MGE detailed information
MGE type: Prophage MGE length: 80135 bp
Accession: NZ_CP043825 Location: 2006504..2086638 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Accession: NZ_CP043825 Location: 2006504..2086638 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1745_RS10030 () | 2002360..2003160 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| F1745_RS10035 () | 2003173..2004024 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| F1745_RS10040 () | 2004079..2004537 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| F1745_RS10045 () | 2004966..2005532 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| F1745_RS10050 () | 2005529..2006338 | - | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| F1745_RS10055 () | 2006504..2006713 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| F1745_RS10060 () | 2006726..2006869 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| F1745_RS10065 () | 2007538..2007825 | - | 288 | WP_001006866.1 | YebO family protein | - |
| F1745_RS10070 () | 2007900..2008043 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| F1745_RS10075 () | 2008202..2008441 | + | 240 | WP_001211011.1 | YobH family protein | - |
| F1745_RS10080 () | 2008584..2009375 | - | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| F1745_RS10085 () | 2009552..2010925 | + | 1374 | WP_001127216.1 | MFS transporter | - |
| F1745_RS10090 () | 2010971..2011852 | - | 882 | WP_000984517.1 | protease HtpX | - |
| F1745_RS10095 () | 2012044..2014092 | - | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| F1745_RS10100 () | 2014112..2014810 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| F1745_RS10105 () | 2014907..2015404 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| F1745_RS10110 () | 2015534..2016816 | + | 1283 | Protein_1983 | membrane integrity lipid transport subunit YebS | - |
| F1745_RS10115 () | 2016785..2019418 | + | 2634 | WP_238014053.1 | hypothetical protein | VF |
| F1745_RS10120 () | 2019498..2020937 | + | 1440 | WP_001307251.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| F1745_RS10125 () | 2021055..2021291 | + | 237 | WP_001295499.1 | YebV family protein | - |
| F1745_RS10130 () | 2021396..2021587 | + | 192 | WP_001296140.1 | YebW family protein | - |
| F1745_RS10135 () | 2021588..2022244 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| F1745_RS10140 () | 2022709..2022837 | - | 129 | Protein_1989 | helix-turn-helix domain-containing protein | - |
| F1745_RS10145 () | 2022922..2023467 | + | 546 | WP_047087908.1 | serine acetyltransferase | - |
| F1745_RS10150 () | 2023478..2024050 | - | 573 | WP_047087910.1 | tail fiber assembly protein | - |
| F1745_RS10155 () | 2024050..2024694 | - | 645 | Protein_1992 | phage tail protein | - |
| F1745_RS10160 () | 2025147..2025827 | - | 681 | WP_047087916.1 | DUF2612 domain-containing protein | - |
| F1745_RS10165 () | 2025824..2027023 | - | 1200 | WP_097310668.1 | baseplate J/gp47 family protein | - |
| F1745_RS10170 () | 2027023..2027376 | - | 354 | WP_001270636.1 | hypothetical protein | - |
| F1745_RS10175 () | 2027376..2028128 | - | 753 | WP_069906256.1 | Gp138 family membrane-puncturing spike protein | - |
| F1745_RS10180 () | 2028188..2028427 | - | 240 | WP_000466689.1 | DUF4282 domain-containing protein | - |
| F1745_RS10185 () | 2028481..2028822 | - | 342 | WP_045177226.1 | hypothetical protein | - |
| F1745_RS10190 () | 2028826..2029886 | - | 1061 | Protein_1999 | hypothetical protein | - |
| F1745_RS10195 () | 2029889..2030191 | - | 303 | WP_061355750.1 | hypothetical protein | - |
| F1745_RS10200 () | 2030191..2030778 | - | 588 | WP_097310666.1 | hypothetical protein | - |
| F1745_RS10205 () | 2030778..2032766 | - | 1989 | WP_061355752.1 | hypothetical protein | - |
| F1745_RS10210 () | 2032756..2032932 | - | 177 | WP_023141050.1 | hypothetical protein | - |
| F1745_RS10215 () | 2032937..2033395 | - | 459 | WP_238014055.1 | hypothetical protein | - |
