MGE detailed information
MGE type: Prophage MGE length: 56745 bp
Accession: NZ_CP043542 Location: 3022154..3078898 Organism: Escherichia coli strain F2_81 Replicon: chromosome
Accession: NZ_CP043542 Location: 3022154..3078898 Organism: Escherichia coli strain F2_81 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPH39_RS14670 (3018570) | 3018570..3019688 | - | 1119 | WP_001295940.1 | hydrogenase 1 small subunit | - |
| CPH39_RS14680 (3020305) | 3020305..3020688 | + | 384 | WP_001443410.1 | hypothetical protein | - |
| CPH39_RS14685 (3021134) | 3021134..3022027 | + | 894 | WP_052915843.1 | Tir-cytoskeleton coupling protein TccP2 | - |
| CPH39_RS14690 (3022154) | 3022154..3022423 | - | 270 | WP_001023987.1 | phage tail fiber C-terminal domain-containing protein | - |
| CPH39_RS14695 (3022425) | 3022425..3023738 | - | 1314 | WP_220541881.1 | ISNCY family transposase KIS | Transposase |
| CPH39_RS14700 (3023803) | 3023803..3024402 | - | 600 | WP_001230409.1 | hypothetical protein | VF |
| CPH39_RS14705 (3024469) | 3024469..3027945 | - | 3477 | WP_220541882.1 | host specificity protein J | - |
| CPH39_RS14710 (3028079) | 3028079..3028606 | + | 528 | WP_000649829.1 | hypothetical protein | VF |
| CPH39_RS14715 (3028797) | 3028797..3029378 | - | 582 | WP_259394521.1 | tail assembly protein | - |
| CPH39_RS14720 (3029375) | 3029375..3030118 | - | 744 | WP_220541883.1 | C40 family peptidase | - |
| CPH39_RS14725 (3030124) | 3030124..3030822 | - | 699 | WP_001152217.1 | phage minor tail protein L | - |
| CPH39_RS14730 (3030822) | 3030822..3031151 | - | 330 | WP_000847304.1 | phage tail protein | - |
| CPH39_RS14735 (3031148) | 3031148..3033727 | - | 2580 | WP_096248336.1 | phage tail tape measure protein | - |
| CPH39_RS14740 (3033708) | 3033708..3034121 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| CPH39_RS14745 (3034148) | 3034148..3034579 | - | 432 | WP_000479116.1 | phage minor tail protein G | - |
| CPH39_RS14750 (3034593) | 3034593..3035345 | - | 753 | WP_024227918.1 | phage tail protein | - |
| CPH39_RS14755 (3035353) | 3035353..3035748 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| CPH39_RS14760 (3035745) | 3035745..3036278 | - | 534 | WP_000974983.1 | phage tail protein | - |
| CPH39_RS14765 (3036294) | 3036294..3036647 | - | 354 | WP_001204554.1 | head-tail joining protein | - |
| CPH39_RS14770 (3036640) | 3036640..3037023 | - | 384 | WP_000201512.1 | DNA-packaging protein FI | - |
| CPH39_RS14775 (3037075) | 3037075..3038103 | - | 1029 | WP_000522623.1 | major capsid protein | - |
| CPH39_RS14780 (3038161) | 3038161..3038508 | - | 348 | WP_000256723.1 | head decoration protein | - |
| CPH39_RS14785 (3038545) | 3038545..3040050 | - | 1506 | WP_044722597.1 | S49 family peptidase | - |
| CPH39_RS14790 (3040040) | 3040040..3041632 | - | 1593 | WP_096220712.1 | phage portal protein | - |
| CPH39_RS14795 (3041629) | 3041629..3041835 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| CPH39_RS14800 (3041819) | 3041819..3043747 | - | 1929 | WP_012816750.1 | phage terminase large subunit family protein | - |
| CPH39_RS14805 (3043719) | 3043719..3044228 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| CPH39_RS14810 (3044631) | 3044631..3044855 | + | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| CPH39_RS14815 (3044937) | 3044937..3045251 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| CPH39_RS14820 (3045779) | 3045779..3045964 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| CPH39_RS14825 (3046186) | 3046186..3046299 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| CPH39_RS14830 (3046520) | 3046520..3047053 | - | 534 | WP_001003111.1 | lysozyme | - |
| CPH39_RS14835 (3047213) | 3047213..3047485 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| CPH39_RS14840 (3047741) | 3047741..3047956 | - | 216 | WP_024182511.1 | class II holin family protein | - |
| CPH39_RS14850 (3049708) | 3049708..3051558 | - | 1851 | WP_000874348.1 | SASA family carbohydrate esterase | - |
| CPH39_RS26580 (3051827) | 3051827..3051943 | + | 117 | Protein_2926 | hypothetical protein | - |
| CPH39_RS14870 (3052326) | 3052326..3053039 | - | 714 | WP_000261909.1 | helix-turn-helix domain-containing protein | - |
| CPH39_RS14875 (3053177) | 3053177..3053374 | - | 198 | WP_000917737.1 | hypothetical protein | - |
