MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 149674 bp
Accession: NZ_CP043925 Location: 424175..573848 Organism: Proteus columbae strain T60 Replicon: chromosome
Accession: NZ_CP043925 Location: 424175..573848 Organism: Proteus columbae strain T60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1325_RS02050 () | 419346..420797 | + | 1452 | WP_036914641.1 | Trk system potassium transporter TrkH | - |
| F1325_RS02055 () | 420818..421348 | + | 531 | WP_100158035.1 | menaquinone-dependent protoporphyrinogen IX dehydrogenase | - |
| F1325_RS02080 () | 427120..427779 | - | 660 | WP_109374285.1 | GntR family transcriptional regulator | - |
| F1325_RS02085 () | 428248..429498 | + | 1251 | WP_160229930.1 | divalent metal cation transporter | - |
| F1325_RS02090 () | 429512..430297 | + | 786 | WP_109374287.1 | LamB/YcsF family protein | - |
| F1325_RS02095 () | 430300..431106 | + | 807 | WP_160229931.1 | putative hydro-lyase | - |
| F1325_RS02100 () | 431121..432698 | + | 1578 | WP_109374289.1 | 5-oxoprolinase/urea amidolyase family protein | - |
| F1325_RS02105 () | 432715..434460 | + | 1746 | WP_160229932.1 | ATP-grasp domain-containing protein | - |
| F1325_RS02110 () | 434644..435441 | + | 798 | WP_160229933.1 | sulfite exporter TauE/SafE family protein | - |
| F1325_RS02115 () | 435546..435776 | + | 231 | WP_100159878.1 | hypothetical protein | - |
| F1325_RS02120 () | 435815..436255 | - | 441 | WP_109374292.1 | PACE efflux transporter | - |
| F1325_RS02125 () | 436366..437268 | + | 903 | WP_109374293.1 | HTH-type transcriptional activator AllS | VF |
| F1325_RS02130 () | 437265..437918 | - | 654 | WP_109374313.1 | Nitrate/nitrite response regulator protein NarL | VF |
| F1325_RS02135 () | 437944..439749 | - | 1806 | WP_160229934.1 | nitrate/nitrite two-component system sensor histidine kinase NarX | - |
| F1325_RS02140 () | 440047..441441 | + | 1395 | WP_160229935.1 | NarK family nitrate/nitrite MFS transporter | - |
| F1325_RS02145 () | 441494..445255 | + | 3762 | WP_160229936.1 | nitrate reductase subunit alpha | - |
| F1325_RS02150 () | 445255..446808 | + | 1554 | WP_088493882.1 | nitrate reductase subunit beta | - |
| F1325_RS02155 () | 446808..447533 | + | 726 | WP_167392502.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| F1325_RS02160 () | 447530..448207 | + | 678 | WP_109374299.1 | respiratory nitrate reductase subunit gamma | - |
| F1325_RS02165 () | 448571..449194 | + | 624 | WP_023583682.1 | hydrolase | - |
| F1325_RS02170 () | 449316..450512 | + | 1197 | WP_109374300.1 | lactate oxidase | - |
| F1325_RS02175 () | 450623..452314 | - | 1692 | WP_160229937.1 | Kdo(2)-lipid A phosphoethanolamine 7''-transferase | VF |
| F1325_RS02180 () | 452845..454989 | + | 2145 | WP_160229938.1 | formate dehydrogenase subunit alpha | - |
| F1325_RS02185 () | 455090..455977 | - | 888 | WP_109374303.1 | 2OG-Fe dioxygenase family protein | - |
| F1325_RS02190 () | 456149..457762 | - | 1614 | WP_109374304.1 | DNA-binding transcriptional activator HyfR | VF |
| F1325_RS02195 () | 458167..458724 | + | 558 | WP_109374305.1 | electron transport protein HydN | - |
| F1325_RS02200 () | 458797..459138 | + | 342 | WP_109374306.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| F1325_RS02205 () | 459147..459440 | + | 294 | WP_160229939.1 | hydrogenase maturation factor HybG | - |
| F1325_RS02210 () | 459571..459885 | + | 315 | WP_160229940.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| F1325_RS19225 () | 459913..460437 | - | 525 | WP_196564497.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| F1325_RS19230 () | 460382..460825 | - | 444 | WP_196564491.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| F1325_RS02220 () | 460822..461232 | - | 411 | WP_160229941.1 | S-adenosylhomocysteine hydrolase | Antitoxin Detail |
| F1325_RS02225 () | 461655..462865 | + | 1211 | WP_160229872.1 | IS3 family transposase ISVisp4 | Transposase |
