MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87411 bp
Accession: NZ_CP043925 Location: 3351959..3439369 Organism: Proteus columbae strain T60 Replicon: chromosome
Accession: NZ_CP043925 Location: 3351959..3439369 Organism: Proteus columbae strain T60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1325_RS15655 () | 3347536..3349125 | - | 1590 | WP_160230691.1 | peptide chain release factor 3 | - |
| F1325_RS15660 () | 3349382..3350029 | - | 648 | WP_000854920.1 | LexA family transcriptional regulator | - |
| F1325_RS15665 () | 3350147..3350398 | + | 252 | WP_000451746.1 | helix-turn-helix domain-containing protein | - |
| F1325_RS15670 () | 3350454..3351323 | + | 870 | WP_008843243.1 | hypothetical protein | - |
| F1325_RS15675 () | 3351364..3351972 | + | 609 | WP_025587951.1 | hypothetical protein | - |
| F1325_RS15680 () | 3351959..3352507 | + | 549 | WP_040132806.1 | lytic transglycosylase domain-containing protein | - |
| F1325_RS15685 () | 3352504..3352803 | + | 300 | WP_000210563.1 | flagellar transcriptional regulator FlhD | - |
| F1325_RS15690 () | 3352800..3353333 | + | 534 | WP_000566755.1 | hypothetical protein | - |
| F1325_RS15695 () | 3353391..3353822 | + | 432 | WP_007105462.1 | hypothetical protein | - |
| F1325_RS15700 () | 3353855..3357424 | - | 3570 | WP_160230692.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| F1325_RS15705 () | 3357428..3358816 | - | 1389 | WP_156734044.1 | conjugal transfer protein TraH | - |
| F1325_RS15710 () | 3358819..3359763 | - | 945 | WP_156734045.1 | thioredoxin family protein | - |
| F1325_RS15715 () | 3359945..3360697 | - | 753 | WP_156734047.1 | NYN domain-containing protein | - |
| F1325_RS15720 () | 3360807..3361139 | - | 333 | WP_156734049.1 | multidrug efflux SMR transporter | - |
| F1325_RS15725 () | 3361595..3362302 | - | 708 | WP_156734051.1 | hypothetical protein | - |
| F1325_RS15730 () | 3362392..3363465 | - | 1074 | WP_156734053.1 | toprim domain-containing protein | - |
| F1325_RS15735 () | 3363557..3363898 | - | 342 | WP_156734055.1 | plasmid-related protein | - |
| F1325_RS15740 () | 3363898..3364395 | - | 498 | WP_156734057.1 | DNA repair protein RadC | - |
| F1325_RS15745 () | 3364481..3366136 | - | 1656 | WP_156734058.1 | VWA domain-containing protein | - |
| F1325_RS15750 () | 3366206..3366646 | - | 441 | WP_156734060.1 | hypothetical protein | - |
| F1325_RS15755 () | 3366708..3367661 | - | 954 | WP_156734062.1 | DUF3150 domain-containing protein | - |
| F1325_RS15760 () | 3367760..3368527 | - | 768 | WP_156734064.1 | hypothetical protein | - |
| F1325_RS15765 () | 3368527..3369486 | - | 960 | WP_024015927.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| F1325_RS15770 () | 3369696..3370712 | - | 1017 | WP_156734065.1 | YqaJ viral recombinase family protein | - |
| F1325_RS19210 () | 3370773..3370916 | - | 144 | WP_164530179.1 | hypothetical protein | - |
| F1325_RS15775 () | 3370999..3371817 | - | 819 | WP_156734067.1 | phage recombination protein Bet | - |
| F1325_RS15780 () | 3371897..3372316 | - | 420 | WP_040132793.1 | single-stranded DNA-binding protein | - |
| F1325_RS15785 () | 3372332..3372658 | - | 327 | WP_160230693.1 | plasmid-related protein | - |
| F1325_RS15790 () | 3373026..3373628 | + | 603 | WP_160230694.1 | hypothetical protein | - |
| F1325_RS15795 () | 3373795..3375699 | - | 1905 | WP_160230695.1 | ATP-dependent helicase | - |
| F1325_RS15800 () | 3375708..3377660 | - | 1953 | WP_160230696.1 | AAA family ATPase | - |
| F1325_RS15805 () | 3378220..3381912 | - | 3693 | WP_160230697.1 | conjugal transfer protein TraN | - |
| F1325_RS15810 () | 3381915..3382943 | - | 1029 | WP_004249369.1 | TraU family protein | - |
| F1325_RS15815 () | 3382927..3384051 | - | 1125 | WP_004249368.1 | hypothetical protein | - |
| F1325_RS15820 () | 3384062..3384574 | - | 513 | WP_004249367.1 | S26 family signal peptidase | - |
| F1325_RS15825 () | 3384558..3384905 | - | 348 | WP_004249366.1 | hypothetical protein | - |
| F1325_RS15830 () | 3384898..3387297 | - | 2400 | WP_024008831.1 | type IV secretion system protein TraC | - |
| F1325_RS15835 () | 3387297..3387989 | - | 693 | WP_031500474.1 | DsbC family protein | - |
| F1325_RS15840 () | 3388121..3389059 | - | 939 | WP_160230698.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| F1325_RS15845 () | 3389052..3389843 | - | 792 | WP_028870246.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| F1325_RS15850 () | 3390064..3390450 | - | 387 | WP_000180225.1 | hypothetical protein | - |
| F1325_RS15855 () | 3390447..3391019 | - | 573 | WP_160230699.1 | type IV conjugative transfer system lipoprotein TraV | - |
| F1325_RS15860 () | 3391094..3392383 | - | 1290 | WP_156734091.1 | TraB/VirB10 family protein | - |
| F1325_RS15865 () | 3392386..3393282 | - | 897 | WP_108479663.1 | type-F conjugative transfer system secretin TraK | - |
