MGE detailed information
MGE type: Conjugative plasmid MGE length: 44381 bp
Accession: NZ_CP043477 Location: 1..44381 Organism: Xanthomonas hyacinthi strain CFBP 1156 Replicon: plasmid unnamed
Accession: NZ_CP043477 Location: 1..44381 Organism: Xanthomonas hyacinthi strain CFBP 1156 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZ025_RS21550 () | 37..2235 | + | 2199 | WP_104558935.1 | Protein TraI | Relaxase |
| FZ025_RS21555 () | 2232..4145 | + | 1914 | WP_046977535.1 | Conjugal transfer protein TraG | VF |
| FZ025_RS21560 () | 4142..4678 | + | 537 | WP_011171726.1 | conjugative transfer signal peptidase TraF | - |
| FZ025_RS21565 () | 4687..6879 | + | 2193 | WP_046977534.1 | DNA topoisomerase 3 | - |
| FZ025_RS21570 () | 6884..7261 | + | 378 | WP_011171724.1 | hypothetical protein | - |
| FZ025_RS21575 () | 7265..11434 | + | 4170 | WP_046977533.1 | DUF1738 domain-containing protein | - |
| FZ025_RS21580 () | 11770..12453 | + | 684 | WP_046977544.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FZ025_RS21585 () | 12564..12767 | + | 204 | WP_046977532.1 | ribbon-helix-helix domain-containing protein | - |
| FZ025_RS21590 () | 12767..13927 | + | 1161 | WP_046977543.1 | DNA cytosine methyltransferase | - |
| FZ025_RS21595 () | 13924..14784 | + | 861 | WP_104558934.1 | hypothetical protein | - |
| FZ025_RS21600 () | 14789..15157 | + | 369 | WP_146093616.1 | hypothetical protein | - |
| FZ025_RS22120 () | 15261..15365 | - | 105 | WP_208803846.1 | antitoxin VbhA family protein | - |
| FZ025_RS21610 () | 15368..15670 | + | 303 | WP_197894044.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FZ025_RS21615 () | 15627..16034 | - | 408 | WP_031944013.1 | hypothetical protein | - |
| FZ025_RS21620 () | 16031..16516 | - | 486 | WP_015063510.1 | thermonuclease family protein | - |
| FZ025_RS21625 () | 16518..16943 | - | 426 | WP_053057113.1 | Type IV secretion system putative outer membrane lipoprotein/BS1330_II0058 | VF |
| FZ025_RS21630 () | 16957..17757 | - | 801 | WP_104558933.1 | conjugal transfer protein TraX | - |
| FZ025_RS21635 () | 17658..17921 | - | 264 | WP_046977531.1 | hypothetical protein | - |
| FZ025_RS21640 () | 17947..18552 | - | 606 | WP_046977530.1 | hypothetical protein | VF |
| FZ025_RS21645 () | 18566..19159 | - | 594 | WP_015063527.1 | TrbM Mating pair formation protein | - |
| FZ025_RS21650 () | 19179..20924 | - | 1746 | WP_053057112.1 | P-type conjugative transfer protein TrbL | - |
| FZ025_RS21655 () | 20935..21174 | - | 240 | WP_031944010.1 | entry exclusion lipoprotein TrbK | - |
| FZ025_RS21660 () | 21185..21958 | - | 774 | WP_104558932.1 | P-type conjugative transfer protein TrbJ | - |
| FZ025_RS21665 () | 21977..23371 | - | 1395 | WP_046977528.1 | Type IV secretion system protein PtlG | VF |
| FZ025_RS21670 () | 23377..23844 | - | 468 | WP_046977527.1 | conjugal transfer protein TrbH | - |
| FZ025_RS21675 () | 23847..24752 | - | 906 | WP_046977526.1 | P-type conjugative transfer protein TrbG | - |
| FZ025_RS21680 () | 24765..25541 | - | 777 | WP_015063521.1 | conjugal transfer protein TrbF | - |
| FZ025_RS21685 () | 25538..28075 | - | 2538 | WP_046977525.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| FZ025_RS21690 () | 28072..28383 | - | 312 | WP_011171720.1 | conjugal transfer protein TrbD | - |
| FZ025_RS21695 () | 28386..28814 | - | 429 | WP_011171719.1 | IncP-type conjugal transfer pilin TrbC | - |
| FZ025_RS21700 () | 28826..29788 | - | 963 | WP_011171718.1 | Type IV secretion system protein PtlH | VF |
| FZ025_RS21705 () | 30043..30420 | - | 378 | WP_031944007.1 | transcriptional regulator | - |
| FZ025_RS21710 () | 30741..31610 | + | 870 | WP_031944006.1 | replication initiator protein A | - |
| FZ025_RS21715 () | 32856..33153 | + | 298 | Protein_34 | hypothetical protein | - |
| FZ025_RS21720 () | 33238..33672 | + | 435 | WP_011171688.1 | antirestriction protein | - |
| FZ025_RS21725 () | 33984..35126 | + | 1143 | WP_104558939.1 | klcB | - |
| FZ025_RS21730 () | 35141..35398 | + | 258 | WP_011171686.1 | transcriptional repressor protein KorC | - |
| FZ025_RS21735 () | 35589..35846 | + | 258 | WP_104558931.1 | stable inheritance protein KleA | - |
| FZ025_RS21740 () | 35963..36286 | + | 324 | WP_075122821.1 | protein kleE | - |
| FZ025_RS21745 () | 36288..36545 | + | 258 | WP_031944036.1 | hypothetical protein | - |
| FZ025_RS21750 () | 36708..37016 | + | 309 | WP_031944035.1 | transcriptional regulator KorA | - |
| FZ025_RS21755 () | 37013..37786 | + | 774 | WP_104558930.1 | Chromosome partitioning protein ParA | VF |
| FZ025_RS21760 () | 37783..38856 | + | 1074 | WP_031944033.1 | ParB/RepB/Spo0J family partition protein | - |
| FZ025_RS21765 () | 39052..40068 | + | 1017 | WP_104558929.1 | DNA-binding protein | - |
| FZ025_RS21770 () | 40133..40321 | + | 189 | WP_011171677.1 | antitoxin VbhA family protein | Antitoxin Detail |
| FZ025_RS21775 () | 40318..40920 | + | 603 | WP_104558928.1 | Fic/DOC family protein | Toxin Detail |
| FZ025_RS21780 () | 40944..41288 | + | 345 | WP_104558927.1 | conjugal transfer protein TraO | - |
| FZ025_RS21785 () | 41340..41969 | + | 630 | WP_104558938.1 | hypothetical protein | - |
| FZ025_RS21790 () | 42039..42476 | - | 438 | WP_011171734.1 | conjugal transfer protein TraM | - |
| FZ025_RS21795 () | 42476..43201 | - | 726 | WP_011171733.1 | conjugal transfer protein TraL | - |
| FZ025_RS21800 () | 43201..43602 | - | 402 | WP_158185625.1 | TraK family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|