MGE detailed information
MGE type: Genomic_island MGE length: 11788 bp
Accession: NZ_CP043825 Location: 3556708..3568495 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Accession: NZ_CP043825 Location: 3556708..3568495 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1745_RS17730 (3553033) | 3553033..3554241 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| F1745_RS17735 (3554267) | 3554267..3555598 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| F1745_RS17740 (3555620) | 3555620..3556609 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| F1745_RS17745 (3556708) | 3556708..3557646 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| F1745_RS17750 (3557961) | 3557961..3558179 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| F1745_RS17755 (3558435) | 3558435..3558974 | + | 540 | WP_000675745.1 | protein YhaB | - |
| F1745_RS17760 (3558996) | 3558996..3560183 | + | 1188 | WP_000484546.1 | YhaC family protein | - |
| F1745_RS17770 (3561319) | 3561319..3562464 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| F1745_RS17775 (3562561) | 3562561..3563451 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| F1745_RS17780 (3563481) | 3563481..3564251 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| F1745_RS17785 (3564267) | 3564267..3565601 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| F1745_RS17790 (3565976) | 3565976..3567547 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| F1745_RS17795 (3567696) | 3567696..3568031 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| F1745_RS17800 (3568031) | 3568031..3568495 | + | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| F1745_RS17805 (3568550) | 3568550..3569359 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| F1745_RS17810 (3569608) | 3569608..3570888 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| F1745_RS17815 (3570911) | 3570911..3571384 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| F1745_RS17820 (3571395) | 3571395..3572174 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| F1745_RS17825 (3572164) | 3572164..3573042 | + | 879 | WP_001315856.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| F1745_RS17830 (3573060) | 3573060..3573494 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|