MGE detailed information
MGE type: Conjugative plasmid MGE length: 67044 bp
Accession: NZ_CP043408 Location: 1..67044 Organism: Escherichia coli strain NMBU-W13E19 Replicon: plasmid pNMBU-W13E19_02
Accession: NZ_CP043408 Location: 1..67044 Organism: Escherichia coli strain NMBU-W13E19 Replicon: plasmid pNMBU-W13E19_02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZN32_RS25470 () | 1797..2450 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| FZN32_RS25475 () | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FZN32_RS25480 () | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FZN32_RS25485 () | 3383..3798 | + | 416 | Protein_4 | IS1 family transposase IS1R | Transposase |
| FZN32_RS25490 () | 3834..4379 | - | 546 | Protein_5 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FZN32_RS25495 () | 4445..5149 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FZN32_RS25500 () | 5214..7457 | - | 2244 | Protein_7 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FZN32_RS25505 () | 7471..7803 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| FZN32_RS25510 () | 7850..8725 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| FZN32_RS25515 () | 8914..9618 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FZN32_RS25520 () | 9684..9749 | + | 66 | Protein_11 | IS1 family transposase | - |
| FZN32_RS25525 () | 11198..11432 | + | 235 | Protein_12 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FZN32_RS25530 () | 11560..11841 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| FZN32_RS25535 () | 11964..12314 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| FZN32_RS25540 () | 12317..13279 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| FZN32_RS25545 () | 13426..13719 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| FZN32_RS25550 () | 13796..14479 | + | 684 | WP_000085883.1 | DNA methylase | - |
| FZN32_RS25555 () | 14480..14701 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| FZN32_RS25560 () | 14715..15149 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| FZN32_RS25565 () | 15200..15964 | + | 765 | Protein_20 | hypothetical protein | - |
| FZN32_RS25570 () | 15849..16421 | + | 573 | WP_072129844.1 | YubH family protein | - |
| FZN32_RS25575 () | 16517..16819 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| FZN32_RS25580 () | 16866..17288 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| FZN32_RS25585 () | 17285..17476 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| FZN32_RS25590 () | 18514..18744 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| FZN32_RS25595 () | 18796..20157 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| FZN32_RS25600 () | 20204..20767 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| FZN32_RS25605 () | 21171..21364 | + | 194 | Protein_28 | hypothetical protein | - |
| FZN32_RS25610 () | 21592..22119 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| FZN32_RS25615 () | 22177..22410 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| FZN32_RS25620 () | 22471..24494 | + | 2024 | Protein_31 | ParB/RepB/Spo0J family partition protein | - |
| FZN32_RS25625 () | 24563..24997 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| FZN32_RS25630 () | 24994..25713 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| FZN32_RS25635 () | 25725..25913 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 25725..25949 | + | 225 | NuclAT_0 | - | - |
| - () | 25725..25949 | + | 225 | NuclAT_0 | - | - |
| - () | 25725..25949 | + | 225 | NuclAT_0 | - | - |
| - () | 25725..25949 | + | 225 | NuclAT_0 | - | - |
| - () | 25882..25947 | + | 66 | - | - | Antitoxin Detail |
| FZN32_RS25640 () | 25993..26151 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| FZN32_RS25645 () | 26647..26840 | + | 194 | Protein_36 | hypothetical protein | - |
| FZN32_RS25650 () | 27066..27362 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| FZN32_RS25655 () | 27473..28294 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| FZN32_RS25660 () | 28591..29193 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| FZN32_RS25665 () | 29516..29899 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| FZN32_RS25670 () | 30093..30764 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| FZN32_RS25675 () | 30901..31128 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| FZN32_RS25680 () | 31161..31520 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| FZN32_RS25685 () | 31535..31846 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| FZN32_RS25690 () | 31868..32434 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| FZN32_RS25695 () | 32421..33149 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| FZN32_RS25700 () | 33149..34600 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| FZN32_RS25705 () | 34569..35156 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| FZN32_RS25710 () | 35095..35463 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| FZN32_RS25715 () | 35460..35975 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FZN32_RS25720 () | 36110..36331 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| FZN32_RS25725 () | 36324..36800 | + | 477 | WP_000549587.1 | hypothetical protein | - |
| FZN32_RS25730 () | 36880..37098 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| FZN32_RS25735 () | 37126..37473 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| FZN32_RS25740 () | 37599..40229 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| FZN32_RS25745 () | 40226..40612 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| FZN32_RS25750 () | 40609..41241 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| FZN32_RS25755 () | 41238..42230 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| FZN32_RS25760 () | 42260..42565 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| FZN32_RS25765 () | 42574..43212 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FZN32_RS25770 () | 43209..45059 | + | 1851 | WP_173002417.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FZN32_RS25775 () | 45086..45343 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| FZN32_RS25780 () | 45336..46079 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FZN32_RS25785 () | 46093..46437 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| FZN32_RS25790 () | 46556..46840 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FZN32_RS25795 () | 46827..47372 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FZN32_RS25800 () | 47302..47649 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| FZN32_RS25805 () | 47597..48022 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| FZN32_RS25810 () | 48009..49382 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| FZN32_RS25815 () | 49379..52201 | + | 2823 | WP_173002418.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FZN32_RS25820 () | 52217..52702 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| FZN32_RS25825 () | 52751..53482 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| FZN32_RS25830 () | 53685..54422 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| FZN32_RS25835 () | 54473..56698 | + | 2226 | WP_173002419.1 | type IV conjugative transfer system coupling protein TraD | - |
| FZN32_RS25840 () | 56698..61968 | + | 5271 | WP_173002420.1 | Multifunctional conjugation protein TraI | Relaxase |
| FZN32_RS25845 () | 61988..62734 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| FZN32_RS25850 () | 62793..63653 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| FZN32_RS25855 () | 63756..64316 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| FZN32_RS25860 () | 64445..64657 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| FZN32_RS25865 () | 64839..64940 | + | 102 | Protein_80 | nuclease | - |
| FZN32_RS25870 () | 65409..65618 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| FZN32_RS25875 () | 65656..66246 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| FZN32_RS25880 () | 66486..66740 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|