MGE detailed information
MGE type: Genomic_island MGE length: 54388 bp
Accession: NZ_CP043825 Location: 4123569..4177956 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Accession: NZ_CP043825 Location: 4123569..4177956 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1745_RS20485 (4119439) | 4119439..4120821 | - | 1383 | WP_000834439.1 | glycoside-pentoside-hexuronide family transporter | - |
| F1745_RS20495 (4121506) | 4121506..4122687 | + | 1182 | WP_041124148.1 | tyrosine-type recombinase/integrase | - |
| F1745_RS20500 (4122897) | 4122897..4123200 | + | 304 | Protein_4015 | integrase | - |
| F1745_RS20505 (4124053) | 4124053..4124328 | + | 276 | WP_097764301.1 | helix-turn-helix transcriptional regulator | - |
| F1745_RS20510 (4124663) | 4124663..4125703 | + | 1041 | WP_096848740.1 | hypothetical protein | - |
| F1745_RS20515 (4126087) | 4126087..4127427 | + | 1341 | WP_170998396.1 | sensor domain-containing diguanylate cyclase | - |
| F1745_RS20520 (4127794) | 4127794..4128456 | - | 663 | WP_238013670.1 | EcsC family protein | - |
| F1745_RS20525 (4129032) | 4129032..4130570 | - | 1539 | WP_096848736.1 | IS66 family transposase ISEc8 | Transposase |
| F1745_RS20530 (4130620) | 4130620..4130967 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| F1745_RS20535 (4130964) | 4130964..4131344 | - | 381 | WP_021574195.1 | IS66 family transposase ISEc8 | Transposase |
| F1745_RS20540 (4132286) | 4132286..4132587 | + | 302 | Protein_4023 | integrase core domain-containing protein | - |
| F1745_RS20545 (4133018) | 4133018..4134309 | + | 1292 | Protein_4024 | MFS transporter | - |
| F1745_RS20550 (4134770) | 4134770..4136431 | - | 1662 | WP_096848731.1 | hypothetical protein | VF |
| F1745_RS20555 (4136484) | 4136484..4136681 | - | 198 | WP_052415657.1 | hypothetical protein | - |
| F1745_RS20560 (4136821) | 4136821..4137087 | - | 267 | WP_000766272.1 | YkgJ family cysteine cluster protein | - |
| F1745_RS20565 (4137084) | 4137084..4138655 | - | 1572 | WP_096848730.1 | cobalamin adenosyltransferase | - |
| F1745_RS20570 (4138702) | 4138702..4139781 | - | 1080 | WP_096848728.1 | chemotaxis protein | - |
| F1745_RS20575 (4139830) | 4139830..4140725 | - | 896 | Protein_4030 | WYL domain-containing protein | - |
| F1745_RS20580 (4141144) | 4141144..4141890 | - | 747 | WP_096848742.1 | invasion outer membrane protein Tia | - |
| F1745_RS20585 (4142113) | 4142113..4142278 | + | 166 | Protein_4032 | integrase | - |
| F1745_RS20590 (4142502) | 4142502..4144151 | + | 1650 | WP_096848727.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| F1745_RS20595 (4144156) | 4144156..4145481 | + | 1326 | WP_096848725.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| F1745_RS20600 (4145462) | 4145462..4150516 | + | 5055 | WP_238013688.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| F1745_RS20605 (4150554) | 4150554..4151072 | + | 519 | WP_157908430.1 | hypothetical protein | - |
| F1745_RS20610 (4151073) | 4151073..4152233 | + | 1161 | WP_096848723.1 | DNA phosphorothioation-associated DGQHR protein 1 | - |
| F1745_RS20615 (4152292) | 4152292..4152648 | - | 357 | WP_096848721.1 | DNA sulfur modification protein DndE | - |
| F1745_RS20620 (4152648) | 4152648..4154648 | - | 2001 | WP_096848720.1 | DNA sulfur modification protein DndD | - |
| F1745_RS20625 (4154638) | 4154638..4156271 | - | 1634 | Protein_4040 | DNA phosphorothioation system sulfurtransferase DndC | - |
| F1745_RS20630 (4156268) | 4156268..4157353 | - | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| F1745_RS20635 (4157666) | 4157666..4157859 | + | 194 | Protein_4042 | IS66 family transposase ISCro1 | Transposase |
| F1745_RS20640 (4157945) | 4157945..4158274 | + | 330 | WP_096848718.1 | hypothetical protein | - |
| F1745_RS20645 (4158261) | 4158261..4158653 | + | 393 | WP_096848717.1 | IS66 family transposase ISEc49 | Transposase |
| F1745_RS20650 (4158660) | 4158660..4160261 | + | 1602 | WP_096848715.1 | IS66 family transposase ISEc49 | Transposase |
| F1745_RS20655 (4160776) | 4160776..4160961 | - | 186 | Protein_4046 | IS66 family transposase ISEc47 | Transposase |
| F1745_RS20660 (4161213) | 4161213..4161497 | + | 285 | WP_096848713.1 | hypothetical protein | - |
| F1745_RS20665 (4161541) | 4161541..4161837 | + | 297 | WP_096848711.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| F1745_RS20670 (4161864) | 4161864..4162037 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| F1745_RS20675 (4162156) | 4162156..4163673 | - | 1518 | WP_238013691.1 | lysine--tRNA ligase | - |
| F1745_RS20680 (4163988) | 4163988..4166135 | - | 2148 | WP_238013694.1 | lysine decarboxylase | - |
| F1745_RS20685 (4166151) | 4166151..4167482 | - | 1332 | WP_096848882.1 | putrescine-ornithine antiporter | - |
| F1745_RS20690 (4167577) | 4167577..4169733 | - | 2157 | WP_163513387.1 | ornithine decarboxylase SpeF | - |
| F1745_RS20695 (4170043) | 4170043..4170147 | - | 105 | WP_212734261.1 | hypothetical protein | - |
| F1745_RS20700 (4170494) | 4170494..4170673 | - | 180 | WP_238013697.1 | hypothetical protein | - |
| F1745_RS20705 (4170816) | 4170816..4171022 | - | 207 | WP_238013700.1 | DUF596 domain-containing protein | - |
| F1745_RS20710 (4171019) | 4171019..4171174 | - | 156 | WP_238013703.1 | hypothetical protein | - |
| F1745_RS20715 (4171320) | 4171320..4172861 | + | 1542 | Protein_4058 | IS3 family transposase ISAs9 | Transposase |
| F1745_RS20720 (4172969) | 4172969..4173874 | - | 906 | WP_238013718.1 | VENN motif pre-toxin domain-containing protein | - |
| F1745_RS20725 (4173986) | 4173986..4174741 | - | 756 | WP_001522280.1 | IS21 family transposase ISEc10 | Transposase |
| F1745_RS20730 (4174738) | 4174738..4176236 | - | 1499 | Protein_4061 | IS21 family transposase ISEc10 | Transposase |
| F1745_RS20735 (4176324) | 4176324..4176518 | - | 195 | WP_238013721.1 | hypothetical protein | - |
| F1745_RS20740 (4176819) | 4176819..4177051 | - | 233 | Protein_4063 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|