| F1325_RS02230 () | 462908..463267 | - | 360 | WP_006535438.1 | fumarate reductase subunit FrdD | - |
| F1325_RS02235 () | 463282..463674 | - | 393 | WP_088493866.1 | fumarate reductase subunit FrdC | - |
| F1325_RS02240 () | 463689..464426 | - | 738 | WP_075672948.1 | succinate dehydrogenase/fumarate reductase iron-sulfur subunit | - |
| F1325_RS02245 () | 464419..466215 | - | 1797 | WP_109374308.1 | fumarate reductase (quinol) flavoprotein subunit | - |
| F1325_RS02250 () | 467159..468136 | + | 978 | WP_023583702.1 | elongation factor P--(R)-beta-lysine ligase | - |
| F1325_RS02255 () | 468180..468593 | - | 414 | WP_109374309.1 | hypothetical protein | - |
| F1325_RS02260 () | 468590..469132 | - | 543 | WP_109374310.1 | LemA family protein | - |
| F1325_RS02265 () | 469142..470215 | - | 1074 | WP_160229942.1 | hypothetical protein | - |
| F1325_RS02270 () | 470237..470794 | - | 558 | WP_160229943.1 | LemA family protein | - |
| F1325_RS02275 () | 471198..472277 | - | 1080 | WP_109372059.1 | glycerophosphodiester phosphodiesterase | - |
| F1325_RS02280 () | 472413..473765 | - | 1353 | WP_072063819.1 | glycerol-3-phosphate transporter | - |
| F1325_RS02285 () | 474146..475804 | + | 1659 | WP_208797905.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit A | - |
| F1325_RS02290 () | 475794..477101 | + | 1308 | WP_109372057.1 | glycerol-3-phosphate dehydrogenase subunit GlpB | - |
| F1325_RS02295 () | 477098..478291 | + | 1194 | WP_088493856.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit C | - |
| F1325_RS02300 () | 478471..479616 | - | 1146 | WP_109372055.1 | hypothetical protein | - |
| F1325_RS02305 () | 479676..480779 | - | 1104 | WP_088493854.1 | glycerol dehydrogenase | - |
| F1325_RS02310 () | 481144..481818 | - | 675 | WP_160229944.1 | 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | - |
| F1325_RS02315 () | 482024..482278 | + | 255 | WP_109372081.1 | sulfurtransferase TusA | - |
| F1325_RS02320 () | 482343..484730 | - | 2388 | WP_160229945.1 | zinc/cadmium/mercury/lead-transporting ATPase | - |
| F1325_RS02325 () | 484910..485536 | - | 627 | WP_109372048.1 | lysoplasmalogenase | - |
| F1325_RS02330 () | 485684..486070 | + | 387 | WP_208797906.1 | DUF2500 family protein | - |
| F1325_RS02335 () | 486151..486447 | - | 297 | WP_109372044.1 | DUF1145 family protein | - |
| F1325_RS02340 () | 486465..487049 | - | 585 | WP_160229946.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase | - |
| F1325_RS02345 () | 487278..488792 | + | 1515 | WP_160229947.1 | HTH-type transcriptional repressor NanR | VF |
| F1325_RS02350 () | 488798..489463 | + | 666 | WP_023583735.1 | N-acetylneuraminate lyase | VF |
| F1325_RS02355 () | 489456..490433 | + | 978 | WP_109372037.1 | permease-like cell division protein FtsX | - |
| F1325_RS02360 () | 490806..491660 | + | 855 | WP_023583733.1 | RNA polymerase sigma factor RpoH | - |
| F1325_RS02365 () | 491755..492897 | + | 1143 | WP_160229948.1 | glycerate kinase | - |
| F1325_RS02370 () | 493070..493477 | - | 408 | WP_109372033.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| F1325_RS02375 () | 493489..494676 | - | 1188 | WP_160229949.1 | MFS transporter | - |
| F1325_RS02380 () | 494794..495261 | + | 468 | WP_160229950.1 | MarR family transcriptional regulator | - |
| F1325_RS02385 () | 495317..496069 | - | 753 | WP_109372027.1 | M48 family metallopeptidase | - |
| F1325_RS02390 () | 496565..497665 | - | 1101 | WP_109372024.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| F1325_RS02395 () | 497667..498515 | - | 849 | WP_109372022.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| F1325_RS02400 () | 498515..499399 | - | 885 | WP_109372020.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| F1325_RS02405 () | 499462..500769 | - | 1308 | WP_160229951.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| F1325_RS02410 () | 500944..501678 | + | 735 | WP_109372016.1 | glycerophosphoryl diester phosphodiesterase | - |
| F1325_RS02415 () | 502002..502949 | + | 948 | WP_160229952.1 | carbamate kinase family protein | - |