| F1745_RS10220 () | 2033399..2033839 | - | 441 | WP_000109249.1 | DUF3277 family protein | - |
| F1745_RS10225 () | 2033850..2034995 | - | 1146 | WP_000046931.1 | DUF3383 family protein | - |
| F1745_RS10230 () | 2034999..2035562 | - | 564 | WP_097310665.1 | hypothetical protein | - |
| F1745_RS10235 () | 2035537..2035926 | - | 390 | WP_001142480.1 | hypothetical protein | - |
| F1745_RS10240 () | 2035913..2036467 | - | 555 | WP_001475139.1 | hypothetical protein | - |
| F1745_RS10245 () | 2036464..2036871 | - | 408 | WP_001125665.1 | DUF4054 domain-containing protein | - |
| F1745_RS10250 () | 2036870..2037102 | + | 233 | Protein_2011 | hypothetical protein | - |
| F1745_RS10255 () | 2037099..2038040 | - | 942 | WP_000627479.1 | DUF2184 domain-containing protein | - |
| F1745_RS10260 () | 2038052..2038558 | - | 507 | WP_097310664.1 | hypothetical protein | - |
| F1745_RS10265 () | 2038562..2039782 | - | 1221 | WP_000873165.1 | DUF2213 domain-containing protein | - |
| F1745_RS10270 () | 2039797..2040531 | - | 735 | WP_097310663.1 | phage minor head protein | - |
| F1745_RS10275 () | 2040422..2041888 | - | 1467 | WP_097310662.1 | DUF1073 domain-containing protein | - |
| F1745_RS10280 () | 2041888..2043510 | - | 1623 | WP_080075633.1 | TerL protein | - |
| F1745_RS10285 () | 2043513..2044064 | - | 552 | WP_097310661.1 | terminase small subunit | - |
| F1745_RS10290 () | 2044084..2044632 | + | 549 | WP_000762846.1 | hypothetical protein | - |
| F1745_RS10295 () | 2044765..2044950 | - | 186 | WP_000113285.1 | hypothetical protein | - |
| F1745_RS10300 () | 2044931..2045209 | - | 279 | WP_225883618.1 | hypothetical protein | - |
| F1745_RS10305 () | 2045094..2045486 | - | 393 | WP_001311799.1 | DUF2570 domain-containing protein | - |
| F1745_RS10310 () | 2045470..2045946 | - | 477 | WP_097310660.1 | glycoside hydrolase family protein | - |
| F1745_RS10315 () | 2045950..2046291 | - | 342 | WP_000781789.1 | phage holin, lambda family | - |
| F1745_RS10320 () | 2046509..2046787 | + | 279 | WP_001519807.1 | hypothetical protein | - |
| F1745_RS10325 () | 2046773..2047003 | - | 231 | WP_021517983.1 | hypothetical protein | - |
| F1745_RS10330 () | 2047141..2047752 | - | 612 | WP_000211421.1 | ORF6N domain-containing protein | - |
| F1745_RS10335 () | 2048023..2048577 | - | 555 | WP_000640150.1 | DUF1133 family protein | - |
| F1745_RS10340 () | 2048574..2048864 | - | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| F1745_RS10345 () | 2048864..2049463 | - | 600 | WP_047087957.1 | DUF1367 family protein | - |
| F1745_RS10350 () | 2050025..2050180 | - | 156 | WP_000813258.1 | Hok/Gef family protein | - |
| F1745_RS10355 () | 2050471..2051106 | - | 636 | WP_047662220.1 | DUF551 domain-containing protein | - |
| F1745_RS10360 () | 2051103..2051312 | - | 210 | WP_000951710.1 | hypothetical protein | - |
| F1745_RS10365 () | 2051314..2051502 | - | 189 | WP_024174960.1 | hypothetical protein | - |
| F1745_RS10370 () | 2051794..2052150 | - | 357 | WP_000403783.1 | hypothetical protein | - |
| F1745_RS10375 () | 2052208..2052630 | - | 423 | WP_047087963.1 | DUF977 family protein | - |
| F1745_RS10380 () | 2052646..2053407 | - | 762 | WP_047087965.1 | DUF1627 domain-containing protein | - |
| F1745_RS10385 () | 2053430..2054176 | - | 747 | WP_047087966.1 | ATP-binding protein | - |
| F1745_RS10390 () | 2054183..2054964 | - | 782 | Protein_2039 | hypothetical protein | - |
| F1745_RS10395 () | 2055042..2055464 | - | 423 | WP_000702025.1 | toxin YdaT family protein | - |
| F1745_RS10400 () | 2055461..2055703 | - | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| F1745_RS10405 () | 2055800..2056219 | + | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| F1745_RS10410 () | 2056519..2056737 | + | 219 | WP_047087968.1 | hypothetical protein | - |
| F1745_RS10415 () | 2056703..2056897 | - | 195 | WP_001419881.1 | hypothetical protein | - |
