MGE detailed information
MGE type: Prophage MGE length: 55214 bp
Accession: NZ_CP043542 Location: 665001..720214 Organism: Escherichia coli strain F2_81 Replicon: chromosome
Accession: NZ_CP043542 Location: 665001..720214 Organism: Escherichia coli strain F2_81 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPH39_RS03165 (660149) | 660149..663241 | - | 3093 | WP_040234979.1 | beta-galactosidase subunit alpha | - |
| CPH39_RS03170 (663425) | 663425..664408 | - | 984 | WP_053883098.1 | transcriptional regulator EbgR | - |
| CPH39_RS03175 (664627) | 664627..664959 | + | 333 | WP_000450588.1 | tRNA-binding protein | - |
| CPH39_RS03180 (665001) | 665001..666380 | - | 1380 | WP_001297164.1 | Putrescine aminotransferase | VF |
| CPH39_RS03185 (666798) | 666798..668318 | + | 1521 | WP_000094712.1 | hypothetical protein | VF |
| CPH39_RS03190 (668425) | 668425..669048 | - | 624 | WP_000018005.1 | DNA-binding transcriptional regulator NfeR | - |
| CPH39_RS03195 (669336) | 669336..670100 | + | 765 | WP_053883099.1 | NADPH-dependent ferric chelate reductase NfeF | - |
| CPH39_RS03200 (670397) | 670397..671713 | + | 1317 | WP_000290292.1 | hypothetical protein ; Integrase | Integrase |
| CPH39_RS03205 (671843) | 671843..672439 | + | 597 | WP_000268404.1 | hypothetical protein | - |
| CPH39_RS03210 (672522) | 672522..674126 | - | 1605 | WP_000256686.1 | hypothetical protein | - |
| CPH39_RS03215 (674905) | 674905..675132 | + | 228 | WP_000265817.1 | AlpA family phage regulatory protein | - |
| CPH39_RS03220 (675195) | 675195..675941 | + | 747 | WP_001371780.1 | hypothetical protein | - |
| CPH39_RS03225 (676163) | 676163..676723 | + | 561 | WP_000135717.1 | hypothetical protein | - |
| CPH39_RS03230 (677112) | 677112..677726 | + | 615 | WP_000628304.1 | inovirus Gp2 family protein | - |
| CPH39_RS03235 (677754) | 677754..678320 | + | 567 | WP_000287890.1 | inovirus-type Gp2 protein | - |
| CPH39_RS03240 (678435) | 678435..678512 | + | 78 | Protein_637 | transposase domain-containing protein | - |
| CPH39_RS03245 (678524) | 678524..679243 | - | 720 | Protein_638 | IS3 family transposase IS2 | Transposase |
| CPH39_RS03250 (679298) | 679298..680511 | + | 1214 | WP_162830753.1 | IS3 family transposase IS629 | Transposase |
| CPH39_RS03255 (680646) | 680646..680987 | + | 342 | Protein_640 | IS66 family transposase ISEc43 | Transposase |
| CPH39_RS03260 (681007) | 681007..681522 | - | 516 | WP_096220684.1 | HNH endonuclease signature motif containing protein | - |
| CPH39_RS03265 (681940) | 681940..682716 | + | 777 | WP_001564126.1 | hypothetical protein | - |
| CPH39_RS03270 (683038) | 683038..683217 | - | 180 | Protein_643 | transposase domain-containing protein | - |
| CPH39_RS03275 (683372) | 683372..684979 | - | 1608 | WP_000134227.1 | type I restriction-modification system subunit M | - |
| CPH39_RS03280 (684976) | 684976..686136 | - | 1161 | WP_000836927.1 | AAA family ATPase | - |
| CPH39_RS03285 (686133) | 686133..687404 | - | 1272 | WP_001564125.1 | restriction endonuclease subunit S | - |
| CPH39_RS03290 (687586) | 687586..690558 | - | 2973 | WP_000108146.1 | type I restriction endonuclease subunit R | - |
| CPH39_RS03300 (693024) | 693024..693206 | - | 183 | WP_000283011.1 | hypothetical protein | - |
| CPH39_RS03305 (693537) | 693537..694409 | + | 873 | WP_001069706.1 | GTPase family protein | - |
| CPH39_RS03310 (694781) | 694781..697630 | + | 2850 | WP_000820559.1 | calcium-binding autotransporter Cah | - |
| CPH39_RS03315 (697958) | 697958..698775 | + | 818 | Protein_652 | DUF945 domain-containing protein | - |
| CPH39_RS03320 (698867) | 698867..699352 | + | 486 | WP_000206663.1 | antirestriction protein | - |
| CPH39_RS03325 (699368) | 699368..699844 | + | 477 | WP_001186706.1 | RadC family protein | - |
