MGE detailed information
MGE type: Prophage MGE length: 69641 bp
Accession: NZ_CP043274 Location: 1948551..2018191 Organism: Escherichia coli strain WCHEC035148 Replicon: chromosome
Accession: NZ_CP043274 Location: 1948551..2018191 Organism: Escherichia coli strain WCHEC035148 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK53_RS09330 () | 1943757..1946186 | + | 2430 | WP_000176795.1 | trimethylamine N-oxide reductase TorZ | - |
| FYK53_RS09335 () | 1946351..1947322 | - | 972 | WP_000564750.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| FYK53_RS09340 () | 1947319..1948062 | - | 744 | WP_000019585.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| FYK53_RS09345 () | 1948103..1948498 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| FYK53_RS09350 () | 1948551..1949330 | - | 780 | WP_046659708.1 | DUF72 domain-containing protein | - |
| FYK53_RS09355 () | 1949327..1950586 | - | 1260 | WP_046659706.1 | Putative defective protein IntQ ; Integrase | Integrase |
| FYK53_RS09360 () | 1950629..1950874 | - | 246 | WP_016244760.1 | excisionase family protein | - |
| FYK53_RS09365 () | 1951034..1951252 | - | 219 | WP_046659703.1 | TraR/DksA C4-type zinc finger protein | - |
| FYK53_RS09370 () | 1951249..1951449 | - | 201 | WP_046659701.1 | hypothetical protein | - |
| FYK53_RS09375 () | 1951604..1951807 | + | 204 | WP_086625037.1 | DUF4752 family protein | - |
| FYK53_RS09380 () | 1951914..1952297 | + | 384 | WP_086625036.1 | hypothetical protein | - |
| FYK53_RS09385 () | 1952297..1952491 | + | 195 | WP_046659679.1 | hypothetical protein | - |
| FYK53_RS09390 () | 1952690..1952887 | + | 198 | WP_025269967.1 | hypothetical protein | - |
| FYK53_RS09395 () | 1952924..1953106 | + | 183 | WP_025269966.1 | hypothetical protein | - |
| FYK53_RS09400 () | 1953103..1953366 | + | 264 | WP_025269997.1 | DNA polymerase III subunit theta | - |
| FYK53_RS09405 () | 1953473..1954069 | + | 597 | WP_046659672.1 | DUF1367 family protein | - |
| FYK53_RS09410 () | 1954069..1954275 | + | 207 | WP_032148606.1 | hypothetical protein | - |
| FYK53_RS09415 () | 1954278..1954568 | + | 291 | WP_024194779.1 | DUF1364 domain-containing protein | - |
| FYK53_RS09420 () | 1954565..1954927 | + | 363 | WP_029363688.1 | crossover junction endodeoxyribonuclease RusA | - |
| FYK53_RS09425 () | 1954924..1955064 | + | 141 | WP_001548467.1 | YlcG family protein | - |
| FYK53_RS09430 () | 1955061..1955750 | + | 690 | WP_046659669.1 | bacteriophage antitermination protein Q | - |
| FYK53_RS09440 () | 1956206..1956505 | + | 300 | WP_122633140.1 | phage holin family protein | - |
| FYK53_RS09445 () | 1956502..1957041 | + | 540 | WP_046659668.1 | putative peptidoglycan-binding domain-containing protein | - |
| FYK53_RS09450 () | 1957038..1957385 | + | 348 | WP_032412824.1 | hypothetical protein | - |
| FYK53_RS09455 () | 1957382..1957657 | + | 276 | WP_046659666.1 | hypothetical protein | - |
| FYK53_RS09460 () | 1957608..1957805 | + | 198 | WP_046659665.1 | hypothetical protein | - |
| FYK53_RS09465 () | 1957903..1958211 | + | 309 | WP_024623185.1 | hypothetical protein | - |
| FYK53_RS09470 () | 1958208..1958474 | + | 267 | WP_046659662.1 | hypothetical protein | - |
| FYK53_RS09475 () | 1958644..1959072 | + | 429 | WP_046659660.1 | hypothetical protein | - |
| FYK53_RS09480 () | 1959419..1959907 | + | 489 | WP_004218030.1 | hypothetical protein | - |
| FYK53_RS09485 () | 1959858..1961258 | + | 1401 | WP_046659658.1 | PBSX family phage terminase large subunit | - |
| FYK53_RS09490 () | 1961481..1962932 | + | 1452 | WP_001085714.1 | DUF1073 domain-containing protein | - |
| FYK53_RS09495 () | 1962988..1963536 | + | 549 | WP_000233062.1 | phage minor head protein | - |
| FYK53_RS09500 () | 1963568..1963990 | + | 423 | WP_046659655.1 | hypothetical protein | - |
| FYK53_RS09505 () | 1964046..1965248 | + | 1203 | WP_046659652.1 | DUF2213 domain-containing protein | - |
| FYK53_RS09510 () | 1965252..1965746 | + | 495 | WP_000528476.1 | hypothetical protein | - |
| FYK53_RS09515 () | 1965758..1966699 | + | 942 | WP_020804064.1 | DUF2184 domain-containing protein | - |
| FYK53_RS09520 () | 1966739..1967020 | + | 282 | WP_000725700.1 | IS66 family transposase ISStau5 | Transposase |
| FYK53_RS09525 () | 1966989..1967408 | + | 420 | WP_046659650.1 | DUF4054 domain-containing protein | - |
| FYK53_RS09530 () | 1967405..1967911 | + | 507 | WP_025269952.1 | hypothetical protein | - |
| FYK53_RS09535 () | 1967911..1968297 | + | 387 | WP_023312779.1 | hypothetical protein | - |
| FYK53_RS09540 () | 1968392..1968832 | + | 441 | WP_004152176.1 | hypothetical protein | - |
| FYK53_RS09545 () | 1968836..1968991 | + | 156 | Protein_1868 | hypothetical protein | - |
| FYK53_RS09550 () | 1968968..1969726 | + | 759 | WP_086625038.1 | DUF2612 domain-containing protein | - |
| FYK53_RS09555 () | 1969726..1970607 | + | 882 | WP_025270001.1 | hypothetical protein | - |
| FYK53_RS09560 () | 1970607..1970777 | + | 171 | WP_164686900.1 | hypothetical protein | - |
| FYK53_RS09565 () | 1970859..1972943 | + | 2085 | WP_126875314.1 | hypothetical protein | - |
| FYK53_RS09570 () | 1972952..1973131 | + | 180 | WP_025270003.1 | hypothetical protein | - |
