MGE detailed information
MGE type: Genomic_island MGE length: 11340 bp
Accession: NZ_CP043821 Location: 3728254..3739593 Organism: Escherichia coli strain RM10740 Replicon: chromosome
Accession: NZ_CP043821 Location: 3728254..3739593 Organism: Escherichia coli strain RM10740 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1748_RS18465 (3724086) | 3724086..3725417 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| F1748_RS18470 (3725439) | 3725439..3726428 | - | 990 | WP_089516001.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| F1748_RS18475 (3726527) | 3726527..3727465 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| F1748_RS18480 (3727780) | 3727780..3727998 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| F1748_RS18485 (3728254) | 3728254..3728793 | + | 540 | WP_000675733.1 | protein YhaB | - |
| F1748_RS18490 (3728815) | 3728815..3730002 | + | 1188 | WP_000484603.1 | YhaC family protein | - |
| F1748_RS18495 (3730340) | 3730340..3731320 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| F1748_RS18505 (3732417) | 3732417..3733562 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| F1748_RS18510 (3733659) | 3733659..3734549 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| F1748_RS18515 (3734579) | 3734579..3735349 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| F1748_RS18520 (3735365) | 3735365..3736699 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| F1748_RS18525 (3737074) | 3737074..3738645 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| F1748_RS18530 (3738794) | 3738794..3739129 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| F1748_RS18535 (3739129) | 3739129..3739593 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| F1748_RS18540 (3739648) | 3739648..3740457 | - | 810 | WP_000072180.1 | aga operon transcriptional regulator AgaR | - |
| F1748_RS18545 (3740706) | 3740706..3741986 | + | 1281 | WP_000681947.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| F1748_RS18550 (3742009) | 3742009..3742482 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| F1748_RS18555 (3742493) | 3742493..3743272 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| F1748_RS18560 (3743262) | 3743262..3744140 | + | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| F1748_RS18565 (3744158) | 3744158..3744592 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|