MGE detailed information
MGE type: Conjugative plasmid MGE length: 103693 bp
Accession: NZ_CP043583 Location: 1..103693 Organism: Klebsiella pneumoniae strain SCKP020018 Replicon: plasmid pCTX15_020018
Accession: NZ_CP043583 Location: 1..103693 Organism: Klebsiella pneumoniae strain SCKP020018 Replicon: plasmid pCTX15_020018
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6M74_RS27855 (C6M74_28215) | 19..894 | + | 876 | WP_004098982.1 | replication initiation protein | - |
| C6M74_RS27860 (C6M74_28220) | 1567..2193 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| C6M74_RS27865 | 2190..2492 | + | 303 | WP_004197636.1 | hypothetical protein | - |
| C6M74_RS27870 (C6M74_28230) | 2948..3742 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| C6M74_RS27875 (C6M74_28235) | 3940..4956 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| C6M74_RS27880 (C6M74_28240) | 4967..5281 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| C6M74_RS27885 (C6M74_28245) | 5308..5703 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| C6M74_RS27890 (C6M74_28250) | 5872..6177 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6M74_RS27895 (C6M74_28255) | 6179..6397 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6M74_RS27900 (C6M74_28275) | 7215..7505 | - | 291 | WP_013023783.1 | hypothetical protein | - |
| C6M74_RS27905 (C6M74_28280) | 7502..8629 | - | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| C6M74_RS27910 (C6M74_28285) | 8663..10255 | - | 1593 | WP_015344964.1 | hypothetical protein | - |
| C6M74_RS27915 (C6M74_28290) | 10462..11241 | - | 780 | WP_013023780.1 | hypothetical protein | - |
| C6M74_RS27920 (C6M74_28295) | 11254..11754 | - | 501 | WP_013023779.1 | HEPN family nuclease | - |
| C6M74_RS27925 (C6M74_28300) | 12029..12292 | + | 264 | WP_013023778.1 | hypothetical protein | - |
| C6M74_RS27930 (C6M74_28305) | 12289..12855 | + | 567 | WP_013023777.1 | hypothetical protein | - |
| C6M74_RS27935 (C6M74_28310) | 12886..13380 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| C6M74_RS27940 (C6M74_28315) | 13424..13792 | + | 369 | WP_048337418.1 | hypothetical protein | - |
| C6M74_RS27945 (C6M74_28320) | 13826..14029 | + | 204 | WP_004098931.1 | HHA domain-containing protein | - |
| C6M74_RS27950 (C6M74_28325) | 14078..14335 | + | 258 | WP_017899889.1 | hypothetical protein | - |
| C6M74_RS27955 (C6M74_28330) | 14411..14665 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| C6M74_RS27960 (C6M74_28335) | 14801..15577 | - | 777 | WP_013609504.1 | DUF2971 domain-containing protein | - |
| C6M74_RS27965 (C6M74_28340) | 15818..16141 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| C6M74_RS27970 (C6M74_28345) | 16320..16589 | - | 270 | Protein_23 | SOS response-associated peptidase family protein | - |
| C6M74_RS27975 (C6M74_28355) | 16725..16892 | + | 168 | Protein_24 | IS5/IS1182 family transposase | - |
| C6M74_RS27980 (C6M74_28360) | 16948..17097 | + | 150 | Protein_25 | IS110 family transposase | - |
| C6M74_RS27985 (C6M74_28365) | 17380..18561 | + | 1182 | WP_013023770.1 | DUF4268 domain-containing protein | - |
| C6M74_RS27990 (C6M74_28380) | 19753..20610 | - | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| C6M74_RS28000 (C6M74_28390) | 20912..21181 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| C6M74_RS28005 (C6M74_28395) | 21299..21808 | - | 510 | WP_052145515.1 | Phospholipase D | VF |
| C6M74_RS28010 (C6M74_28400) | 21982..23559 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| C6M74_RS28015 (C6M74_28405) | 23883..24587 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C6M74_RS28020 (C6M74_28410) | 24586..25290 | + | 705 | Protein_32 | class A beta-lactamase | - |
| C6M74_RS28025 (C6M74_28415) | 25549..26025 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| C6M74_RS28030 (C6M74_28420) | 26072..26947 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| C6M74_RS28035 (C6M74_28425) | 27282..27476 | - | 195 | Protein_35 | IS1380 family transposase | - |
| C6M74_RS28040 (C6M74_28430) | 27533..28230 | + | 698 | WP_223216367.1 | IS1 family transposase IS1G | Transposase |
| C6M74_RS28045 (C6M74_28435) | 28247..28519 | - | 273 | Protein_37 | IS1380 family transposase ISEcp1 | Transposase |
| C6M74_RS28050 (C6M74_28440) | 28758..29500 | + | 743 | Protein_38 | ISKra4 family transposase ISKpn19 | Transposase |
| C6M74_RS28055 (C6M74_28445) | 29533..29961 | + | 429 | Protein_39 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| C6M74_RS28060 (C6M74_28450) | 30280..30936 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| C6M74_RS28065 (C6M74_28455) | 31218..32609 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| C6M74_RS28070 (C6M74_28460) | 32646..33218 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| C6M74_RS28075 (C6M74_28465) | 33355..33900 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| C6M74_RS28080 (C6M74_28470) | 33996..34571 | + | 576 | WP_077256884.1 | DUF4113 domain-containing protein | - |
