MGE detailed information
MGE type: Conjugative plasmid MGE length: 82910 bp
Accession: NZ_CP043544 Location: 1..82910 Organism: Escherichia coli strain F2_81 Replicon: plasmid pF2_18C_FIB
Accession: NZ_CP043544 Location: 1..82910 Organism: Escherichia coli strain F2_81 Replicon: plasmid pF2_18C_FIB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPH39_RS24560 (CPH39_24965) | 1..978 | + | 978 | WP_000361617.1 | RepB family plasmid replication initiator protein | - |
| CPH39_RS24565 (CPH39_24970) | 1262..2002 | - | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| CPH39_RS24570 (CPH39_24975) | 2126..2245 | - | 120 | Protein_2 | serine/threonine protein kinase | - |
| CPH39_RS26700 | 2317..2579 | + | 263 | Protein_3 | epoxyqueuosine reductase QueH | - |
| CPH39_RS24580 (CPH39_24985) | 2789..3142 | - | 354 | WP_001368923.1 | hypothetical protein | - |
| CPH39_RS24585 (CPH39_24990) | 3366..3545 | + | 180 | WP_000526860.1 | hypothetical protein | VF |
| CPH39_RS24590 (CPH39_24995) | 3794..4231 | + | 438 | WP_000273579.1 | hypothetical protein | - |
| CPH39_RS24595 (CPH39_25000) | 4353..4610 | + | 258 | Protein_7 | IS3 family transposase IS911 | Transposase |
| CPH39_RS24600 (CPH39_25005) | 4677..5828 | + | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| CPH39_RS24605 (CPH39_25010) | 5838..5987 | + | 150 | Protein_9 | IS3 family transposase | - |
| CPH39_RS26705 | 5982..6134 | - | 153 | Protein_10 | hypothetical protein | - |
| CPH39_RS24610 (CPH39_25015) | 6172..6381 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| CPH39_RS24615 (CPH39_25020) | 6427..6888 | - | 462 | WP_001233850.1 | thermonuclease family protein | - |
| CPH39_RS24620 (CPH39_25025) | 7133..7345 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| CPH39_RS24625 (CPH39_25030) | 7478..8038 | - | 561 | WP_000840467.1 | fertility inhibition protein FinO | - |
| CPH39_RS24630 (CPH39_25035) | 8141..9001 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| CPH39_RS24635 (CPH39_25040) | 9060..9806 | - | 747 | WP_000205763.1 | conjugal transfer pilus acetylase TraX | - |
| CPH39_RS24640 (CPH39_25045) | 9826..15096 | - | 5271 | WP_096220705.1 | Multifunctional conjugation protein TraI | Relaxase |
| CPH39_RS24645 (CPH39_25050) | 15096..17249 | - | 2154 | WP_096220706.1 | type IV conjugative transfer system coupling protein TraD | - |
| CPH39_RS24650 (CPH39_25060) | 17502..18233 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| CPH39_RS24655 (CPH39_25065) | 18265..18768 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| CPH39_RS24660 (CPH39_25070) | 18783..21604 | - | 2822 | Protein_21 | conjugal transfer mating pair stabilization protein TraG | - |
| CPH39_RS24665 (CPH39_25075) | 21601..22485 | - | 885 | Protein_22 | conjugal transfer protein TraH | - |
| CPH39_RS24675 (CPH39_25085) | 23855..24244 | - | 390 | WP_001172748.1 | cytochrome b562 | - |
| CPH39_RS24680 (CPH39_25090) | 24288..26498 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| CPH39_RS24690 (CPH39_25105) | 28517..31177 | + | 2661 | WP_000770130.1 | Metalloprotease StcE | VF |
| CPH39_RS24695 (CPH39_25110) | 31261..32136 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| CPH39_RS24700 (CPH39_25115) | 32137..34107 | + | 1971 | WP_001368872.1 | Type II secretion system protein D | VF |
| CPH39_RS24705 (CPH39_25120) | 34104..35606 | + | 1503 | WP_001368867.1 | Type II secretion system protein E | VF |
| CPH39_RS24710 (CPH39_25125) | 35608..36831 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| CPH39_RS24715 (CPH39_25130) | 36862..37296 | + | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| CPH39_RS24720 (CPH39_25135) | 37293..37844 | + | 552 | WP_096220699.1 | type II secretion system minor pseudopilin GspH | - |
| CPH39_RS24725 (CPH39_25140) | 37859..38206 | + | 348 | WP_024173653.1 | Type II secretion system protein I | VF |
| CPH39_RS24730 (CPH39_25145) | 38203..38802 | + | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| CPH39_RS24735 (CPH39_25150) | 38799..39776 | + | 978 | WP_000842182.1 | Putative type II secretion system protein K | VF |
| CPH39_RS24740 (CPH39_25155) | 39710..40987 | + | 1278 | WP_012816828.1 | Type II secretion system protein L | VF |
| CPH39_RS24745 (CPH39_25160) | 40974..41489 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| CPH39_RS24750 (CPH39_25165) | 41658..42374 | + | 717 | WP_101981710.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CPH39_RS24755 (CPH39_25170) | 42468..42869 | + | 402 | WP_001222322.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| CPH39_RS24760 (CPH39_25175) | 42995..43138 | + | 144 | Protein_41 | IS3 family transposase IS1203 | Transposase |
