MGE detailed information
MGE type: Prophage MGE length: 60572 bp
Accession: NZ_CP043825 Location: 2184751..2245322 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Accession: NZ_CP043825 Location: 2184751..2245322 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1745_RS11105 (2180191) | 2180191..2181549 | - | 1359 | WP_000826769.1 | two-component system sensor histidine kinase HprS | - |
| F1745_RS11110 (2181549) | 2181549..2182220 | - | 672 | WP_001362894.1 | response regulator transcription factor HprR | - |
| F1745_RS11115 (2182353) | 2182353..2182766 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| F1745_RS11120 (2182875) | 2182875..2183879 | + | 1005 | WP_000740094.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| F1745_RS11125 (2183880) | 2183880..2184515 | + | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| F1745_RS11130 (2184772) | 2184772..2185422 | + | 651 | WP_001007749.1 | metal-binding protein ZinT | - |
| F1745_RS11135 (2185765) | 2185765..2186295 | + | 531 | WP_001079074.1 | cytochrome b | - |
| F1745_RS11140 (2187272) | 2187272..2187856 | - | 585 | WP_106901682.1 | tail fiber assembly protein | - |
| F1745_RS11145 (2187856) | 2187856..2188800 | - | 945 | WP_238014099.1 | phage tail protein | - |
| F1745_RS11150 (2189839) | 2189839..2190180 | - | 342 | Protein_2188 | prophage tail fiber N-terminal domain-containing protein | - |
| F1745_RS11155 (2190245) | 2190245..2190844 | - | 600 | WP_001568881.1 | hypothetical protein | VF |
| F1745_RS11160 (2190912) | 2190912..2194307 | - | 3396 | WP_238014060.1 | host specificity protein J | - |
| F1745_RS11165 (2194368) | 2194368..2194940 | - | 573 | WP_000847704.1 | tail assembly protein | - |
| F1745_RS11170 (2194937) | 2194937..2195680 | - | 744 | WP_047088332.1 | C40 family peptidase | - |
| F1745_RS11175 (2195961) | 2195961..2196980 | - | 1020 | WP_096136371.1 | IS110 family transposase ISEc66 | Transposase |
| F1745_RS11180 (2197128) | 2197128..2197826 | - | 699 | WP_001152615.1 | phage minor tail protein L | - |
| F1745_RS11185 (2197826) | 2197826..2198155 | - | 330 | WP_000847379.1 | phage tail protein | - |
| F1745_RS11190 (2198152) | 2198152..2200713 | - | 2562 | WP_238014063.1 | phage tail tape measure protein | - |
| F1745_RS11195 (2200706) | 2200706..2201140 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| F1745_RS11200 (2201122) | 2201122..2201544 | - | 423 | WP_000479152.1 | phage minor tail protein G | - |
| F1745_RS11205 (2201560) | 2201560..2202300 | - | 741 | WP_238014066.1 | phage tail protein | - |
| F1745_RS11210 (2202308) | 2202308..2202703 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| F1745_RS11215 (2202700) | 2202700..2203278 | - | 579 | WP_032215172.1 | phage tail protein | - |
| F1745_RS11220 (2203290) | 2203290..2203643 | - | 354 | WP_001204540.1 | head-tail joining protein | - |
| F1745_RS11225 (2203636) | 2203636..2204010 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| F1745_RS11230 (2204062) | 2204062..2205090 | - | 1029 | WP_000522651.1 | major capsid protein | - |
| F1745_RS11235 (2205148) | 2205148..2205495 | - | 348 | WP_032215169.1 | head decoration protein | - |
| F1745_RS11240 (2205532) | 2205532..2207037 | - | 1506 | WP_032215167.1 | S49 family peptidase | - |
| F1745_RS11245 (2207027) | 2207027..2208619 | - | 1593 | WP_032215166.1 | phage portal protein | - |
| F1745_RS11250 (2208616) | 2208616..2208822 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| F1745_RS11255 (2208806) | 2208806..2210734 | - | 1929 | WP_032215165.1 | phage terminase large subunit family protein | - |
| F1745_RS11260 (2210706) | 2210706..2211254 | - | 549 | WP_001102147.1 | terminase small subunit | - |
| F1745_RS11265 (2211642) | 2211642..2211881 | + | 240 | WP_064757403.1 | YlcI/YnfO family protein | - |
| F1745_RS11270 (2212031) | 2212031..2212495 | - | 465 | WP_032215162.1 | lysis protein | - |
| F1745_RS11275 (2212492) | 2212492..2213025 | - | 534 | WP_032215161.1 | lysozyme | - |
| F1745_RS11280 (2213081) | 2213081..2213395 | - | 315 | WP_032215159.1 | DUF1327 domain-containing protein | - |
| F1745_RS11285 (2213388) | 2213388..2213615 | - | 228 | WP_032215174.1 | class II holin family protein | - |
| F1745_RS11290 (2213970) | 2213970..2214239 | - | 270 | WP_000756806.1 | hypothetical protein | VF |
| F1745_RS11295 (2214249) | 2214249..2215196 | - | 948 | WP_238014069.1 | hypothetical protein | VF |