| C6M74_RS28085 (C6M74_28475) | 34718..34999 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| C6M74_RS28090 (C6M74_28480) | 34980..35309 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6M74_RS28095 (C6M74_28485) | 35545..35802 | + | 258 | WP_048337415.1 | hypothetical protein | - |
| C6M74_RS28100 (C6M74_28490) | 35836..36540 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C6M74_RS28105 (C6M74_28495) | 36728..37036 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| C6M74_RS28110 (C6M74_28500) | 37033..37683 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| C6M74_RS28115 (C6M74_28505) | 37739..38383 | - | 645 | WP_014343481.1 | hypothetical protein | - |
| C6M74_RS28120 (C6M74_28510) | 38433..39035 | - | 603 | WP_187358056.1 | PIN domain-containing protein | - |
| C6M74_RS28125 (C6M74_28515) | 39196..39789 | - | 594 | WP_013609537.1 | fertility inhibition protein FinO | - |
| C6M74_RS28130 (C6M74_28520) | 39861..40586 | - | 726 | WP_013023834.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C6M74_RS28135 (C6M74_28525) | 40667..45928 | - | 5262 | WP_047665818.1 | Multifunctional conjugation protein TraI | Relaxase |
| C6M74_RS28140 (C6M74_28530) | 45928..48240 | - | 2313 | WP_013023832.1 | type IV conjugative transfer system coupling protein TraD | - |
| C6M74_RS28145 | 48367..49056 | - | 690 | WP_013023831.1 | hypothetical protein | - |
| C6M74_RS28150 (C6M74_28540) | 49249..49980 | - | 732 | WP_013023830.1 | conjugal transfer complement resistance protein TraT | - |
| C6M74_RS28155 (C6M74_28545) | 50166..50699 | - | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| C6M74_RS28160 (C6M74_28550) | 50702..53551 | - | 2850 | WP_013609534.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| C6M74_RS28165 (C6M74_28555) | 53551..54930 | - | 1380 | WP_014343487.1 | conjugal transfer pilus assembly protein TraH | - |
| C6M74_RS28170 (C6M74_28560) | 54908..55351 | - | 444 | WP_013023828.1 | F-type conjugal transfer protein TrbF | - |
| C6M74_RS28175 (C6M74_28565) | 55397..55954 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C6M74_RS28180 (C6M74_28570) | 55926..56165 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C6M74_RS28185 (C6M74_28575) | 56176..56928 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C6M74_RS28190 (C6M74_28580) | 56949..57275 | - | 327 | WP_015632512.1 | hypothetical protein | - |
| C6M74_RS28195 (C6M74_28585) | 57288..57536 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| C6M74_RS28200 (C6M74_28590) | 57514..57768 | - | 255 | WP_032433943.1 | conjugal transfer protein TrbE | - |
| C6M74_RS28205 (C6M74_28595) | 57800..59755 | - | 1956 | WP_015065533.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C6M74_RS28210 (C6M74_28600) | 59814..60461 | - | 648 | WP_015632510.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C6M74_RS28215 (C6M74_28605) | 60737..61726 | - | 990 | WP_015632509.1 | conjugal transfer pilus assembly protein TraU | - |
| C6M74_RS28220 (C6M74_28610) | 61723..62124 | - | 402 | WP_004194979.1 | hypothetical protein | - |
| C6M74_RS28225 (C6M74_28615) | 62159..62794 | - | 636 | WP_047670041.1 | type-F conjugative transfer system protein TraW | - |
| C6M74_RS28230 (C6M74_28620) | 62794..63183 | - | 390 | WP_015632507.1 | type-F conjugative transfer system protein TrbI | - |
| C6M74_RS28235 (C6M74_28625) | 63183..65822 | - | 2640 | WP_015632506.1 | type IV secretion system protein TraC | - |
| C6M74_RS28240 (C6M74_28630) | 65894..66292 | - | 399 | WP_199855344.1 | hypothetical protein | - |
| C6M74_RS28245 (C6M74_28640) | 66668..67072 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| C6M74_RS28250 (C6M74_28645) | 67139..67450 | - | 312 | WP_015344986.1 | hypothetical protein | - |
| C6M74_RS28255 (C6M74_28650) | 67451..67669 | - | 219 | WP_015344987.1 | hypothetical protein | - |
| C6M74_RS28260 (C6M74_28655) | 67775..68185 | - | 411 | WP_009309869.1 | hypothetical protein | - |
| C6M74_RS28265 (C6M74_28660) | 68317..68901 | - | 585 | WP_013023822.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C6M74_RS28270 (C6M74_28665) | 69015..70439 | - | 1425 | WP_004194260.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| C6M74_RS28275 (C6M74_28670) | 70439..71179 | - | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| C6M74_RS28280 (C6M74_28675) | 71166..71732 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| C6M74_RS28285 (C6M74_28680) | 71752..72057 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| C6M74_RS28290 (C6M74_28685) | 72071..72439 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| C6M74_RS28655 (C6M74_28690) | 72508..72708 | - | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| C6M74_RS28295 (C6M74_28695) | 72794..73495 | - | 702 | WP_004194113.1 | hypothetical protein | - |
