MGE detailed information
MGE type: Genomic_island MGE length: 21239 bp
Accession: NZ_CP044140 Location: 1266235..1287473 Organism: Escherichia coli O157 strain AR-0430 Replicon: chromosome
Accession: NZ_CP044140 Location: 1266235..1287473 Organism: Escherichia coli O157 strain AR-0430 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V42_RS07485 () | 1261961..1262503 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| F4V42_RS07490 () | 1262796..1264946 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| F4V42_RS07495 () | 1264996..1265199 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| F4V42_RS07500 () | 1265210..1266166 | + | 957 | WP_001297640.1 | GTPase | - |
| F4V42_RS07505 () | 1266235..1267593 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| F4V42_RS07510 () | 1267602..1267886 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| F4V42_RS07515 () | 1268164..1270596 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| F4V42_RS07520 () | 1270663..1272132 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| F4V42_RS07525 () | 1272132..1273886 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 1274036..1274112 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1274036..1274112 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1274036..1274112 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1274036..1274112 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1274036..1274112 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 1274036..1274112 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 1274036..1274112 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 1274036..1274112 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| F4V42_RS07530 () | 1274107..1274448 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| F4V42_RS07535 () | 1274495..1275658 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| F4V42_RS07540 () | 1275706..1276587 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| F4V42_RS07545 () | 1276684..1276848 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| F4V42_RS07550 () | 1277025..1278437 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| F4V42_RS29965 () | 1278680..1278880 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| F4V42_RS07555 () | 1278885..1279637 | - | 753 | Protein_1163 | hypothetical protein | VF |
| F4V42_RS07560 () | 1280104..1281336 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| F4V42_RS07565 () | 1281377..1282647 | + | 1271 | Protein_1165 | DUF445 domain-containing protein | - |
| F4V42_RS07570 () | 1282763..1283914 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| F4V42_RS07575 () | 1283924..1284691 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| F4V42_RS07580 () | 1284688..1284954 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| F4V42_RS07585 () | 1285266..1287473 | + | 2208 | WP_000535072.1 | Pyruvate, phosphate dikinase | VF |
| F4V42_RS07595 () | 1287739..1288581 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| F4V42_RS07600 () | 1288649..1289827 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |