MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_CP043950 Location: 1050145..1070826 Organism: Escherichia coli strain ST95-32 Replicon: chromosome
Accession: NZ_CP043950 Location: 1050145..1070826 Organism: Escherichia coli strain ST95-32 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3J96_RS05170 () | 1046260..1046685 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| F3J96_RS05175 () | 1046690..1048174 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| F3J96_RS05180 () | 1048197..1048700 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| F3J96_RS05185 () | 1049406..1049924 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| F3J96_RS05190 () | 1050145..1052127 | + | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| F3J96_RS05195 () | 1052234..1053280 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| F3J96_RS05200 () | 1053273..1054712 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| F3J96_RS05205 () | 1054687..1054977 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| F3J96_RS05210 () | 1055235..1055999 | + | 765 | Protein_977 | ISAs1 family transposase ISEc1 | Transposase |
| F3J96_RS05215 () | 1056228..1056731 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| F3J96_RS05220 () | 1056825..1057313 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| F3J96_RS05225 () | 1057339..1057533 | + | 195 | Protein_980 | ISAs1 family transposase | - |
| F3J96_RS05230 () | 1057584..1058354 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| F3J96_RS05235 () | 1058535..1058981 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| F3J96_RS05240 () | 1059024..1061468 | - | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| F3J96_RS05245 () | 1061708..1062286 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| F3J96_RS05250 () | 1062491..1063258 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| F3J96_RS05255 () | 1063229..1063969 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| F3J96_RS05260 () | 1064281..1065030 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| F3J96_RS05265 () | 1065206..1065703 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| F3J96_RS27730 () | 1065786..1065944 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| F3J96_RS05270 () | 1066023..1067735 | - | 1713 | Protein_990 | Flagellar biosynthesis protein FlhA | VF |
| F3J96_RS05275 () | 1067707..1068492 | + | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| F3J96_RS05280 () | 1068563..1069618 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| F3J96_RS05285 () | 1069670..1069963 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| F3J96_RS05290 () | 1069966..1070364 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| F3J96_RS05295 () | 1070374..1070826 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| F3J96_RS05300 () | 1071016..1072155 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| F3J96_RS05305 () | 1072152..1072766 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| F3J96_RS05310 () | 1072823..1074280 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| F3J96_RS05315 () | 1074541..1074999 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 1075595..1075675 | + | 81 | NuclAT_4 | - | - |
| - () | 1075595..1075675 | + | 81 | NuclAT_4 | - | - |
| - () | 1075595..1075675 | + | 81 | NuclAT_4 | - | - |
| - () | 1075595..1075675 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|