MGE detailed information
MGE type: Prophage MGE length: 49153 bp
Accession: NZ_CP043821 Location: 1589816..1638968 Organism: Escherichia coli strain RM10740 Replicon: chromosome
Accession: NZ_CP043821 Location: 1589816..1638968 Organism: Escherichia coli strain RM10740 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1748_RS07870 (1585805) | 1585805..1585852 | + | 48 | WP_211180494.1 | protein YnaN | - |
| F1748_RS07875 (1585866) | 1585866..1586849 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| F1748_RS07880 (1587327) | 1587327..1588700 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| F1748_RS07885 (1588829) | 1588829..1589764 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| F1748_RS07890 (1589816) | 1589816..1591051 | - | 1236 | WP_072014550.1 | Putative defective protein IntQ ; Integrase | Integrase |
| F1748_RS07895 (1591053) | 1591053..1591268 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1591372) | 1591372..1591550 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1591372) | 1591372..1591550 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1591372) | 1591372..1591550 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1591372) | 1591372..1591550 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| F1748_RS07900 (1591368) | 1591368..1591556 | - | 189 | WP_032084364.1 | DUF1187 family protein | - |
| F1748_RS07905 (1591549) | 1591549..1591743 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| F1748_RS07910 (1591807) | 1591807..1592859 | - | 1053 | WP_001004422.1 | RecT family recombinase | - |
| F1748_RS07915 (1592871) | 1592871..1595942 | - | 3072 | WP_032084365.1 | exodeoxyribonuclease VIII | - |
| F1748_RS07920 (1596044) | 1596044..1596319 | - | 276 | WP_001516463.1 | phage protein | - |
| F1748_RS07925 (1596394) | 1596394..1596564 | - | 171 | WP_001516462.1 | YdaE family protein | - |
| F1748_RS07930 (1596564) | 1596564..1596785 | - | 222 | WP_000560220.1 | killing protein KilR | - |
| F1748_RS07935 (1597227) | 1597227..1597715 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| F1748_RS07940 (1597712) | 1597712..1597867 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| F1748_RS07945 (1597878) | 1597878..1598057 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| F1748_RS07950 (1598322) | 1598322..1598798 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| F1748_RS07955 (1598922) | 1598922..1599218 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| F1748_RS07960 (1599241) | 1599241..1599663 | + | 423 | WP_001605351.1 | toxin YdaT family protein | - |
| F1748_RS07965 (1599741) | 1599741..1600530 | + | 790 | Protein_1552 | hypothetical protein | - |
| F1748_RS07970 (1600537) | 1600537..1601283 | + | 747 | WP_000788969.1 | ATP-binding protein | - |
| F1748_RS07975 (1601306) | 1601306..1602067 | + | 762 | WP_024250660.1 | DUF1627 domain-containing protein | - |
| F1748_RS07980 (1602083) | 1602083..1602505 | + | 423 | WP_024250661.1 | DUF977 family protein | - |
| F1748_RS07985 (1602652) | 1602652..1603461 | - | 810 | WP_000161640.1 | hypothetical protein | - |
| F1748_RS07995 (1605440) | 1605440..1605778 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| F1748_RS08005 (1607369) | 1607369..1607968 | + | 600 | WP_024250592.1 | DUF1367 family protein | - |
| F1748_RS08010 (1607968) | 1607968..1608258 | + | 291 | WP_024250593.1 | DUF1364 domain-containing protein | - |
| F1748_RS08015 (1608255) | 1608255..1608797 | + | 543 | WP_000640139.1 | DUF1133 family protein | - |
| F1748_RS08030 (1609397) | 1609397..1609687 | + | 291 | WP_001578250.1 | hypothetical protein | - |