| F1745_RS10420 () | 2057293..2057514 | + | 222 | WP_000560226.1 | killing protein KilR | - |
| F1745_RS10425 () | 2057514..2057684 | + | 171 | WP_097310669.1 | YdaE family protein | - |
| F1745_RS10430 () | 2057759..2058034 | + | 276 | WP_001417976.1 | hypothetical protein | - |
| F1745_RS10435 () | 2058134..2061283 | + | 3150 | WP_097310658.1 | exodeoxyribonuclease VIII | - |
| F1745_RS10440 () | 2061298..2062386 | + | 1089 | WP_047088016.1 | RecT family recombinase | - |
| F1745_RS10445 () | 2062450..2062644 | + | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| F1745_RS10450 () | 2062637..2062825 | + | 189 | WP_047087971.1 | DUF1187 family protein | - |
| - () | 2062643..2062821 | - | 179 | NuclAT_0 | - | - |
| - () | 2062643..2062821 | - | 179 | NuclAT_0 | - | - |
| - () | 2062643..2062821 | - | 179 | NuclAT_0 | - | - |
| - () | 2062643..2062821 | - | 179 | NuclAT_0 | - | - |
| F1745_RS10455 () | 2062932..2063213 | + | 282 | WP_001311878.1 | excisionase | - |
| F1745_RS10460 () | 2063179..2064255 | + | 1077 | WP_047087972.1 | hypothetical protein ; Integrase | Integrase |
| - | 2064386..2064620 | + | 235 | - | - | Antitoxin Detail |
| - | 2064387..2064490 | - | 104 | - | - | Toxin Detail |
| F1745_RS10465 () | 2064648..2064989 | - | 342 | WP_000976472.1 | YebY family protein | - |
| F1745_RS10470 () | 2065002..2065874 | - | 873 | WP_000879282.1 | copper homeostasis membrane protein CopD | - |
| F1745_RS10475 () | 2065878..2066252 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| F1745_RS10480 () | 2066391..2066621 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| F1745_RS10485 () | 2066723..2067379 | + | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| F1745_RS10490 () | 2067403..2068065 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| F1745_RS10495 () | 2068062..2070122 | - | 2061 | WP_000936936.1 | oligopeptidase B | - |
| F1745_RS10500 () | 2070331..2070990 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| F1745_RS10505 () | 2071317..2071673 | - | 357 | WP_001295500.1 | protein YebF | - |
| F1745_RS10510 () | 2071740..2072030 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| F1745_RS10515 () | 2072164..2073342 | + | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| F1745_RS10520 () | 2073398..2074039 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| F1745_RS10525 () | 2074076..2075887 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| F1745_RS10530 () | 2076122..2077597 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| F1745_RS10535 () | 2077935..2078804 | + | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| F1745_RS10540 () | 2078932..2080374 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| F1745_RS10545 () | 2080505..2081476 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| F1745_RS10550 () | 2081596..2082917 | - | 1322 | Protein_2071 | hypothetical protein | VF |
| F1745_RS10555 () | 2082933..2083865 | - | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| F1745_RS10560 () | 2083944..2084699 | + | 756 | WP_000202996.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| F1745_RS10565 () | 2084696..2085481 | + | 786 | WP_000571465.1 | hypothetical protein | VF |
| F1745_RS10570 () | 2085628..2086638 | - | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| F1745_RS10575 () | 2086647..2087258 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| F1745_RS10580 () | 2087397..2087462 | - | 66 | WP_001386853.1 | stress response small protein YobI | - |
| F1745_RS10585 () | 2087533..2088135 | + | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| F1745_RS10590 () | 2088137..2088658 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| F1745_RS10595 () | 2088693..2089433 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| F1745_RS10600 () | 2089462..2089914 | - | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|