| FYK53_RS09575 () | 1973245..1973562 | + | 318 | WP_025270004.1 | hypothetical protein | - |
| FYK53_RS09580 () | 1973735..1973830 | - | 96 | Protein_1875 | hypothetical protein | - |
| FYK53_RS09585 () | 1973827..1974393 | - | 567 | WP_000891620.1 | hydrolase | - |
| FYK53_RS09590 () | 1974703..1976475 | + | 1773 | WP_001258677.1 | aspartate--tRNA ligase | - |
| FYK53_RS09595 () | 1976593..1977045 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| FYK53_RS09600 () | 1977074..1977814 | + | 741 | WP_000907248.1 | putative transcriptional regulatory protein YebC | VF |
| FYK53_RS09605 () | 1977849..1978370 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| FYK53_RS09610 () | 1978372..1978974 | - | 603 | WP_046659996.1 | YebB family permuted papain-like enzyme | - |
| FYK53_RS09615 () | 1979045..1979110 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| FYK53_RS09620 () | 1979249..1979860 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| FYK53_RS09625 () | 1979869..1980879 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| FYK53_RS09630 () | 1981220..1982005 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| FYK53_RS09635 () | 1982002..1982757 | - | 756 | WP_000202990.1 | Zinc import ATP-binding protein ZnuC | VF |
| FYK53_RS09640 () | 1982836..1983768 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| FYK53_RS09645 () | 1983784..1985106 | + | 1323 | WP_046659999.1 | murein DD-endopeptidase MepM | - |
| FYK53_RS09650 () | 1985226..1986197 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| FYK53_RS09655 () | 1986328..1987770 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| FYK53_RS09660 () | 1987898..1988767 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| FYK53_RS09665 () | 1989105..1990580 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| FYK53_RS09670 () | 1990815..1992626 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| FYK53_RS09675 () | 1992663..1993304 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| FYK53_RS09680 () | 1993360..1994538 | - | 1179 | WP_000173475.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| FYK53_RS09685 () | 1994672..1994962 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| FYK53_RS09690 () | 1995029..1995385 | + | 357 | WP_001295500.1 | protein YebF | - |
| FYK53_RS09695 () | 1995712..1996371 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| FYK53_RS09700 () | 1996580..1998640 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| FYK53_RS09705 () | 1998637..1999299 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| FYK53_RS09710 () | 1999323..1999979 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| FYK53_RS09715 () | 2000081..2000311 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| FYK53_RS09720 () | 2000450..2000824 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| FYK53_RS09725 () | 2000828..2001700 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| FYK53_RS09730 () | 2001713..2002054 | + | 342 | WP_000976492.1 | YebY family protein | - |
| - | 2002082..2002353 | - | 272 | - | - | Antitoxin Detail |
| - | 2002212..2002315 | + | 104 | - | - | Toxin Detail |
| FYK53_RS09735 () | 2002450..2003106 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| FYK53_RS09740 () | 2003107..2003298 | - | 192 | WP_001296140.1 | YebW family protein | - |
| FYK53_RS09745 () | 2003403..2003639 | - | 237 | WP_001295499.1 | YebV family protein | - |
| FYK53_RS09750 () | 2003757..2005196 | - | 1440 | WP_000057023.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| FYK53_RS09755 () | 2005276..2007909 | - | 2634 | WP_001356288.1 | hypothetical protein | VF |
| FYK53_RS09760 () | 2007878..2009161 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| FYK53_RS09765 () | 2009291..2009788 | + | 498 | WP_001373833.1 | L-methionine (R)-S-oxide reductase | - |
| FYK53_RS09770 () | 2009885..2010583 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| FYK53_RS09775 () | 2010603..2012651 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| FYK53_RS09780 () | 2012843..2013724 | + | 882 | WP_000984517.1 | protease HtpX | - |
| FYK53_RS09785 () | 2013770..2015143 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| FYK53_RS09790 () | 2015320..2016111 | + | 792 | WP_001262192.1 | DNA-binding transcriptional regulator KdgR | - |
| FYK53_RS09795 () | 2016254..2016493 | - | 240 | WP_001211011.1 | YobH family protein | - |
| FYK53_RS09800 () | 2016652..2016795 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| FYK53_RS09805 () | 2016870..2017157 | + | 288 | WP_001006866.1 | YebO family protein | - |
| FYK53_RS09810 () | 2017826..2017969 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| FYK53_RS09815 () | 2017982..2018191 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| FYK53_RS09820 () | 2018357..2019166 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| FYK53_RS09825 () | 2019163..2019729 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| FYK53_RS09830 () | 2020158..2020616 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| FYK53_RS09835 () | 2020671..2021522 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| FYK53_RS09840 () | 2021535..2022335 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|