MGE detailed information
MGE type: Prophage MGE length: 33998 bp
Accession: NZ_CP043295 Location: 5072156..5106153 Organism: Escherichia coli strain WCHEC040047 Replicon: chromosome
Accession: NZ_CP043295 Location: 5072156..5106153 Organism: Escherichia coli strain WCHEC040047 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK54_RS24370 (5068405) | 5068405..5070831 | - | 2427 | WP_001551145.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| FYK54_RS24375 (5071030) | 5071030..5071335 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| FYK54_RS24380 (5071443) | 5071443..5072153 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| FYK54_RS24385 (5072156) | 5072156..5072716 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| FYK54_RS24390 (5072751) | 5072751..5073092 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| FYK54_RS24395 (5073227) | 5073227..5073553 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| FYK54_RS24400 (5073759) | 5073759..5074973 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FYK54_RS24405 (5074985) | 5074985..5076004 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| FYK54_RS24410 (5076192) | 5076192..5077472 | - | 1281 | WP_021523105.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| FYK54_RS24415 (5077528) | 5077528..5079099 | - | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| FYK54_RS24420 (5079119) | 5079119..5079466 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FYK54_RS24425 (5079466) | 5079466..5080143 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FYK54_RS24430 (5080214) | 5080214..5080465 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| FYK54_RS24435 (5080538) | 5080538..5083009 | - | 2472 | WP_000048363.1 | exonuclease | - |
| FYK54_RS24440 (5083103) | 5083103..5083294 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| FYK54_RS24445 (5083291) | 5083291..5083479 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FYK54_RS25600 (5084440) | 5084440..5084541 | - | 102 | Protein_4779 | protein YdfB | - |
| FYK54_RS24455 (5084543) | 5084543..5084698 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| FYK54_RS24460 (5084867) | 5084867..5085274 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| FYK54_RS24465 (5085355) | 5085355..5085582 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| FYK54_RS24470 (5085566) | 5085566..5086087 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| FYK54_RS24475 (5086068) | 5086068..5087033 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| FYK54_RS24480 (5087074) | 5087074..5087472 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| FYK54_RS24485 (5087675) | 5087675..5088340 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| FYK54_RS24490 (5088549) | 5088549..5089163 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| FYK54_RS24495 (5089166) | 5089166..5090188 | + | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| FYK54_RS24500 (5090693) | 5090693..5091715 | + | 1023 | Protein_4789 | ISNCY family transposase ISCARN112 | Transposase |
| FYK54_RS24505 (5091836) | 5091836..5091985 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| FYK54_RS24510 (5092422) | 5092422..5092754 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| FYK54_RS24515 (5092957) | 5092957..5093262 | - | 306 | WP_001326990.1 | protein YdfV | - |
| FYK54_RS24520 (5093287) | 5093287..5093526 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FYK54_RS24525 (5093526) | 5093526..5093813 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FYK54_RS24530 (5093885) | 5093885..5094040 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FYK54_RS24535 (5094257) | 5094257..5094508 | + | 252 | WP_000980994.1 | protein Rem | - |
| FYK54_RS24540 (5094575) | 5094575..5094853 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| FYK54_RS24545 (5094855) | 5094855..5095904 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| FYK54_RS24550 (5095918) | 5095918..5096670 | + | 753 | WP_001047135.1 | antitermination protein | - |
| FYK54_RS24555 (5096948) | 5096948..5097037 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| FYK54_RS24560 (5097092) | 5097092..5097304 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FYK54_RS24565 (5097605) | 5097605..5097820 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FYK54_RS24570 (5098271) | 5098271..5098729 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| FYK54_RS24575 (5098896) | 5098896..5099066 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| FYK54_RS24580 (5099286) | 5099286..5099501 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FYK54_RS24585 (5099506) | 5099506..5099817 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| FYK54_RS24590 (5099814) | 5099814..5100347 | + | 534 | WP_001092971.1 | lysozyme | - |
| FYK54_RS24595 (5100344) | 5100344..5100841 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FYK54_RS24600 (5101204) | 5101204..5101416 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FYK54_RS24605 (5101427) | 5101427..5101615 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| FYK54_RS24610 (5101618) | 5101618..5101683 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| FYK54_RS24615 (5101688) | 5101688..5101918 | + | 231 | WP_000720962.1 | protein YnfN | - |
| FYK54_RS24620 (5102090) | 5102090..5102263 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FYK54_RS24625 (5102415) | 5102415..5102825 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FYK54_RS24630 (5102883) | 5102883..5103116 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FYK54_RS24635 (5103505) | 5103505..5104050 | + | 546 | WP_000453600.1 | DNA-packaging protein | - |
| FYK54_RS24640 (5104025) | 5104025..5105950 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| FYK54_RS24645 (5105947) | 5105947..5106153 | + | 207 | WP_000198149.1 | gpW family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|