| C6M74_RS28300 (C6M74_28700) | 73725..74117 | - | 393 | WP_004194114.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| C6M74_RS28305 (C6M74_28705) | 74549..75034 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| C6M74_RS28310 (C6M74_28710) | 75067..75396 | - | 330 | WP_011977736.1 | DUF5983 family protein | - |
| C6M74_RS28315 (C6M74_28715) | 75429..76250 | - | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| C6M74_RS28320 (C6M74_28725) | 77058..78266 | + | 1209 | WP_015344990.1 | IS256 family transposase ISEic2 | Transposase |
| C6M74_RS28325 (C6M74_28730) | 78402..78815 | - | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| C6M74_RS28330 (C6M74_28735) | 78816..79094 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| C6M74_RS28335 (C6M74_28740) | 79084..79404 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6M74_RS28340 (C6M74_28745) | 79485..79709 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| C6M74_RS28345 (C6M74_28750) | 79720..79932 | - | 213 | WP_013023815.1 | hypothetical protein | - |
| C6M74_RS28350 (C6M74_28755) | 79993..80349 | - | 357 | WP_013023814.1 | hypothetical protein | - |
| C6M74_RS28355 (C6M74_28765) | 81191..81508 | - | 318 | WP_013023810.1 | hypothetical protein | - |
| C6M74_RS28360 (C6M74_28770) | 81523..81873 | - | 351 | WP_013023809.1 | hypothetical protein | - |
| C6M74_RS28365 (C6M74_28775) | 81870..82142 | - | 273 | WP_014343506.1 | hypothetical protein | - |
| C6M74_RS28370 (C6M74_28785) | 82835..82954 | - | 120 | WP_159376494.1 | type I toxin-antitoxin system Hok family toxin | - |
| C6M74_RS28375 | 82899..83051 | - | 153 | WP_004150508.1 | DUF5431 family protein | - |
| C6M74_RS28380 (C6M74_28795) | 83221..83595 | - | 375 | WP_047665807.1 | hypothetical protein | - |
| C6M74_RS28385 (C6M74_28800) | 83651..83977 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| C6M74_RS28390 (C6M74_28805) | 83974..84702 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| C6M74_RS28395 (C6M74_28810) | 84699..85130 | - | 432 | WP_013023806.1 | conjugation system SOS inhibitor PsiB | - |
| C6M74_RS28400 (C6M74_28815) | 85175..87232 | - | 2058 | WP_013023805.1 | ParB/RepB/Spo0J family partition protein | - |
| C6M74_RS28405 (C6M74_28820) | 87302..87550 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| C6M74_RS28410 (C6M74_28825) | 87599..88141 | - | 543 | WP_015344994.1 | single-stranded DNA-binding protein | - |
| C6M74_RS28415 (C6M74_28840) | 88971..89534 | - | 564 | WP_004152756.1 | methyltransferase | - |
| C6M74_RS28420 (C6M74_28845) | 89582..90937 | - | 1356 | WP_015344996.1 | DUF3560 domain-containing protein | - |
| C6M74_RS28425 (C6M74_28850) | 90989..91219 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| C6M74_RS28430 (C6M74_28855) | 91311..91538 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| C6M74_RS28435 (C6M74_28870) | 92218..92538 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| C6M74_RS28440 (C6M74_28875) | 92573..92827 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| C6M74_RS28445 (C6M74_28880) | 93015..93206 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| C6M74_RS28450 (C6M74_28885) | 93249..93755 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| C6M74_RS28455 (C6M74_28890) | 93798..94226 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| C6M74_RS28460 (C6M74_28895) | 94907..95674 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| C6M74_RS28465 (C6M74_28900) | 95728..96147 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| C6M74_RS28470 (C6M74_28905) | 96157..96378 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| C6M74_RS28475 (C6M74_28910) | 96378..97079 | - | 702 | WP_001568041.1 | DNA methylase | - |
| C6M74_RS28480 | 97151..97320 | - | 170 | Protein_125 | hypothetical protein | - |
| C6M74_RS28485 (C6M74_28915) | 97516..97746 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| C6M74_RS28490 (C6M74_28920) | 97810..98481 | - | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| C6M74_RS28495 (C6M74_28925) | 98484..99455 | - | 972 | WP_001568038.1 | plasmid segregation protein ParM | - |
| C6M74_RS28500 (C6M74_28930) | 99704..101191 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| C6M74_RS28505 (C6M74_28940) | 101598..102029 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6M74_RS28510 (C6M74_28945) | 102029..103300 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|