MGE detailed information
MGE type: Genomic_island MGE length: 27747 bp
Accession: NZ_CP043403 Location: 2768187..2795933 Organism: Xanthomonas oryzae pv. oryzicola strain GX01 Replicon: chromosome
Accession: NZ_CP043403 Location: 2768187..2795933 Organism: Xanthomonas oryzae pv. oryzicola strain GX01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XOCgx_RS13010 () | 2764095..2765895 | - | 1801 | Protein_2349 | non-homologous end-joining DNA ligase | - |
| XOCgx_RS13015 () | 2765911..2766087 | - | 177 | WP_053501533.1 | DUF3606 domain-containing protein | - |
| XOCgx_RS13020 () | 2766309..2766710 | + | 402 | WP_149621644.1 | H-NS histone family protein | - |
| XOCgx_RS13030 () | 2767172..2767402 | - | 231 | WP_020228533.1 | DUF2188 domain-containing protein | - |
| XOCgx_RS13035 () | 2767483..2767836 | + | 354 | WP_080344380.1 | DUF488 domain-containing protein | - |
| XOCgx_RS13040 () | 2767793..2768107 | - | 315 | Protein_2354 | hypothetical protein | - |
| XOCgx_RS13045 () | 2768187..2768522 | + | 336 | WP_131075300.1 | hypothetical protein | - |
| XOCgx_RS13050 () | 2768552..2768827 | + | 276 | Protein_2356 | ATP-binding protein | - |
| XOCgx_RS13055 () | 2768843..2769310 | - | 468 | WP_024710965.1 | GNAT family N-acetyltransferase | - |
| XOCgx_RS13060 () | 2769458..2770432 | + | 975 | WP_024710966.1 | 2,3-diaminopropionate biosynthesis protein SbnA | - |
| XOCgx_RS13065 () | 2770429..2771451 | + | 1023 | WP_024710967.1 | 2,3-diaminopropionate biosynthesis protein SbnB | - |
| XOCgx_RS13070 () | 2771457..2772659 | - | 1203 | WP_024710968.1 | ATP-grasp domain-containing protein | - |
| XOCgx_RS13075 () | 2772652..2773881 | - | 1230 | WP_024710969.1 | ATP-grasp domain-containing protein | - |
| XOCgx_RS13080 () | 2773890..2775071 | - | 1182 | WP_014503040.1 | MFS transporter | - |
| XOCgx_RS13085 () | 2775107..2775604 | - | 498 | WP_050585836.1 | citrate lyase holo-[acyl-carrier protein] synthase | - |
| XOCgx_RS13090 () | 2775606..2776442 | - | 837 | WP_161600048.1 | triphosphoribosyl-dephospho-CoA synthase | - |
| XOCgx_RS13095 () | 2776478..2777617 | - | 1140 | WP_024710973.1 | hypothetical protein | - |
| XOCgx_RS13100 () | 2777611..2778846 | - | 1236 | WP_024710974.1 | ATP-grasp domain-containing protein | - |
| XOCgx_RS13105 () | 2778846..2779106 | - | 261 | WP_024710975.1 | hypothetical protein | - |
| XOCgx_RS13110 () | 2779099..2780166 | - | 1068 | WP_131078361.1 | hypothetical protein | - |
| XOCgx_RS13115 () | 2780232..2780930 | - | 699 | WP_014503034.1 | citrate lyase subunit beta | - |
| XOCgx_RS13120 () | 2781229..2782191 | - | 963 | WP_044751530.1 | IS110 family transposase ISBcen8 | Transposase |
| XOCgx_RS23180 () | 2782416..2782718 | - | 303 | WP_047339762.1 | hypothetical protein | - |
| XOCgx_RS13135 () | 2783591..2783932 | - | 342 | WP_050585837.1 | ParB N-terminal domain-containing protein | - |
| XOCgx_RS13140 () | 2783929..2785495 | - | 1567 | Protein_2373 | tRNA-specific 2-thiouridylase MnmA ; Integrase | Integrase |
| XOCgx_RS13145 () | 2785632..2786102 | - | 471 | WP_149621647.1 | hypothetical protein | - |
| XOCgx_RS13150 () | 2786189..2787040 | - | 852 | WP_047339759.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| XOCgx_RS13155 () | 2787037..2787642 | - | 606 | WP_024710981.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| XOCgx_RS13160 () | 2787886..2788233 | - | 348 | WP_149621648.1 | ISNCY family transposase ISLad2 | Transposase |
| XOCgx_RS13165 () | 2788184..2788696 | - | 513 | WP_161600049.1 | ISNCY family transposase ISLad2 | Transposase |
| XOCgx_RS23450 () | 2788997..2789173 | + | 177 | WP_014503024.1 | hypothetical protein | - |
| XOCgx_RS13170 () | 2789485..2790570 | + | 1086 | WP_048485514.1 | sensor domain-containing diguanylate cyclase | - |
| XOCgx_RS13175 () | 2790613..2791122 | - | 510 | WP_014503022.1 | Superoxide dismutase-like protein YojM | VF |
| XOCgx_RS13180 () | 2791134..2792792 | - | 1659 | WP_024710984.1 | Tail-specific protease | VF |
| XOCgx_RS13185 () | 2793097..2793687 | + | 591 | Protein_2383 | DNA-3-methyladenine glycosylase | - |
| XOCgx_RS13190 () | 2793678..2795657 | - | 1980 | Protein_2384 | ATP-dependent DNA helicase | - |
| XOCgx_RS13200 () | 2795909..2796253 | + | 345 | WP_047340475.1 | DUF3301 domain-containing protein | - |
| XOCgx_RS13205 () | 2796463..2796792 | - | 330 | WP_053520505.1 | hypothetical protein | - |
| XOCgx_RS13210 () | 2796825..2797265 | - | 441 | WP_014503014.1 | ClpXP protease specificity-enhancing factor | - |
| XOCgx_RS13215 () | 2797344..2797979 | - | 636 | WP_014503013.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| XOCgx_RS13220 () | 2798374..2799132 | - | 759 | WP_014503012.1 | cytochrome c1 | - |
| XOCgx_RS13225 () | 2799125..2800384 | - | 1260 | WP_014503011.1 | cytochrome bc complex cytochrome b subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|