| F1325_RS02420 () | 503050..504240 | - | 1191 | WP_109372012.1 | cyanate transporter | - |
| F1325_RS02425 () | 504359..505099 | - | 741 | WP_160229953.1 | hypothetical protein | - |
| F1325_RS02430 () | 505237..505767 | + | 531 | WP_109372008.1 | SMI1/KNR4 family protein | - |
| F1325_RS02435 () | 505772..506524 | - | 753 | WP_109372006.1 | DUF3307 domain-containing protein | - |
| F1325_RS02440 () | 506526..507158 | - | 633 | WP_109372004.1 | hypothetical protein | - |
| F1325_RS02445 () | 507396..507692 | - | 297 | WP_004245342.1 | putative protein YrbL | VF |
| F1325_RS02450 () | 507713..508684 | - | 972 | WP_069368388.1 | tRNA dihydrouridine synthase DusB | - |
| F1325_RS02455 () | 509006..509887 | - | 882 | WP_109371982.1 | 50S ribosomal protein L11 methyltransferase | - |
| F1325_RS02460 () | 509911..511356 | - | 1446 | WP_109372079.1 | sodium/pantothenate symporter | - |
| F1325_RS02465 () | 511346..511594 | - | 249 | WP_023582900.1 | YhdT family protein | - |
| F1325_RS02470 () | 511867..513216 | - | 1350 | WP_109371980.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| F1325_RS02475 () | 513229..513699 | - | 471 | WP_023582895.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| F1325_RS02480 () | 513733..514176 | - | 444 | WP_006535378.1 | type II 3-dehydroquinate dehydratase | - |
| F1325_RS02485 () | 514655..515629 | - | 975 | WP_109371978.1 | oxidoreductase | - |
| F1325_RS02490 () | 516317..517360 | + | 1044 | WP_023582893.1 | rod shape-determining protein MreB | - |
| F1325_RS02495 () | 517452..518504 | + | 1053 | WP_160229954.1 | rod shape-determining protein MreC | - |
| F1325_RS02500 () | 518510..518998 | + | 489 | WP_100159963.1 | rod shape-determining protein MreD | - |
| F1325_RS02505 () | 519051..519638 | + | 588 | WP_109371974.1 | septum formation inhibitor Maf | - |
| F1325_RS02510 () | 519635..521104 | + | 1470 | WP_109371972.1 | ribonuclease G | - |
| F1325_RS02515 () | 521150..524950 | + | 3801 | WP_160229955.1 | AsmA2 domain-containing protein YhdP | - |
| F1325_RS02520 () | 524947..525807 | + | 861 | WP_151434176.1 | carbon-nitrogen hydrolase family protein | - |
| F1325_RS02525 () | 525804..527249 | + | 1446 | WP_109371966.1 | metalloprotease TldD | - |
| F1325_RS02530 () | 527336..527836 | + | 501 | WP_160229956.1 | ribonuclease | - |
| F1325_RS02535 () | 527836..528117 | + | 282 | WP_109371962.1 | barstar family protein | - |
| F1325_RS02540 () | 528191..528751 | - | 561 | WP_088495963.1 | ribosome-associated protein | - |
| F1325_RS02545 () | 528939..530267 | + | 1329 | WP_109371960.1 | metalloprotease PmbA | - |
| F1325_RS02550 () | 530384..530794 | - | 411 | WP_075671465.1 | nucleoside diphosphate kinase regulator | - |
| F1325_RS02555 () | 530970..531242 | - | 273 | WP_006535359.1 | PTS phosphocarrier protein NPr | - |
| F1325_RS02560 () | 531239..532093 | - | 855 | WP_023582880.1 | RNase adapter RapZ | - |
| F1325_RS02565 () | 532173..532640 | - | 468 | WP_023582879.1 | PTS IIA-like nitrogen regulatory protein PtsN | - |
| F1325_RS02570 () | 532790..533077 | - | 288 | WP_036913954.1 | ribosome hibernation promoting factor | - |
| F1325_RS02575 () | 533101..534582 | - | 1482 | WP_160229957.1 | Transcription elongation factor GreA | VF |
| F1325_RS02580 () | 534642..535367 | - | 726 | WP_006535352.1 | RNA-binding protein YhbY | VF |
| F1325_RS02585 () | 535374..535907 | - | 534 | WP_075671459.1 | lipopolysaccharide ABC transporter substrate-binding protein LptA | - |
| F1325_RS02590 () | 535888..536466 | - | 579 | WP_075671457.1 | LPS export ABC transporter periplasmic protein LptC | - |
| F1325_RS02595 () | 536483..537040 | - | 558 | WP_109371956.1 | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | - |
| F1325_RS02600 () | 537068..538042 | - | 975 | WP_109371954.1 | Phosphoglucosamine mutase | VF |
| F1325_RS02605 () | 538061..539041 | - | 981 | WP_160229958.1 | calcium/sodium antiporter | - |