| F1748_RS08035 (1609966) | 1609966..1610181 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| F1748_RS08040 (1610181) | 1610181..1610678 | + | 498 | WP_001135277.1 | lysozyme RrrD | - |
| F1748_RS26540 (1610895) | 1610895..1611080 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| F1748_RS08055 (1611277) | 1611277..1612734 | + | 1458 | WP_001097893.1 | Trk system potassium transporter TrkG | - |
| F1748_RS26545 (1612872) | 1612872..1613663 | + | 792 | WP_001291093.1 | ParB/Srx family N-terminal domain-containing protein | - |
| F1748_RS08065 (1613656) | 1613656..1614588 | + | 933 | WP_001204028.1 | hypothetical protein | - |
| F1748_RS08070 (1614566) | 1614566..1614775 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| F1748_RS08075 (1614779) | 1614779..1615873 | + | 1095 | WP_032085165.1 | terminase small subunit | - |
| F1748_RS08080 (1615854) | 1615854..1617155 | + | 1302 | WP_089516118.1 | terminase family protein | - |
| F1748_RS08085 (1617158) | 1617158..1618564 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| F1748_RS08090 (1618548) | 1618548..1619660 | + | 1113 | WP_001363932.1 | phage minor head protein | - |
| F1748_RS08095 (1619765) | 1619765..1620529 | + | 765 | WP_032085166.1 | hypothetical protein | - |
| F1748_RS08100 (1620628) | 1620628..1621767 | + | 1140 | WP_000918487.1 | P22 phage major capsid protein family protein | - |
| F1748_RS08105 (1621810) | 1621810..1621986 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| F1748_RS08110 (1621990) | 1621990..1622385 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| F1748_RS08115 (1622385) | 1622385..1622768 | + | 384 | Protein_1579 | glutamate 5-kinase | - |
| F1748_RS08120 (1622769) | 1622769..1623149 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| F1748_RS08125 (1623146) | 1623146..1623538 | + | 393 | WP_001526972.1 | phage tail terminator-like protein | - |
| F1748_RS08130 (1623565) | 1623565..1624527 | + | 963 | WP_032085167.1 | phage tail tube protein | - |
| F1748_RS08135 (1624678) | 1624678..1625037 | + | 360 | WP_089631894.1 | hypothetical protein | - |
| F1748_RS08140 (1625510) | 1625510..1626046 | + | 537 | WP_032085169.1 | Attachment invasion locus protein | VF |
| F1748_RS08145 (1626113) | 1626113..1629346 | + | 3234 | WP_089516115.1 | phage tail tape measure protein | - |
| F1748_RS08150 (1629339) | 1629339..1629677 | + | 339 | WP_072014583.1 | phage tail protein | - |
| F1748_RS08155 (1629677) | 1629677..1630375 | + | 699 | WP_176271160.1 | phage minor tail protein L | - |
| F1748_RS08160 (1630380) | 1630380..1631123 | + | 744 | WP_089565138.1 | C40 family peptidase | - |
| F1748_RS08165 (1631087) | 1631087..1631662 | + | 576 | WP_238005165.1 | tail assembly protein | - |
| F1748_RS08170 (1631723) | 1631723..1635118 | + | 3396 | WP_238005090.1 | host specificity protein J | - |
| F1748_RS08175 (1635186) | 1635186..1635785 | + | 600 | WP_089516337.1 | Outer membrane protein X | VF |
| F1748_RS08180 (1635850) | 1635850..1637382 | + | 1533 | Protein_1592 | prophage tail fiber N-terminal domain-containing protein | - |
| F1748_RS08185 (1637434) | 1637434..1638381 | + | 948 | WP_265413640.1 | phage tail protein | - |
| F1748_RS08190 (1638381) | 1638381..1638968 | + | 588 | WP_089515940.1 | tail fiber assembly protein | - |
| F1748_RS08195 (1639038) | 1639038..1639367 | - | 330 | WP_032084732.1 | YkgJ family cysteine cluster protein | - |
| F1748_RS08200 (1639934) | 1639934..1640368 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| F1748_RS08205 (1640509) | 1640509..1641642 | - | 1134 | WP_089515942.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|