MGE detailed information
MGE type: Integron MGE length: 22411 bp
Accession: NZ_CP043556 Location: 957478..979888 Organism: Vibrio cholerae strain RFB16 Replicon: chromosome
Accession: NZ_CP043556 Location: 957478..979888 Organism: Vibrio cholerae strain RFB16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F0316_RS18335 () | 952926..953084 | + | 159 | WP_149560875.1 | DUF645 family protein | - |
| F0316_RS18340 () | 953296..953655 | + | 360 | WP_149560804.1 | VOC family protein | - |
| F0316_RS18350 () | 954176..955096 | + | 921 | WP_149560805.1 | IS5-like element ISVch8 family transposase | - |
| F0316_RS18355 () | 955168..955344 | + | 177 | WP_149560806.1 | GNAT family acetyltransferase | - |
| F0316_RS18360 () | 955401..955484 | + | 84 | WP_149560876.1 | acetyltransferase | - |
| F0316_RS18365 () | 955487..956116 | + | 630 | WP_001009012.1 | type B-5 chloramphenicol O-acetyltransferase CatB9 | - |
| F0316_RS18375 () | 956367..957407 | + | 1041 | WP_057569038.1 | IS481 family transposase | - |
| F0316_RS18380 () | 957478..957777 | - | 300 | WP_057563739.1 | hypothetical protein | - |
| F0316_RS18395 () | 958600..959640 | - | 1041 | WP_057569038.1 | IS481 family transposase ISVvu4 | Transposase |
| F0316_RS18400 () | 959730..960041 | - | 312 | WP_149560809.1 | hypothetical protein | - |
| F0316_RS18405 () | 960194..960643 | - | 450 | WP_001026799.1 | GyrI-like domain-containing protein | - |
| F0316_RS18410 () | 960630..960844 | - | 215 | Protein_820 | DUF3265 domain-containing protein | - |
| F0316_RS18415 () | 960777..961220 | - | 444 | WP_011150490.1 | GNAT family N-acetyltransferase | - |
| F0316_RS18420 () | 961557..961736 | - | 180 | WP_149560810.1 | DUF3709 domain-containing protein | - |
| F0316_RS18425 () | 961733..961950 | - | 218 | Protein_823 | DUF3709 domain-containing protein | - |
| F0316_RS18430 () | 962007..962780 | - | 774 | WP_149560811.1 | DUF4145 domain-containing protein | - |
| F0316_RS18435 () | 962837..963190 | - | 354 | WP_172626102.1 | nuclear transport factor 2 family protein | - |
| F0316_RS18440 () | 963425..963604 | - | 180 | WP_149560812.1 | DUF645 family protein | - |
| F0316_RS18450 () | 963900..964292 | - | 393 | WP_055052334.1 | nuclear transport factor 2 family protein | - |
| F0316_RS18455 () | 964443..965096 | - | 654 | WP_057573342.1 | hypothetical protein | - |
| F0316_RS18460 () | 965249..965611 | - | 363 | WP_172626085.1 | DUF4144 domain-containing protein | - |
| F0316_RS18465 () | 965722..966138 | - | 417 | WP_027694820.1 | DUF1311 domain-containing protein | - |
| F0316_RS18475 () | 966299..966898 | - | 600 | WP_000777735.1 | porin family protein | - |
| F0316_RS18480 () | 967066..967623 | - | 558 | WP_149560813.1 | hypothetical protein | - |
| F0316_RS18485 () | 967834..968076 | + | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| F0316_RS18490 () | 968073..968372 | + | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F0316_RS18500 () | 968489..969022 | - | 534 | WP_055035881.1 | GNAT family N-acetyltransferase | - |
| F0316_RS18510 () | 969249..969701 | + | 453 | WP_000024294.1 | DUF2384 domain-containing protein | - |
| F0316_RS18515 () | 969701..970171 | + | 471 | WP_000784954.1 | RES family NAD+ phosphorylase | - |
| F0316_RS18520 () | 970195..970311 | - | 117 | WP_080387445.1 | DUF3265 domain-containing protein | - |
| F0316_RS18525 () | 970313..970765 | - | 453 | WP_032469029.1 | hypothetical protein | - |
| F0316_RS18530 () | 970917..971192 | - | 276 | WP_032473764.1 | hypothetical protein | - |
| F0316_RS18535 () | 971401..971583 | - | 183 | WP_149560814.1 | DUF645 family protein | - |
| F0316_RS18545 () | 971877..972632 | - | 756 | WP_149560816.1 | FRG domain-containing protein | - |
| F0316_RS18550 () | 972707..972991 | - | 285 | WP_119781300.1 | hypothetical protein | - |
| F0316_RS18555 () | 973138..973746 | - | 609 | WP_149560817.1 | hypothetical protein | - |
| F0316_RS18560 () | 974134..974955 | - | 822 | WP_114773437.1 | hypothetical protein | - |
| F0316_RS18565 () | 975227..975463 | - | 237 | WP_059261233.1 | DUF3709 domain-containing protein | - |
| F0316_RS18570 () | 975481..975675 | - | 195 | Protein_847 | DUF3709 domain-containing protein | - |
| F0316_RS18575 () | 975863..976096 | - | 234 | WP_042990080.1 | DUF3709 domain-containing protein | - |
| F0316_RS18580 () | 976392..976634 | - | 243 | WP_149560818.1 | hypothetical protein | - |
| F0316_RS18585 () | 976841..977206 | - | 366 | WP_000969534.1 | hypothetical protein | - |
| F0316_RS18590 () | 977349..977984 | - | 636 | WP_095474051.1 | hypothetical protein | - |
| F0316_RS18595 () | 978266..978493 | - | 228 | WP_172626103.1 | DUF3709 domain-containing protein | - |
| F0316_RS18605 () | 978604..979407 | - | 804 | WP_149560819.1 | hypothetical protein | - |
| F0316_RS18610 () | 979646..979888 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| F0316_RS18615 () | 979907..980227 | + | 321 | WP_172626086.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| F0316_RS18620 () | 980341..981381 | - | 1041 | WP_057569038.1 | IS481 family transposase | - |
| F0316_RS18625 () | 981561..982025 | - | 465 | WP_057563740.1 | hypothetical protein | - |
| F0316_RS19915 () | 982586..982696 | + | 111 | Protein_858 | DUF645 family protein | - |
| F0316_RS18640 () | 983025..983246 | + | 222 | WP_033839066.1 | DUF3709 domain-containing protein | - |
| F0316_RS18650 () | 983542..983928 | + | 387 | WP_000703159.1 | VOC family protein | - |
| F0316_RS18655 () | 984066..984566 | + | 501 | WP_000686370.1 | NAD(P)H-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|