| F1325_RS02610 () | 539283..540095 | + | 813 | WP_100159974.1 | Putative phosphoethanolamine transferase YhbX | VF |
| F1325_RS02615 () | 540099..540878 | + | 780 | WP_109371950.1 | lipid asymmetry maintenance ABC transporter permease subunit MlaE | - |
| F1325_RS02620 () | 540882..541418 | + | 537 | WP_099074096.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| F1325_RS02625 () | 541515..542144 | + | 630 | WP_109371945.1 | phospholipid-binding protein MlaC | - |
| F1325_RS02630 () | 542146..542439 | + | 294 | WP_109371943.1 | lipid asymmetry maintenance protein MlaB | - |
| F1325_RS02635 () | 542580..542834 | + | 255 | WP_006535338.1 | BolA family iron metabolism protein IbaG | - |
| F1325_RS02640 () | 542882..544144 | + | 1263 | WP_088493805.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| F1325_RS02645 () | 544339..545400 | + | 1062 | WP_109371941.1 | DUF2157 domain-containing protein | - |
| F1325_RS02650 () | 545434..545679 | + | 246 | WP_109371939.1 | hypothetical protein | - |
| F1325_RS02655 () | 545707..546777 | - | 1071 | WP_109371937.1 | Lipoprotein NlpI | VF |
| F1325_RS02660 () | 546984..548375 | - | 1392 | WP_109371935.1 | ATP-dependent RNA helicase DeaD | VF |
| F1325_RS02665 () | 548607..549011 | - | 405 | WP_023582864.1 | DUF1043 family protein | - |
| F1325_RS02670 () | 549215..550330 | + | 1116 | WP_109371933.1 | cell division protein ZapE | - |
| F1325_RS02675 () | 550765..551193 | + | 429 | WP_006535327.1 | 50S ribosomal protein L13 | - |
| F1325_RS02680 () | 551209..551601 | + | 393 | WP_004245284.1 | 30S ribosomal protein S9 | - |
| F1325_RS02685 () | 552258..552899 | + | 642 | WP_023582862.1 | stringent starvation protein A | - |
| F1325_RS02690 () | 552906..553415 | + | 510 | WP_160229959.1 | ClpXP protease specificity-enhancing factor | - |
| F1325_RS02695 () | 553532..554800 | - | 1269 | WP_109371927.1 | amidohydrolase | - |
| F1325_RS02700 () | 554815..556089 | - | 1275 | WP_109371925.1 | C4-dicarboxylate transporter DcuC | - |
| F1325_RS02705 () | 556599..557996 | - | 1398 | WP_109371923.1 | FAD-dependent oxidoreductase | - |
| F1325_RS02710 () | 558006..562466 | - | 4461 | WP_160229960.1 | glutamate synthase large subunit | - |
| F1325_RS02715 () | 563141..565477 | + | 2337 | WP_160229961.1 | Putative two-component membrane permease complex subunit SMU_747c | VF |
| F1325_RS02720 () | 565714..566364 | + | 651 | WP_109371917.1 | isoprenoid biosynthesis glyoxalase ElbB | - |
| F1325_RS02725 () | 566385..567083 | + | 699 | WP_160229962.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| F1325_RS02730 () | 567089..567979 | - | 891 | WP_160229963.1 | AraC family transcriptional regulator | - |
| F1325_RS02735 () | 568474..569310 | + | 837 | WP_160229964.1 | urease accessory protein UreD | - |
| F1325_RS02740 () | 569332..569634 | + | 303 | WP_023582851.1 | Ribosomal RNA small subunit methyltransferase I | VF |
| F1325_RS02745 () | 569643..569969 | + | 327 | WP_069368686.1 | putative fimbrial-like protein YraK | VF |
| F1325_RS02750 () | 569966..571669 | + | 1704 | WP_109371909.1 | Outer membrane usher protein YraJ | VF |
| F1325_RS02755 () | 571696..572202 | + | 507 | WP_160229965.1 | urease accessory protein UreE | - |
| F1325_RS02760 () | 572227..572892 | + | 666 | WP_160229966.1 | urease accessory protein UreF | - |
| F1325_RS02765 () | 572902..573519 | + | 618 | WP_006535303.1 | Glucosamine-6-phosphate deaminase 1 | VF |
| F1325_RS02770 () | 573633..574211 | - | 579 | WP_023582845.1 | divisome-associated lipoprotein YraP | - |
| F1325_RS02775 () | 574221..574811 | - | 591 | WP_004245257.1 | DnaA initiator-associating protein DiaA | - |
| F1325_RS02780 () | 574834..575211 | - | 378 | WP_109371903.1 | YraN family protein | - |
| F1325_RS02785 () | 575292..577049 | - | 1758 | WP_160229967.1 | penicillin-binding protein activator | - |
| F1325_RS02790 () | 577111..577989 | + | 879 | WP_023582842.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|