| CPH39_RS03330 (699907) | 699907..700128 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CPH39_RS03335 (700202) | 700202..700570 | + | 369 | WP_220541894.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| CPH39_RS03340 (700660) | 700660..701034 | + | 375 | WP_001094452.1 | TA system toxin CbtA family protein | Toxin Detail |
| CPH39_RS03345 (701031) | 701031..701522 | + | 492 | WP_130069251.1 | DUF5983 family protein | - |
| CPH39_RS03350 (701534) | 701534..701731 | + | 198 | WP_000772035.1 | DUF957 domain-containing protein | - |
| CPH39_RS03355 (701828) | 701828..702673 | + | 846 | WP_001290261.1 | DUF4942 domain-containing protein | - |
| CPH39_RS03365 (702972) | 702972..703478 | + | 507 | WP_000228941.1 | G/U mismatch-specific DNA glycosylase | - |
| CPH39_RS03370 (703583) | 703583..704911 | + | 1329 | WP_053884740.1 | IS4 family transposase IS4 | Transposase |
| CPH39_RS03375 (704988) | 704988..706829 | - | 1842 | WP_000437371.1 | RNA polymerase sigma factor RpoD | - |
| CPH39_RS03380 (707024) | 707024..708769 | - | 1746 | WP_053883100.1 | DNA primase | - |
| CPH39_RS03385 (708880) | 708880..709095 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| CPH39_RS03390 (709333) | 709333..710346 | + | 1014 | WP_053883101.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| CPH39_RS03395 (710389) | 710389..711852 | - | 1464 | WP_044186486.1 | L-tartrate/succinate antiporter | - |
| CPH39_RS03400 (711901) | 711901..712506 | - | 606 | WP_000722945.1 | L(+)-tartrate dehydratase subunit beta | - |
| CPH39_RS03405 (712503) | 712503..713414 | - | 912 | WP_000986807.1 | L(+)-tartrate dehydratase subunit alpha | - |
| CPH39_RS03410 (713621) | 713621..714553 | + | 933 | WP_000935206.1 | DNA-binding transcriptional activator TtdR | - |
| CPH39_RS03415 (714566) | 714566..715183 | - | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| CPH39_RS03420 (715288) | 715288..715656 | + | 369 | WP_053883102.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| CPH39_RS03425 (715747) | 715747..716568 | + | 822 | WP_001281927.1 | undecaprenyl-diphosphate phosphatase | - |
| CPH39_RS03430 (716749) | 716749..717987 | - | 1239 | WP_053883103.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| CPH39_RS03435 (718051) | 718051..718671 | - | 621 | WP_001125331.1 | TIGR04211 family SH3 domain-containing protein | - |
| CPH39_RS03440 (718913) | 718913..720214 | + | 1302 | WP_053883104.1 | inorganic triphosphatase | - |
| CPH39_RS03445 (720237) | 720237..723077 | + | 2841 | WP_053883105.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| CPH39_RS03450 (723125) | 723125..724558 | + | 1434 | WP_096220595.1 | bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE | - |
| CPH39_RS03455 (724678) | 724678..724737 | - | 60 | WP_010723221.1 | type I toxin-antitoxin system toxin IbsE | - |
| - (724638) | 724638..724779 | + | 142 | NuclAT_5 | - | - |
| - (724638) | 724638..724779 | + | 142 | NuclAT_5 | - | - |
| - (724638) | 724638..724779 | + | 142 | NuclAT_5 | - | - |
| - (724638) | 724638..724779 | + | 142 | NuclAT_5 | - | - |
| - (724638) | 724638..724779 | + | 142 | NuclAT_6 | - | - |
| - (724638) | 724638..724779 | + | 142 | NuclAT_6 | - | - |
| - (724638) | 724638..724779 | + | 142 | NuclAT_6 | - | - |
| - (724638) | 724638..724779 | + | 142 | NuclAT_6 | - | - |
| CPH39_RS03460 (725054) | 725054..725113 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (725014) | 725014..725155 | + | 142 | NuclAT_4 | - | - |
| - (725014) | 725014..725155 | + | 142 | NuclAT_4 | - | - |
| - (725014) | 725014..725155 | + | 142 | NuclAT_4 | - | - |
| - (725014) | 725014..725155 | + | 142 | NuclAT_4 | - | - |
| - (725014) | 725014..725155 | + | 142 | NuclAT_7 | - | - |
| - (725014) | 725014..725155 | + | 142 | NuclAT_7 | - | - |
| - (725014) | 725014..725155 | + | 142 | NuclAT_7 | - | - |
| - (725014) | 725014..725155 | + | 142 | NuclAT_7 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|