MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 54321 bp
Accession: NZ_CP043848 Location: 1..54321 Organism: Staphylococcus epidermidis strain NCCP 16828 Replicon: plasmid unnamed
Accession: NZ_CP043848 Location: 1..54321 Organism: Staphylococcus epidermidis strain NCCP 16828 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1614_RS12215 () | 841..2110 | + | 1270 | Protein_1 | D-alanyl-D-alanine carboxypeptidase | - |
| F1614_RS12220 () | 2545..3195 | - | 651 | Protein_2 | CPBP family intramembrane metalloprotease | - |
| F1614_RS12615 () | 3563..3733 | - | 171 | WP_002456306.1 | hypothetical protein | - |
| F1614_RS12230 () | 5098..5295 | - | 198 | WP_080395233.1 | plasmid recombination protein | - |
| F1614_RS12235 () | 5365..5619 | + | 255 | WP_002452575.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| F1614_RS12240 () | 5612..5878 | + | 267 | WP_002456261.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| F1614_RS12245 () | 6501..7049 | - | 549 | WP_158171990.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| F1614_RS12250 () | 7363..7719 | + | 357 | WP_002441965.1 | hypothetical protein | - |
| F1614_RS12620 () | 8183..8590 | - | 408 | Protein_9 | cellulase family glycosylhydrolase | - |
| F1614_RS12260 () | 8617..8961 | - | 345 | WP_127133369.1 | hypothetical protein | - |
| F1614_RS12265 () | 9214..10485 | - | 1272 | WP_017464873.1 | cellulase family glycosylhydrolase | - |
| F1614_RS12270 () | 10501..11490 | - | 990 | WP_017464872.1 | chitosanase | - |
| F1614_RS12625 () | 12144..12311 | - | 168 | WP_017464871.1 | hypothetical protein | - |
| F1614_RS12275 () | 12400..12570 | - | 171 | WP_002958807.1 | hypothetical protein | - |
| F1614_RS12280 () | 12821..13219 | + | 399 | Protein_15 | YolD-like family protein | - |
| F1614_RS12285 () | 13252..13431 | - | 180 | WP_001832816.1 | CsbD family protein | - |
| F1614_RS12290 () | 13831..14046 | + | 216 | WP_017464868.1 | hypothetical protein | - |
| F1614_RS12295 () | 14868..15146 | + | 279 | WP_017464867.1 | hypothetical protein | - |
| F1614_RS12300 () | 15148..15531 | + | 384 | WP_017464866.1 | hypothetical protein | - |
| F1614_RS12305 () | 15543..16364 | + | 822 | WP_158171991.1 | hypothetical protein | Relaxase |
| F1614_RS12310 () | 16649..16840 | - | 192 | WP_029376575.1 | DUF418 domain-containing protein | - |
| F1614_RS12315 () | 17983..18954 | - | 972 | WP_017464864.1 | DUF418 domain-containing protein | - |
| F1614_RS12320 () | 19045..19437 | - | 393 | WP_017464863.1 | hypothetical protein | - |
| F1614_RS12325 () | 19791..20552 | - | 762 | WP_017464862.1 | ABC transporter permease | - |
| F1614_RS12330 () | 20560..21249 | - | 690 | WP_017464861.1 | ATP-binding cassette domain-containing protein | - |
| F1614_RS12630 () | 21727..21894 | + | 168 | WP_017464860.1 | hypothetical protein | - |
| F1614_RS12335 () | 22199..22831 | + | 633 | Protein_27 | transposase | - |
| F1614_RS12340 () | 23040..23816 | - | 777 | WP_017464858.1 | carbon-nitrogen family hydrolase | - |
| F1614_RS12345 () | 23820..24479 | - | 660 | WP_017464857.1 | MBL fold metallo-hydrolase | - |
| F1614_RS12350 () | 24585..24926 | + | 342 | WP_029376574.1 | helix-turn-helix transcriptional regulator | - |
| F1614_RS12355 () | 25056..25455 | + | 400 | Protein_31 | HNH endonuclease | - |
| F1614_RS12360 () | 25482..25666 | + | 185 | Protein_32 | IS5/IS1182 family transposase | - |
| F1614_RS12635 () | 25939..26103 | + | 165 | WP_017464852.1 | hypothetical protein | - |
| F1614_RS12365 () | 26422..26517 | + | 96 | WP_017464851.1 | type I toxin-antitoxin system Fst family toxin | - |
| F1614_RS12370 () | 27020..27811 | + | 792 | WP_017464850.1 | poly-gamma-glutamate hydrolase family protein | - |
| F1614_RS12380 () | 28412..29268 | - | 857 | Protein_36 | replication initiator protein A | - |
| F1614_RS12640 () | 29335..29548 | - | 214 | Protein_37 | IS6 family transposase | - |
| F1614_RS12385 () | 29629..30495 | - | 867 | WP_017464845.1 | LysR family transcriptional regulator | - |
| F1614_RS12390 () | 30611..31162 | + | 552 | WP_017464844.1 | flavodoxin family protein | - |
| F1614_RS12395 () | 31155..32375 | + | 1221 | WP_017464843.1 | MFS transporter | - |
| F1614_RS12400 () | 32381..33175 | - | 795 | WP_080395234.1 | helix-turn-helix transcriptional regulator | - |
| F1614_RS12405 () | 33368..33538 | + | 171 | WP_017464841.1 | lysine biosynthesis protein LysW | - |
| F1614_RS12410 () | 33541..34392 | + | 852 | WP_029376572.1 | RimK family alpha-L-glutamate ligase | - |
| F1614_RS12415 () | 34385..34996 | + | 612 | WP_017464839.1 | hypothetical protein | - |
| F1614_RS12420 () | 34997..36316 | + | 1320 | WP_017464838.1 | GDP-perosamine synthase | VF |
| F1614_RS12425 () | 36313..37335 | + | 1023 | WP_158171992.1 | N-acetyl-gamma-glutamyl-phosphate reductase | - |
| F1614_RS12430 () | 37335..39176 | + | 1842 | WP_158171993.1 | M20/M25/M40 family metallo-hydrolase | - |
| F1614_RS12435 () | 39181..39957 | + | 777 | WP_029376571.1 | transketolase | - |
| F1614_RS12440 () | 39957..40862 | + | 906 | WP_017464834.1 | transketolase | - |
| F1614_RS12445 () | 40862..42088 | + | 1227 | WP_017464833.1 | ATP-grasp domain-containing protein | - |
| F1614_RS12450 () | 42264..42874 | - | 611 | Protein_51 | recombinase family protein | - |
| F1614_RS12455 () | 43344..43445 | - | 102 | WP_002497230.1 | type I toxin-antitoxin system Fst family toxin | - |
| F1614_RS12460 () | 44190..44282 | + | 93 | WP_115172131.1 | type I toxin-antitoxin system Fst family toxin | - |
| F1614_RS12465 () | 44744..44818 | + | 75 | WP_126721019.1 | epsilon family phenol-soluble modulin | - |
| F1614_RS12470 () | 45206..45676 | - | 471 | Protein_55 | RepB family plasmid replication initiator protein | - |
| F1614_RS12645 () | 45982..46149 | + | 168 | WP_002498713.1 | hypothetical protein | - |
| F1614_RS12475 () | 46822..47176 | - | 355 | Protein_57 | hypothetical protein | - |
| F1614_RS12480 () | 47188..47398 | - | 211 | Protein_58 | hypothetical protein | - |
| F1614_RS12485 () | 47893..47988 | + | 96 | WP_017464887.1 | ATP-binding cassette domain-containing protein | - |
| F1614_RS12490 () | 48934..49494 | - | 561 | WP_158171994.1 | TIGR00730 family Rossman fold protein | - |
| F1614_RS12500 () | 49726..50733 | - | 1008 | WP_017464886.1 | replication initiator protein A | - |
| F1614_RS12505 () | 51150..51941 | + | 792 | WP_017464885.1 | ParA family protein | - |
| F1614_RS12510 () | 51947..52243 | + | 297 | WP_017464884.1 | hypothetical protein | - |
| F1614_RS12515 () | 52788..52943 | + | 156 | WP_017464883.1 | hypothetical protein | - |
| F1614_RS12520 () | 52999..53286 | - | 288 | WP_017464882.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|