| CPH39_RS24765 (CPH39_25185) | 43451..43744 | + | 294 | Protein_42 | hypothetical protein | - |
| CPH39_RS24770 (CPH39_25190) | 43973..44221 | + | 249 | WP_044864812.1 | replication regulatory protein RepA | - |
| CPH39_RS24775 (CPH39_25200) | 44466..44540 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CPH39_RS24780 (CPH39_25205) | 44533..45366 | + | 834 | WP_033809053.1 | incFII family plasmid replication initiator RepA | - |
| CPH39_RS24785 | 46068..46226 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| CPH39_RS24790 (CPH39_25220) | 46281..46550 | + | 270 | WP_000079945.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| CPH39_RS24795 (CPH39_25225) | 46550..46828 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| CPH39_RS24800 (CPH39_25230) | 47064..48251 | - | 1188 | WP_096220698.1 | IS91 family transposase ISEc37 | Transposase |
| CPH39_RS24805 (CPH39_25235) | 48436..49649 | + | 1214 | WP_220541910.1 | IS3 family transposase IS629 | Transposase |
| CPH39_RS24810 (CPH39_25245) | 51110..51931 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| CPH39_RS24815 (CPH39_25250) | 51931..53037 | + | 1107 | WP_000975742.1 | glycosyltransferase family 4 protein | - |
| CPH39_RS24820 (CPH39_25255) | 53127..54848 | + | 1722 | WP_000550558.1 | phosphoethanolamine transferase CptA | - |
| CPH39_RS24825 (CPH39_25260) | 54922..55920 | + | 999 | WP_077625898.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CPH39_RS24830 (CPH39_25265) | 56105..56365 | + | 261 | WP_001443645.1 | transposase | - |
| CPH39_RS24840 (CPH39_25280) | 57870..58223 | + | 354 | WP_000864811.1 | colicin M immunity protein | - |
| CPH39_RS24845 (CPH39_25285) | 58273..58434 | - | 162 | Protein_58 | lipid II-degrading bacteriocin | - |
| CPH39_RS26710 | 58434..58559 | - | 126 | Protein_59 | hypothetical protein | - |
| CPH39_RS24850 (CPH39_25290) | 58626..60065 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| CPH39_RS24855 (CPH39_25295) | 60069..62189 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| CPH39_RS24860 (CPH39_25300) | 62239..65235 | - | 2997 | WP_000217740.1 | Hemolysin, chromosomal | VF |
| CPH39_RS24865 (CPH39_25305) | 65237..65752 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| CPH39_RS24870 (CPH39_25315) | 66186..67399 | + | 1214 | WP_162830753.1 | IS3 family transposase IS629 | Transposase |
| CPH39_RS26715 (CPH39_25325) | 67443..67577 | - | 135 | Protein_65 | conjugal transfer protein TraJ | - |
| CPH39_RS24875 (CPH39_25330) | 67764..68147 | - | 384 | WP_094312267.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CPH39_RS24880 (CPH39_25335) | 68477..69070 | + | 594 | WP_001368852.1 | hypothetical protein | VF |
| CPH39_RS24885 (CPH39_25340) | 69191..70528 | - | 1338 | WP_094312392.1 | IS4 family transposase ISCro3 | Transposase |
| CPH39_RS24890 (CPH39_25345) | 70807..71624 | - | 818 | Protein_69 | DUF945 domain-containing protein | - |
| CPH39_RS24895 (CPH39_25350) | 71743..72029 | - | 287 | Protein_70 | hypothetical protein | - |
| CPH39_RS24900 (CPH39_25355) | 72054..72260 | - | 207 | WP_000275847.1 | hypothetical protein | - |
| CPH39_RS24905 (CPH39_25370) | 72806..72997 | - | 192 | WP_001024839.1 | hypothetical protein | - |
| CPH39_RS24910 (CPH39_25375) | 72994..73416 | - | 423 | WP_000271758.1 | DUF1380 family protein | - |
| CPH39_RS24915 (CPH39_25380) | 73463..73864 | - | 402 | WP_001198905.1 | antirestriction protein | - |
| CPH39_RS24920 | 74281..75057 | - | 777 | WP_176477226.1 | hypothetical protein | - |
| CPH39_RS24925 (CPH39_25395) | 75103..75589 | - | 487 | Protein_76 | DUF1380 domain-containing protein | - |
| CPH39_RS24930 (CPH39_25400) | 75549..75770 | - | 222 | WP_001104880.1 | hypothetical protein | - |
| CPH39_RS24935 (CPH39_25405) | 75771..76454 | - | 684 | WP_000085940.1 | DNA methylase | - |
| CPH39_RS24940 (CPH39_25415) | 76531..76836 | - | 306 | WP_032163448.1 | hypothetical protein | - |
| CPH39_RS24945 (CPH39_25420) | 76840..77257 | - | 418 | Protein_80 | hypothetical protein | - |
| CPH39_RS24950 (CPH39_25425) | 77180..78300 | + | 1121 | Protein_81 | DUF4113 domain-containing protein | - |
| CPH39_RS24955 (CPH39_25430) | 78441..79403 | - | 963 | WP_000756329.1 | ParB family protein | - |
| CPH39_RS24960 (CPH39_25435) | 79400..80605 | - | 1206 | WP_000817643.1 | Plasmid partition protein A | VF |
| CPH39_RS24965 | 80976..81149 | + | 174 | WP_001435278.1 | hypothetical protein | - |
| CPH39_RS24970 (CPH39_25450) | 81323..81574 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CPH39_RS24975 (CPH39_25455) | 81571..81858 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CPH39_RS24980 (CPH39_25460) | 81860..82265 | + | 406 | Protein_87 | integrase core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|