MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 55361 bp
Accession: NZ_CP043774 Location: 1..55361 Organism: Salmonella enterica strain QH Replicon: plasmid p1
Accession: NZ_CP043774 Location: 1..55361 Organism: Salmonella enterica strain QH Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1527_RS23745 () | 905..1597 | + | 693 | WP_001038509.1 | fimbrial chaperone PefD | - |
| F1527_RS23750 () | 1594..2173 | + | 580 | Protein_2 | hypothetical protein | - |
| F1527_RS23755 () | 2356..3210 | + | 855 | WP_149827191.1 | hypothetical protein | - |
| F1527_RS23760 () | 3471..3683 | + | 213 | WP_000004290.1 | transcriptional regulator PefI | - |
| F1527_RS23765 () | 3668..4003 | + | 336 | WP_149827187.1 | helix-turn-helix transcriptional regulator | - |
| F1527_RS23770 () | 4206..4604 | + | 399 | Protein_6 | YjiK family protein | - |
| F1527_RS23780 () | 5529..6410 | - | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| F1527_RS23785 () | 6391..6468 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| F1527_RS23790 () | 6718..6984 | - | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| F1527_RS23800 () | 7315..7767 | - | 453 | WP_000477660.1 | hypothetical protein | - |
| F1527_RS23805 () | 7884..8447 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| F1527_RS23810 () | 8502..9242 | - | 741 | WP_000177630.1 | conjugal transfer pilus acetylase TraX | - |
| F1527_RS23815 () | 9262..14441 | - | 5180 | Protein_13 | conjugative transfer relaxase/helicase TraI | - |
| F1527_RS23820 () | 14523..14750 | + | 228 | WP_000450263.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| F1527_RS23825 () | 14750..15148 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| F1527_RS23830 () | 15157..17346 | - | 2190 | WP_149827189.1 | type IV conjugative transfer system coupling protein TraD | - |
| F1527_RS23835 () | 17718..18449 | - | 732 | WP_000782436.1 | complement resistance protein TraT | - |
| F1527_RS23840 () | 18752..18994 | - | 243 | WP_000632200.1 | hypothetical protein | - |
| F1527_RS23845 () | 18991..19692 | - | 702 | WP_148201696.1 | hypothetical protein | - |
| F1527_RS23850 () | 19994..20416 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| F1527_RS23855 () | 20416..21690 | + | 1275 | WP_000457543.1 | Y-family DNA polymerase | - |
| F1527_RS23860 () | 21772..22746 | - | 975 | WP_000064275.1 | ParB/RepB/Spo0J family partition protein | - |
| F1527_RS23865 () | 22746..23951 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| F1527_RS23870 () | 24366..25307 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| F1527_RS23875 () | 25339..25905 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| F1527_RS23880 () | 25962..26297 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| F1527_RS23885 () | 26481..26897 | - | 417 | WP_041030921.1 | hypothetical protein | - |
| F1527_RS23890 () | 26983..28098 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| F1527_RS23895 () | 28543..28845 | + | 303 | WP_014411932.1 | hypothetical protein | - |
| F1527_RS23905 () | 29500..30240 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| F1527_RS23910 () | 30447..31007 | + | 561 | WP_001240330.1 | recombinase family protein | - |
| F1527_RS23915 () | 30991..32655 | + | 1665 | WP_000098782.1 | IS481 family transposase | - |
| F1527_RS23920 () | 32588..33613 | + | 1026 | WP_077906346.1 | ExeA family protein | - |
| F1527_RS23925 () | 33802..34839 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| F1527_RS23930 () | 35447..36340 | + | 894 | WP_000346689.1 | virulence genes transcriptional activator SpvR | - |
| F1527_RS23935 () | 36514..36678 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| F1527_RS23940 () | 36852..37619 | + | 768 | WP_001541537.1 | virulence protein SpvA | - |
| F1527_RS24200 () | 37582..37749 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| F1527_RS23945 () | 37801..39576 | + | 1776 | WP_015899537.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| F1527_RS23950 () | 39857..40576 | + | 720 | WP_001122239.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| F1527_RS23955 () | 40837..41487 | + | 651 | WP_015899538.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| F1527_RS23960 () | 41614..42039 | - | 426 | WP_000064919.1 | IS200/IS605 family transposase | - |
| F1527_RS23965 () | 42096..42446 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| F1527_RS23970 () | 42513..43072 | - | 560 | Protein_44 | inverse autotransporter beta domain-containing protein | - |
| F1527_RS23975 () | 43792..44277 | - | 486 | WP_000905606.1 | membrane protein | - |
| F1527_RS23980 () | 44271..44780 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| F1527_RS23990 () | 44784..45497 | - | 714 | Protein_47 | EAL domain-containing protein | - |
| F1527_RS23995 () | 45506..46288 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| F1527_RS24000 () | 46301..46843 | - | 543 | WP_000198609.1 | hypothetical protein | - |
| F1527_RS24005 () | 46840..47130 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| F1527_RS24010 () | 47132..47437 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| F1527_RS24015 () | 47439..47657 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| F1527_RS24020 () | 48333..48854 | + | 522 | WP_011264020.1 | hypothetical protein | - |
| F1527_RS24205 () | 48898..49326 | - | 429 | Protein_54 | hypothetical protein | - |
| F1527_RS24030 () | 49338..49633 | + | 296 | Protein_55 | cytoplasmic protein | - |
| F1527_RS24035 () | 50127..51116 | + | 990 | WP_000461383.1 | RepB family plasmid replication initiator protein | - |
| F1527_RS24040 () | 51234..51395 | - | 162 | WP_001541548.1 | hypothetical protein | - |
| F1527_RS24045 () | 51448..51834 | - | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| F1527_RS24210 () | 52201..52512 | - | 312 | WP_015899541.1 | hypothetical protein | - |
| F1527_RS24055 () | 52541..52843 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| F1527_RS24060 () | 53118..53636 | + | 519 | WP_000748207.1 | major pilin PefA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|