| F1745_RS11300 (2215592) | 2215592..2215870 | + | 279 | WP_032215158.1 | hypothetical protein | - |
| F1745_RS11305 (2215984) | 2215984..2216802 | - | 819 | WP_047088253.1 | CPBP family intramembrane metalloprotease | - |
| F1745_RS11310 (2216953) | 2216953..2217324 | - | 372 | WP_000090268.1 | antiterminator Q family protein | - |
| F1745_RS11315 (2217314) | 2217314..2217685 | - | 372 | WP_032215155.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F1745_RS11320 (2217698) | 2217698..2218747 | - | 1050 | WP_032215154.1 | DUF968 domain-containing protein | - |
| F1745_RS11325 (2218749) | 2218749..2219021 | - | 273 | WP_047088255.1 | hypothetical protein | - |
| F1745_RS11330 (2219141) | 2219141..2219959 | - | 819 | WP_001094287.1 | hypothetical protein | - |
| F1745_RS11335 (2219962) | 2219962..2220168 | - | 207 | WP_000050565.1 | hypothetical protein | - |
| F1745_RS11340 (2220415) | 2220415..2220570 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| F1745_RS11345 (2220824) | 2220824..2221081 | - | 258 | WP_001176099.1 | hypothetical protein | - |
| F1745_RS11350 (2221220) | 2221220..2221735 | - | 516 | WP_047088257.1 | hypothetical protein | - |
| F1745_RS11355 (2221732) | 2221732..2221908 | - | 177 | WP_047088259.1 | hypothetical protein | - |
| F1745_RS11360 (2221901) | 2221901..2222083 | - | 183 | WP_047088260.1 | hypothetical protein | - |
| F1745_RS11365 (2222211) | 2222211..2222522 | - | 312 | WP_047088262.1 | hypothetical protein | - |
| F1745_RS11370 (2222715) | 2222715..2223011 | - | 297 | WP_047088264.1 | DUF4406 domain-containing protein | - |
| F1745_RS11375 (2223008) | 2223008..2223262 | - | 255 | WP_077756511.1 | DNA-binding protein | - |
| F1745_RS11380 (2223319) | 2223319..2224080 | - | 762 | WP_032214976.1 | DUF1627 domain-containing protein | - |
| F1745_RS11385 (2224103) | 2224103..2224849 | - | 747 | WP_032214975.1 | IS21 family transposase ISCARN58 | Transposase |
| F1745_RS11390 (2224856) | 2224856..2225821 | - | 966 | WP_032214974.1 | phage O protein family | - |
| F1745_RS11395 (2225802) | 2225802..2226323 | - | 522 | WP_032214973.1 | toxin YdaT family protein | - |
| F1745_RS11400 (2226307) | 2226307..2226585 | - | 279 | WP_032214972.1 | YdaS family helix-turn-helix protein | - |
| F1745_RS11405 (2226702) | 2226702..2227100 | + | 399 | WP_032214971.1 | helix-turn-helix domain-containing protein | - |
| F1745_RS11410 (2227130) | 2227130..2227318 | + | 189 | WP_032214970.1 | hypothetical protein | Antitoxin Detail |
| F1745_RS11415 (2227322) | 2227322..2227603 | + | 282 | WP_032214969.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F1745_RS11420 (2227890) | 2227890..2228045 | + | 156 | WP_047088278.1 | DUF1391 family protein | - |
| F1745_RS27630 (2228047) | 2228047..2228175 | + | 129 | WP_077756509.1 | protein YdfB | - |
| F1745_RS11425 (2228205) | 2228205..2228423 | + | 219 | WP_001171946.1 | protein YdfC | - |
| F1745_RS11430 (2228446) | 2228446..2228775 | + | 330 | WP_032214967.1 | hypothetical protein | - |
| F1745_RS11435 (2228744) | 2228744..2229019 | - | 276 | WP_000102679.1 | hypothetical protein | - |
| F1745_RS11440 (2229581) | 2229581..2229769 | + | 189 | WP_032214966.1 | cell division inhibition protein DicB | - |
| F1745_RS11445 (2229766) | 2229766..2229957 | + | 192 | WP_001070255.1 | DUF1482 family protein | - |
| F1745_RS11450 (2230051) | 2230051..2232492 | + | 2442 | WP_032214965.1 | exonuclease | - |
| F1745_RS11455 (2232551) | 2232551..2232754 | + | 204 | WP_000096346.1 | DUF4224 domain-containing protein | - |
| F1745_RS11460 (2232754) | 2232754..2233804 | + | 1051 | Protein_2251 | Tyrosine recombinase XerC ; Integrase | Integrase |
| F1745_RS11470 (2234014) | 2234014..2234811 | + | 798 | WP_001300307.1 | DgsA anti-repressor MtfA | - |
| F1745_RS11480 (2235301) | 2235301..2242377 | + | 7077 | WP_032214962.1 | inverse autotransporter adhesin YeeJ | - |
| F1745_RS11485 (2242639) | 2242639..2243691 | - | 1053 | WP_001542941.1 | glycosyltransferase family 9 protein | - |
| F1745_RS11490 (2244006) | 2244006..2245322 | + | 1317 | WP_000378564.1 | shikimate transporter | - |
| F1745_RS11495 (2245424) | 2245424..2246878 | + | 1455 | WP_001060244.1 | AMP nucleosidase | - |
| F1745_RS11500 (2247221) | 2247221..2247937 | + | 717 | WP_000532912.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| F1745_RS11510 (2248567) | 2248567..2250210 | - | 1644 | WP_122986595.1 | toxic metabolite efflux MATE transporter YeeO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|