MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68338 bp
Accession: NZ_CP043572 Location: 1..68338 Organism: Pseudomonas migulae strain R1-9 Replicon: plasmid unnamed
Accession: NZ_CP043572 Location: 1..68338 Organism: Pseudomonas migulae strain R1-9 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F0Q00_RS26305 () | 1030..1716 | + | 687 | WP_082149916.1 | hypothetical protein | - |
| F0Q00_RS26310 () | 1746..1958 | + | 213 | WP_048377561.1 | hypothetical protein | - |
| F0Q00_RS26315 () | 1951..2340 | + | 390 | WP_048377560.1 | hypothetical protein | - |
| F0Q00_RS26320 () | 2328..3188 | + | 861 | WP_048377559.1 | type IV secretion system protein | - |
| F0Q00_RS26325 () | 3188..3853 | + | 666 | WP_048377558.1 | type IV secretion system protein | - |
| F0Q00_RS26330 () | 3881..4660 | + | 780 | WP_053070063.1 | Type IV secretion system protein virB9 | VF |
| F0Q00_RS26335 () | 4663..5922 | + | 1260 | WP_048377557.1 | Type IV secretion system protein PtlG | VF |
| F0Q00_RS26340 () | 5932..6960 | + | 1029 | WP_048377556.1 | Type IV secretion system protein VirB11 | VF |
| F0Q00_RS26345 () | 6944..7858 | + | 915 | WP_198422831.1 | Type IV secretion system protein virB1 | VF |
| F0Q00_RS26350 () | 7888..8214 | + | 327 | WP_053070061.1 | hypothetical protein | - |
| F0Q00_RS26355 () | 8204..8551 | + | 348 | Protein_11 | endonuclease | - |
| F0Q00_RS26360 () | 8627..9730 | - | 1104 | WP_009682427.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| F0Q00_RS26365 () | 9727..10800 | - | 1074 | WP_009682426.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| F0Q00_RS26370 () | 10987..12099 | - | 1113 | WP_019410170.1 | DUF2817 domain-containing protein | - |
| F0Q00_RS26375 () | 12123..12890 | - | 768 | WP_009682424.1 | Histidine transport ATP-binding protein HisP | VF |
| F0Q00_RS26380 () | 12918..13631 | - | 714 | WP_009682423.1 | ABC transporter permease | - |
| F0Q00_RS26385 () | 13628..14317 | - | 690 | WP_009682422.1 | histidine ABC transporter permease HisQ | - |
| F0Q00_RS26390 () | 14434..15204 | - | 771 | WP_009682421.1 | ABC transporter substrate-binding protein | - |
| F0Q00_RS26400 () | 16834..17763 | + | 930 | WP_009682420.1 | LysR family transcriptional regulator | - |
| F0Q00_RS26405 () | 17770..18385 | - | 616 | Protein_21 | LysR family transcriptional regulator | - |
| F0Q00_RS26410 () | 18415..21350 | - | 2936 | Protein_22 | Multifunctional conjugation protein TraI | Relaxase |
| F0Q00_RS26415 () | 21361..22824 | - | 1464 | WP_086799849.1 | type IV secretion system DNA-binding domain-containing protein | - |
| F0Q00_RS26420 () | 22914..23300 | - | 387 | WP_048377551.1 | hypothetical protein | - |
| F0Q00_RS26425 () | 23730..24182 | + | 453 | WP_048377550.1 | hypothetical protein | - |
| F0Q00_RS26430 () | 24179..24901 | + | 723 | WP_048377549.1 | hypothetical protein | - |
| F0Q00_RS26435 () | 24907..25296 | + | 390 | WP_048377548.1 | hypothetical protein | - |
| F0Q00_RS26440 () | 25430..26224 | + | 795 | WP_048377547.1 | SprT-like domain-containing protein | - |
| F0Q00_RS26445 () | 26955..29921 | - | 2967 | WP_003090772.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| F0Q00_RS26450 () | 29925..30485 | - | 561 | WP_003090771.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| F0Q00_RS26455 () | 30860..31873 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| F0Q00_RS26460 () | 32026..32466 | + | 441 | WP_052285801.1 | aminoglycoside 6'-N-acetyltransferase AacA34 | - |
| F0Q00_RS26465 () | 32682..33941 | + | 1260 | WP_001256773.1 | Bicyclomycin resistance protein | ARG |
| F0Q00_RS26470 () | 34034..34825 | + | 792 | WP_025672409.1 | Streptomycin 3''-adenylyltransferase | ARG |