| F1325_RS15870 () | 3393266..3393892 | - | 627 | WP_000667167.1 | hypothetical protein | - |
| F1325_RS15875 () | 3393889..3394170 | - | 282 | WP_000433891.1 | type IV conjugative transfer system protein TraL | - |
| F1325_RS15885 () | 3394459..3395046 | + | 588 | WP_156734094.1 | plasmid-related protein | - |
| F1325_RS15890 () | 3395073..3395708 | - | 636 | WP_156734096.1 | DUF4400 domain-containing protein | - |
| F1325_RS15895 () | 3395695..3396255 | - | 561 | WP_160230700.1 | conjugative transfer protein | - |
| F1325_RS15900 () | 3396265..3398085 | - | 1821 | WP_160230701.1 | conjugative transfer system coupling protein TraD | - |
| F1325_RS15905 () | 3398133..3400283 | - | 2151 | WP_160230702.1 | TraI domain-containing protein | - |
| F1325_RS15910 () | 3400401..3401114 | - | 714 | WP_160230703.1 | hypothetical protein | - |
| F1325_RS15915 () | 3401115..3402305 | - | 1191 | WP_046127255.1 | nucleotidyltransferase | - |
| F1325_RS15920 () | 3402298..3403452 | - | 1155 | WP_160230704.1 | SAVED domain-containing protein | - |
| F1325_RS15925 () | 3403462..3403830 | - | 369 | WP_011788464.1 | metal-dependent hydrolase | - |
| F1325_RS15930 () | 3404135..3404686 | - | 552 | WP_046127252.1 | MarR family transcriptional regulator | - |
| F1325_RS15935 () | 3404709..3405794 | - | 1086 | WP_160230705.1 | ATP-binding protein | - |
| F1325_RS15940 () | 3405988..3409218 | - | 3231 | WP_160230706.1 | DEAD/DEAH box helicase family protein | - |
| F1325_RS15945 () | 3409215..3410525 | - | 1311 | WP_160230707.1 | restriction endonuclease subunit S | - |
| F1325_RS15950 () | 3410522..3412600 | - | 2079 | WP_160230708.1 | N-6 DNA methylase | - |
| F1325_RS15955 () | 3412609..3413556 | - | 948 | WP_160230709.1 | WYL domain-containing protein | - |
| F1325_RS15960 () | 3413874..3414173 | - | 300 | WP_047109307.1 | hypothetical protein | - |
| F1325_RS15965 () | 3414373..3415281 | - | 909 | WP_160230710.1 | DNA polymerase III subunit epsilon | - |
| F1325_RS19215 () | 3415687..3415866 | - | 180 | WP_167514936.1 | hypothetical protein | - |
| F1325_RS15970 () | 3415922..3416372 | + | 451 | Protein_3107 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| F1325_RS15975 () | 3416380..3417039 | + | 660 | Protein_3108 | Y-family DNA polymerase | - |
| F1325_RS15980 () | 3417145..3418329 | + | 1185 | WP_002001451.1 | IS4 family transposase ISEc29 | Transposase |
| F1325_RS15985 () | 3418360..3418626 | - | 267 | WP_160230711.1 | Tn3 family transposase | - |
| F1325_RS15990 () | 3418668..3421646 | - | 2979 | WP_000985631.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| F1325_RS16000 () | 3422117..3422932 | + | 816 | WP_001043260.1 | hypothetical protein | ARG |
| F1325_RS16005 () | 3423019..3423321 | + | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| F1325_RS16015 () | 3423497..3424990 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| F1325_RS16020 () | 3425102..3425566 | - | 465 | Protein_3115 | GMP synthase (glutamine-hydrolyzing) | - |
| F1325_RS16025 () | 3425635..3426495 | - | 861 | WP_077782102.1 | alpha/beta fold hydrolase | - |
| F1325_RS16030 () | 3426513..3427676 | - | 1164 | WP_064754130.1 | Kynurenine 3-monooxygenase | ARG |
| F1325_RS16035 () | 3427673..3428050 | - | 378 | WP_044502095.1 | hypothetical protein | - |
| F1325_RS16040 () | 3428434..3429933 | - | 1500 | Protein_3119 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| F1325_RS16045 () | 3430019..3430771 | + | 753 | WP_000602738.1 | IS6 family transposase | - |
| F1325_RS16055 () | 3431193..3432218 | - | 1026 | WP_000742814.1 | hypothetical protein | ARG |
| F1325_RS16060 () | 3432447..3433223 | - | 777 | WP_001199192.1 | hypothetical protein | ARG |
| F1325_RS16065 () | 3433337..3434041 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| F1325_RS16070 () | 3434081..3434482 | + | 402 | WP_001183556.1 | hypothetical protein | - |
| F1325_RS16075 () | 3434619..3435434 | - | 816 | WP_160230712.1 | hypothetical protein | ARG |
| F1325_RS16080 () | 3435564..3436268 | + | 705 | WP_001067856.1 | IS6 family transposase IS15DII | Transposase |
| F1325_RS16085 () | 3436323..3437378 | - | 1056 | Protein_3127 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| F1325_RS16090 () | 3437504..3438118 | + | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| F1325_RS16095 () | 3438237..3439369 | + | 1133 | Protein_3129 | IS3 family transposase ISAba14 | Transposase |
| F1325_RS16100 () | 3439469..3440272 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| F1325_RS16105 () | 3440272..3441108 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| F1325_RS16120 () | 3441440..3442933 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| F1325_RS16125 () | 3443045..3443350 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|