MGE detailed information
MGE type: IScluster/Tn MGE length: 42315 bp
Accession: NZ_CP043575 Location: 559420..601734 Organism: Comamonas koreensis strain T50-37 Replicon: chromosome
Accession: NZ_CP043575 Location: 559420..601734 Organism: Comamonas koreensis strain T50-37 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F0Q04_RS02590 () | 558107..558915 | + | 809 | WP_182345530.1 | IS5 family transposase | - |
| F0Q04_RS02600 () | 560979..561260 | + | 282 | WP_182344323.1 | hypothetical protein | - |
| F0Q04_RS02605 () | 561318..561653 | + | 336 | WP_182344325.1 | hypothetical protein | - |
| F0Q04_RS02610 () | 561680..562642 | + | 963 | WP_182344327.1 | hypothetical protein | - |
| F0Q04_RS02615 () | 562663..562959 | + | 297 | WP_182283343.1 | ATP-dependent Clp protease ATP-binding subunit ClpE | VF |
| F0Q04_RS02620 () | 563032..563313 | + | 282 | WP_182283342.1 | hypothetical protein | - |
| F0Q04_RS02625 () | 563335..563508 | + | 174 | WP_182283341.1 | hypothetical protein | - |
| F0Q04_RS02630 () | 563965..564669 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| F0Q04_RS02635 () | 564722..565519 | - | 798 | Protein_514 | IS91 family transposase ISAzo26 | Transposase |
| F0Q04_RS02640 () | 565680..566234 | + | 555 | WP_003159191.1 | aminoglycoside N-acetyltransferase AAC(6')-Ib4 | - |
| F0Q04_RS02645 () | 566307..566561 | - | 255 | WP_032492620.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| F0Q04_RS02650 () | 566558..566809 | - | 252 | WP_032492621.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| F0Q04_RS02655 () | 566983..567537 | + | 555 | WP_014454105.1 | Spore protein YkvP | ARG |
| F0Q04_RS02660 () | 567642..568894 | + | 1253 | Protein_519 | Spore protein YkvP | ARG |
| F0Q04_RS02665 () | 568992..569819 | + | 828 | WP_014386432.1 | Spore germination protein YaaH | ARG |
| F0Q04_RS02670 () | 569867..570340 | + | 474 | WP_071846295.1 | trimethoprim-resistant dihydrofolate reductase DfrA1 | - |
| F0Q04_RS02675 () | 570532..570879 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| F0Q04_RS02680 () | 570873..571844 | + | 972 | WP_054065446.1 | dihydropteroate synthase | - |
| F0Q04_RS02685 () | 572061..573275 | + | 1215 | WP_182344330.1 | Multidrug resistance protein MdtL | ARG |
| F0Q04_RS02690 () | 573441..576326 | - | 2886 | WP_182344332.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| F0Q04_RS02695 () | 576452..577120 | + | 669 | WP_023434504.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| F0Q04_RS02700 () | 577132..577935 | + | 804 | WP_001082319.1 | Sporulation protein YkvU | ARG |
| F0Q04_RS02705 () | 577935..578771 | + | 837 | WP_000480968.1 | Sporulation thiol-disulfide oxidoreductase A | ARG |
| F0Q04_RS02710 () | 578895..578960 | + | 66 | WP_173361396.1 | hypothetical protein | - |
| F0Q04_RS02715 () | 578957..579583 | - | 627 | WP_000163574.1 | tetracycline resistance transcriptional repressor TetR(G) | - |
| F0Q04_RS02720 () | 579687..580862 | + | 1176 | WP_001257840.1 | Multidrug resistance protein MdtG | ARG |
| F0Q04_RS02725 () | 580883..581674 | + | 792 | WP_001253717.1 | LysR family transcriptional regulator | - |
| F0Q04_RS02730 () | 581766..583298 | - | 1533 | WP_001747814.1 | IS91 family transposase ISVsa3 | Transposase |
| F0Q04_RS02735 () | 583525..583986 | - | 462 | WP_074424383.1 | Catabolite control protein B | VF |
| F0Q04_RS02745 () | 584280..585131 | + | 852 | WP_031966051.1 | hypothetical protein | ARG |
| F0Q04_RS02750 () | 585259..585759 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| F0Q04_RS02755 () | 585865..586317 | - | 453 | Protein_537 | TniB family NTP-binding protein | - |
| F0Q04_RS02760 () | 586320..587264 | - | 945 | Protein_538 | IS3 family transposase ISNoc1 | Transposase |
| F0Q04_RS02765 () | 587338..588141 | - | 804 | WP_182343973.1 | IS21 family transposase ISAlde2 | Transposase |
| F0Q04_RS02770 () | 588131..589657 | - | 1527 | WP_182343975.1 | IS21 family transposase ISAlde1 | Transposase |
| F0Q04_RS02775 () | 589767..590507 | - | 741 | Protein_541 | Spore photoproduct lyase ; Integrase | Integrase |
| F0Q04_RS02785 () | 590643..590819 | + | 177 | WP_182344334.1 | hypothetical protein | - |
| F0Q04_RS02790 () | 590903..591709 | - | 807 | WP_198424359.1 | hypothetical protein | ARG |
| F0Q04_RS02795 () | 591729..592538 | - | 810 | WP_011205809.1 | hypothetical protein | - |
| F0Q04_RS02800 () | 592616..592927 | - | 312 | WP_011205808.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| F0Q04_RS02805 () | 592924..593175 | - | 252 | WP_011205807.1 | antitoxin ParD | - |
| F0Q04_RS02810 () | 593593..594606 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| F0Q04_RS02815 () | 594902..595294 | + | 393 | WP_182344336.1 | hypothetical protein | - |
| F0Q04_RS02820 () | 595318..595791 | + | 474 | WP_000777554.1 | trimethoprim-resistant dihydrofolate reductase DfrA1 | - |
| F0Q04_RS02825 () | 595884..596675 | + | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| F0Q04_RS02830 () | 596839..597186 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| F0Q04_RS02835 () | 597180..598019 | + | 840 | WP_000259032.1 | Putative N-acetyl-LL-diaminopimelate aminotransferase | ARG |
| F0Q04_RS02840 () | 598147..598647 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| F0Q04_RS02850 () | 599154..599918 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| F0Q04_RS02855 () | 599970..600425 | + | 456 | Protein_555 | universal stress protein | - |
| F0Q04_RS02860 () | 600442..600777 | + | 336 | WP_011518936.1 | molecular chaperone DnaK | - |
| F0Q04_RS02865 () | 600853..601734 | - | 882 | Protein_557 | IS1182 family transposase ISBusp4 | Transposase |
| F0Q04_RS02870 () | 603079..604101 | - | 1023 | WP_182344338.1 | hypothetical protein | - |
| F0Q04_RS02880 () | 605498..605860 | - | 363 | WP_021027174.1 | HPF/RaiA family ribosome-associated protein | - |
| F0Q04_RS02885 () | 606139..606699 | - | 561 | WP_182344340.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|