| F0Q00_RS26475 () | 34989..35336 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| F0Q00_RS26480 () | 35330..36301 | + | 972 | WP_000259026.1 | dihydropteroate synthase | - |
| F0Q00_RS26485 () | 36518..37732 | + | 1215 | WP_000214125.1 | Inner membrane transport protein YdhC | ARG |
| F0Q00_RS26490 () | 37826..37942 | + | 117 | Protein_38 | DUF3363 domain-containing protein | - |
| F0Q00_RS26495 () | 37939..38565 | - | 627 | WP_000163574.1 | tetracycline resistance transcriptional repressor TetR(G) | - |
| F0Q00_RS26500 () | 38669..39844 | + | 1176 | WP_001257840.1 | Tetracycline resistance protein, class C | ARG |
| F0Q00_RS26505 () | 39865..40656 | + | 792 | WP_001253717.1 | LysR family transcriptional regulator | - |
| F0Q00_RS26510 () | 40748..42280 | - | 1533 | WP_001747814.1 | IS91 family transposase ISVsa3 | Transposase |
| F0Q00_RS26515 () | 42507..42860 | - | 354 | Protein_43 | 60 kDa chaperonin | VF |
| F0Q00_RS26520 () | 42861..43160 | - | 300 | Protein_44 | 60 kDa chaperonin | VF |
| F0Q00_RS26525 () | 43262..44113 | + | 852 | WP_000946487.1 | Dihydropteroate synthase | ARG |
| F0Q00_RS26530 () | 44241..44741 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| F0Q00_RS26540 () | 45248..46012 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| F0Q00_RS26545 () | 46067..48826 | + | 2760 | Protein_48 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| F0Q00_RS26550 () | 48889..50376 | - | 1488 | WP_003090759.1 | SulP family inorganic anion transporter | - |
| F0Q00_RS26560 () | 50933..51697 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| F0Q00_RS26565 () | 51737..51892 | - | 156 | WP_182344849.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| F0Q00_RS26570 () | 52018..52632 | + | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| F0Q00_RS26575 () | 52698..53501 | + | 804 | WP_010794532.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| F0Q00_RS26580 () | 53501..54337 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| F0Q00_RS26585 () | 54446..55285 | + | 840 | WP_026014172.1 | universal stress protein | - |
| F0Q00_RS26590 () | 55285..55644 | + | 360 | WP_003090764.1 | TraR/DksA family transcriptional regulator | - |
| F0Q00_RS26595 () | 55690..56652 | + | 963 | WP_010794530.1 | SdiA-regulated domain-containing protein | - |
| F0Q00_RS26600 () | 56922..57167 | - | 246 | WP_182344851.1 | hypothetical protein | - |
| F0Q00_RS26605 () | 57450..57767 | - | 318 | WP_070414885.1 | hypothetical protein | - |
| F0Q00_RS26610 () | 57821..58279 | - | 459 | WP_182344853.1 | hypothetical protein | - |
| F0Q00_RS26615 () | 58334..59167 | - | 834 | WP_182344854.1 | DUF945 domain-containing protein | - |
| F0Q00_RS26620 () | 59346..59648 | + | 303 | WP_182344856.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F0Q00_RS26625 () | 59645..59938 | + | 294 | WP_032901693.1 | putative addiction module antidote protein | Antitoxin Detail |
| F0Q00_RS26630 () | 60711..60854 | + | 144 | Protein_64 | helix-turn-helix domain-containing protein | - |
| F0Q00_RS26635 () | 61054..61605 | - | 552 | WP_177031928.1 | helix-turn-helix domain-containing protein | - |
| F0Q00_RS26640 () | 62136..62759 | - | 624 | WP_182344859.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| F0Q00_RS26645 () | 62983..63333 | - | 351 | WP_048377565.1 | ParR | - |
| F0Q00_RS26650 () | 63330..64238 | - | 909 | WP_048377564.1 | ParB/RepB/Spo0J family partition protein | - |
| F0Q00_RS26655 () | 64249..65016 | - | 768 | WP_048377563.1 | Sporulation initiation inhibitor protein Soj | VF |
| F0Q00_RS26660 () | 65931..66401 | + | 471 | WP_053070065.1 | TrbC/VirB2 family protein | - |
| F0Q00_RS26665 () | 66398..66697 | + | 300 | WP_082149917.1 | VirB3 family type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|