MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP043295 Location: 5098271..5098729 Organism: Escherichia coli strain WCHEC040047 Replicon: chromosome
Accession: NZ_CP043295 Location: 5098271..5098729 Organism: Escherichia coli strain WCHEC040047 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK54_RS24520 (5093287) | 5093287..5093526 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FYK54_RS24525 (5093526) | 5093526..5093813 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FYK54_RS24530 (5093885) | 5093885..5094040 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FYK54_RS24535 (5094257) | 5094257..5094508 | + | 252 | WP_000980994.1 | protein Rem | - |
| FYK54_RS24540 (5094575) | 5094575..5094853 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| FYK54_RS24545 (5094855) | 5094855..5095904 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| FYK54_RS24550 (5095918) | 5095918..5096670 | + | 753 | WP_001047135.1 | antitermination protein | - |
| FYK54_RS24555 (5096948) | 5096948..5097037 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| FYK54_RS24560 (5097092) | 5097092..5097304 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FYK54_RS24565 (5097605) | 5097605..5097820 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FYK54_RS24570 (5098271) | 5098271..5098729 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| FYK54_RS24575 (5098896) | 5098896..5099066 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| FYK54_RS24580 (5099286) | 5099286..5099501 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FYK54_RS24585 (5099506) | 5099506..5099817 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| FYK54_RS24590 (5099814) | 5099814..5100347 | + | 534 | WP_001092971.1 | lysozyme | - |
| FYK54_RS24595 (5100344) | 5100344..5100841 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FYK54_RS24600 (5101204) | 5101204..5101416 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FYK54_RS24605 (5101427) | 5101427..5101615 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| FYK54_RS24610 (5101618) | 5101618..5101683 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| FYK54_RS24615 (5101688) | 5101688..5101918 | + | 231 | WP_000720962.1 | protein YnfN | - |
| FYK54_RS24620 (5102090) | 5102090..5102263 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FYK54_RS24625 (5102415) | 5102415..5102825 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FYK54_RS24630 (5102883) | 5102883..5103116 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|