| CPH39_RS14880 (3053661) | 3053661..3054479 | - | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
| CPH39_RS14885 (3054631) | 3054631..3055002 | - | 372 | WP_000090265.1 | antiterminator Q family protein | - |
| CPH39_RS14890 (3054992) | 3054992..3055363 | - | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CPH39_RS14895 (3055376) | 3055376..3056425 | - | 1050 | WP_001265133.1 | DUF968 domain-containing protein | - |
| CPH39_RS14900 (3056427) | 3056427..3056705 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| CPH39_RS14905 (3056873) | 3056873..3057028 | - | 156 | WP_000813263.1 | type I toxin-antitoxin system toxin HokD | - |
| CPH39_RS14910 (3057100) | 3057100..3058173 | + | 1074 | WP_001178384.1 | IS481 family transposase ISKpn28 | Transposase |
| CPH39_RS26585 (3058389) | 3058389..3058472 | - | 84 | Protein_2936 | ORF6N domain-containing protein | - |
| CPH39_RS14915 (3058734) | 3058734..3059507 | + | 774 | WP_000160654.1 | alpha/beta hydrolase | - |
| CPH39_RS14920 (3059859) | 3059859..3060272 | - | 414 | WP_001151233.1 | DUF977 family protein | - |
| CPH39_RS14925 (3060288) | 3060288..3061058 | - | 771 | WP_000450992.1 | DUF1627 domain-containing protein | - |
| CPH39_RS14930 (3061140) | 3061140..3061826 | - | 687 | WP_000788749.1 | ATP-binding protein | - |
| CPH39_RS14935 (3061833) | 3061833..3062948 | - | 1116 | WP_001205820.1 | hypothetical protein | - |
| CPH39_RS14940 (3063027) | 3063027..3063482 | + | 456 | WP_000273724.1 | hypothetical protein | - |
| CPH39_RS14945 (3063689) | 3063689..3064114 | - | 426 | WP_000693855.1 | toxin YdaT family protein | - |
| CPH39_RS14950 (3064098) | 3064098..3064370 | - | 273 | WP_000887453.1 | YdaS family helix-turn-helix protein | - |
| CPH39_RS14955 (3064479) | 3064479..3064880 | + | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| CPH39_RS14960 (3064908) | 3064908..3065099 | + | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| CPH39_RS14965 (3065099) | 3065099..3065386 | + | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CPH39_RS14970 (3065663) | 3065663..3065818 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CPH39_RS26590 (3065820) | 3065820..3065948 | + | 129 | WP_000344963.1 | protein YdfB | - |
| CPH39_RS14975 (3065960) | 3065960..3066349 | + | 390 | WP_000394511.1 | hypothetical protein | - |
| CPH39_RS14980 (3066536) | 3066536..3066721 | - | 186 | WP_001133046.1 | hypothetical protein | - |
| CPH39_RS14985 (3067295) | 3067295..3067483 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| CPH39_RS14990 (3067480) | 3067480..3067671 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| CPH39_RS14995 (3067765) | 3067765..3070236 | + | 2472 | WP_000034468.1 | exonuclease | - |
| CPH39_RS15000 (3070304) | 3070304..3070546 | + | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| CPH39_RS15005 (3070524) | 3070524..3071543 | + | 1020 | WP_001299351.1 | hypothetical protein ; Integrase | Integrase |
| CPH39_RS15010 (3071951) | 3071951..3072610 | + | 660 | WP_053883573.1 | FtsH protease modulator YccA | - |
| CPH39_RS15015 (3072701) | 3072701..3073030 | + | 330 | WP_032223566.1 | sulfurtransferase TusE | - |
| CPH39_RS15020 (3073027) | 3073027..3073305 | - | 279 | WP_000048252.1 | acylphosphatase | - |
| CPH39_RS15025 (3073400) | 3073400..3074590 | + | 1191 | WP_000116293.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| CPH39_RS15030 (3074648) | 3074648..3074965 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| CPH39_RS15035 (3075010) | 3075010..3075423 | - | 414 | WP_000665217.1 | CoA-binding protein | - |
| CPH39_RS15040 (3075596) | 3075596..3076258 | + | 663 | WP_000847791.1 | DUF2057 family protein | - |
| CPH39_RS15045 (3076354) | 3076354..3076812 | + | 459 | WP_000424181.1 | methylglyoxal synthase | - |
| CPH39_RS15050 (3076844) | 3076844..3078898 | - | 2055 | WP_089553361.1 | DNA helicase IV | - |
| CPH39_RS15055 (3079021) | 3079021..3079467 | + | 447 | WP_001261235.1 | YccF domain-containing protein | - |
| CPH39_RS15060 (3079477) | 3079477..3081639 | + | 2163 | WP_000875041.1 | YccS family putative transporter | - |
| CPH39_RS15065 (3081602) | 3081602..3082231 | - | 630 | WP_000839153.1 | CRP-S regulon transcriptional coactivator Sxy | - |
| CPH39_RS15070 (3082450) | 3082450..3082959 | + | 510 | WP_000288710.1 | SOS-induced cell division inhibitor SulA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|