V41_RS10570 () | 1875639..1876817 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |