MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37652 bp
Accession: NZ_CP043826 Location: 1..37652 Organism: Escherichia coli strain RM8082 Replicon: plasmid p4RM8082
Accession: NZ_CP043826 Location: 1..37652 Organism: Escherichia coli strain RM8082 Replicon: plasmid p4RM8082
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1745_RS25570 (F1745_25715) | 1681..2256 | - | 576 | WP_047090415.1 | hypothetical protein | - |
| F1745_RS25575 (F1745_25720) | 2281..2868 | - | 588 | WP_047090414.1 | DUF6012 family protein | - |
| F1745_RS25580 (F1745_25730) | 3232..3984 | - | 753 | WP_238014199.1 | hypothetical protein | - |
| F1745_RS25585 (F1745_25740) | 4262..4750 | - | 489 | WP_047090411.1 | thermonuclease family protein | - |
| F1745_RS25590 (F1745_25745) | 4747..5064 | - | 318 | WP_000623495.1 | hypothetical protein | - |
| F1745_RS25595 (F1745_25750) | 5178..5435 | - | 258 | WP_000726018.1 | hypothetical protein | - |
| F1745_RS25600 (F1745_25755) | 5441..5746 | - | 306 | WP_094318525.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| F1745_RS25605 (F1745_25760) | 5762..7729 | - | 1968 | WP_021558906.1 | type IV secretory system conjugative DNA transfer family protein | - |
| F1745_RS25610 (F1745_25765) | 7780..8799 | - | 1020 | WP_001287983.1 | Type IV secretion system protein VirB11 | VF |
| F1745_RS25615 (F1745_25770) | 8799..9941 | - | 1143 | WP_000787412.1 | Type IV secretion system protein virB10 | VF |
| F1745_RS25620 (F1745_25775) | 9931..10710 | - | 780 | WP_000592647.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| F1745_RS25625 (F1745_25780) | 10707..11444 | - | 738 | WP_000364523.1 | Type IV secretion system protein PtlE | VF |
| F1745_RS25630 (F1745_25790) | 11575..13947 | - | 2373 | WP_238014208.1 | conjugal transfer protein | - |
| F1745_RS25635 (F1745_25795) | 13950..14270 | - | 321 | WP_001000143.1 | VirB3 family type IV secretion system protein | - |
| F1745_RS25640 (F1745_25800) | 14328..14621 | - | 294 | WP_001031682.1 | TrbC/VirB2 family protein | - |
| F1745_RS25645 (F1745_25805) | 14614..15225 | - | 612 | WP_000244005.1 | Type IV secretion system protein virB1 | VF |
| F1745_RS25650 (F1745_25810) | 15291..15932 | - | 642 | WP_000910600.1 | type IV secretion system protein | - |
| F1745_RS25655 (F1745_25815) | 15932..16156 | - | 225 | WP_000758236.1 | EexN family lipoprotein | - |
| F1745_RS25660 (F1745_25820) | 16158..17135 | - | 978 | WP_001021612.1 | type IV secretion system protein | - |
| F1745_RS25665 (F1745_25830) | 17580..17852 | - | 273 | WP_074400780.1 | hypothetical protein | - |
| F1745_RS25670 (F1745_25835) | 18114..18383 | - | 270 | WP_000190069.1 | hypothetical protein | - |
| F1745_RS25675 (F1745_25840) | 18506..19519 | - | 1014 | WP_024176825.1 | replication initiation protein | - |
| F1745_RS25680 (F1745_25855) | 22229..22552 | + | 324 | WP_064565519.1 | hypothetical protein | - |
| F1745_RS25685 (F1745_25860) | 22593..22817 | + | 225 | WP_064565522.1 | hypothetical protein | - |
| F1745_RS25690 (F1745_25865) | 22913..23137 | + | 225 | WP_000749828.1 | hypothetical protein | - |
| F1745_RS25695 (F1745_25870) | 23188..23454 | + | 267 | WP_000868277.1 | hypothetical protein | Toxin Detail |
| F1745_RS25700 (F1745_25875) | 23444..23686 | + | 243 | WP_001450803.1 | hypothetical protein | Antitoxin Detail |
| F1745_RS25705 (F1745_25885) | 24126..24455 | + | 330 | WP_021558913.1 | hypothetical protein | - |
| F1745_RS25710 (F1745_25890) | 24513..24791 | + | 279 | WP_064565525.1 | hypothetical protein | - |
| F1745_RS25715 (F1745_25895) | 25224..25406 | + | 183 | WP_000833471.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| F1745_RS25720 (F1745_25900) | 25431..25868 | + | 438 | WP_000466317.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| F1745_RS25725 (F1745_25905) | 25897..26601 | - | 705 | WP_032274884.1 | hypothetical protein | - |
| F1745_RS25730 (F1745_25910) | 26598..27359 | - | 762 | WP_001097938.1 | conjugal transfer protein TraL | - |
| F1745_RS25735 (F1745_25915) | 27369..27776 | - | 408 | WP_001190621.1 | hypothetical protein | - |
| F1745_RS25740 (F1745_25920) | 28122..28457 | + | 336 | WP_000963832.1 | hypothetical protein | Relaxase |
| F1745_RS25745 (F1745_25925) | 28454..31651 | + | 3198 | WP_238014196.1 | relaxase | - |
| F1745_RS25750 (F1745_25940) | 32329..32631 | - | 303 | WP_001505324.1 | hypothetical protein | - |
| F1745_RS25755 (F1745_25950) | 33011..33670 | - | 660 | WP_021558909.1 | hypothetical protein | - |
| F1745_RS25760 (F1745_25955) | 33785..34600 | - | 816 | WP_074568656.1 | Tyrosine recombinase XerD | VF |
| F1745_RS25765 (F1745_25970) | 35294..36250 | - | 957 | WP_064565530.1 | Abi family protein | - |
| F1745_RS25770 (F1745_25975) | 36673..37041 | - | 369 | WP_024176821.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|