MGE detailed information
MGE type: Conjugative plasmid MGE length: 132007 bp
Accession: NZ_CP043270 Location: 1..132007 Organism: Escherichia albertii strain RM9974 Replicon: plasmid p1RM9974
Accession: NZ_CP043270 Location: 1..132007 Organism: Escherichia albertii strain RM9974 Replicon: plasmid p1RM9974
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK18_RS25670 (FYK18_26145) | 259..990 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| FYK18_RS25675 (FYK18_26150) | 1004..1513 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| FYK18_RS25680 (FYK18_26155) | 1510..4335 | - | 2826 | WP_265451237.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| FYK18_RS25685 (FYK18_26160) | 4332..5705 | - | 1374 | WP_021532658.1 | conjugal transfer pilus assembly protein TraH | - |
| FYK18_RS25690 (FYK18_26165) | 5705..6067 | - | 363 | WP_265451239.1 | P-type conjugative transfer protein TrbJ | - |
| FYK18_RS25695 (FYK18_26170) | 5997..6542 | - | 546 | WP_000059815.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FYK18_RS25700 (FYK18_26175) | 6529..6813 | - | 285 | WP_059249367.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FYK18_RS25705 (FYK18_26180) | 6932..7279 | - | 348 | WP_265451242.1 | conjugal transfer protein TrbA | - |
| FYK18_RS25710 (FYK18_26185) | 7295..8038 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FYK18_RS25715 (FYK18_26190) | 8031..8288 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| FYK18_RS25720 (FYK18_26195) | 8315..10123 | - | 1809 | WP_265451243.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FYK18_RS25725 (FYK18_26200) | 10120..10758 | - | 639 | WP_001104086.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FYK18_RS25730 (FYK18_26205) | 10786..11238 | - | 453 | WP_027663276.1 | hypothetical protein | - |
| FYK18_RS25735 (FYK18_26210) | 11231..11545 | - | 315 | WP_265451245.1 | hypothetical protein | - |
| FYK18_RS25740 (FYK18_26215) | 11556..12020 | - | 465 | WP_042110600.1 | hypothetical protein | - |
| FYK18_RS25745 (FYK18_26220) | 12046..13038 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| FYK18_RS25750 (FYK18_26225) | 13035..13667 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FYK18_RS25755 (FYK18_26230) | 13664..14050 | - | 387 | WP_021514856.1 | type-F conjugative transfer system protein TrbI | - |
| FYK18_RS25760 (FYK18_26235) | 14047..16677 | - | 2631 | WP_265451246.1 | type IV secretion system protein TraC | - |
| FYK18_RS25765 (FYK18_26240) | 16803..17165 | - | 363 | WP_039520300.1 | hypothetical protein | - |
| FYK18_RS25770 (FYK18_26245) | 17193..17408 | - | 216 | WP_000556749.1 | hypothetical protein | - |
| FYK18_RS25775 (FYK18_26250) | 17488..17961 | - | 474 | WP_000549595.1 | hypothetical protein | - |
| FYK18_RS25780 (FYK18_26255) | 17954..18358 | - | 405 | WP_265451247.1 | hypothetical protein | - |
| FYK18_RS25785 (FYK18_26260) | 18351..18572 | - | 222 | WP_003676426.1 | conjugal transfer protein TraR | - |
| FYK18_RS25790 (FYK18_26265) | 18707..19222 | - | 516 | WP_089700054.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FYK18_RS25795 (FYK18_26270) | 19219..19539 | - | 321 | WP_252370749.1 | conjugal transfer protein TrbD | - |
| FYK18_RS25800 (FYK18_26275) | 19526..20116 | - | 591 | WP_265451248.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| FYK18_RS25805 (FYK18_26280) | 20106..21554 | - | 1449 | WP_265451249.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| FYK18_RS25810 (FYK18_26285) | 21554..22282 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| FYK18_RS25815 (FYK18_26290) | 22269..22835 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| FYK18_RS25820 (FYK18_26295) | 22857..23168 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FYK18_RS25825 (FYK18_26300) | 23183..23542 | - | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| FYK18_RS25830 (FYK18_26305) | 23575..23976 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| FYK18_RS25835 (FYK18_26310) | 24069..24758 | - | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| FYK18_RS25840 (FYK18_26315) | 24945..25328 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FYK18_RS25845 (FYK18_26320) | 25649..26251 | + | 603 | WP_265451250.1 | hypothetical protein | VF |
| FYK18_RS25850 (FYK18_26325) | 26547..27367 | - | 821 | Protein_37 | DUF932 domain-containing protein | - |
| FYK18_RS25855 (FYK18_26330) | 27485..27772 | - | 288 | WP_000107538.1 | hypothetical protein | - |
| FYK18_RS25860 | 28073..28234 | + | 162 | Protein_39 | hypothetical protein | - |
| FYK18_RS25865 (FYK18_26340) | 28975..30642 | + | 1668 | WP_265451252.1 | group II intron reverse transcriptase/maturase | - |
| FYK18_RS25870 (FYK18_26350) | 30955..31146 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| FYK18_RS25875 (FYK18_26355) | 31143..31565 | - | 423 | WP_000271726.1 | DUF1380 family protein | - |
| FYK18_RS25880 (FYK18_26360) | 31612..32037 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| FYK18_RS25885 (FYK18_26370) | 32455..33225 | - | 771 | WP_024133193.1 | hypothetical protein | - |
| FYK18_RS25890 (FYK18_26375) | 33276..33762 | - | 487 | Protein_45 | DUF1380 family protein | - |
| FYK18_RS25895 (FYK18_26380) | 33722..33943 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| FYK18_RS25900 (FYK18_26385) | 33944..34627 | - | 684 | WP_000086185.1 | DNA methylase | - |
| FYK18_RS25905 (FYK18_26390) | 34908..35927 | - | 1020 | Protein_48 | IS110 family transposase ISEc11 | Transposase |
| FYK18_RS25910 (FYK18_26395) | 36145..36455 | - | 311 | Protein_49 | hypothetical protein | - |
| FYK18_RS25915 (FYK18_26400) | 36452..37354 | - | 903 | WP_077871495.1 | DUF1281 domain-containing protein | - |
| FYK18_RS25920 (FYK18_26410) | 37963..38934 | - | 972 | WP_059242500.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FYK18_RS25925 (FYK18_26415) | 38934..40100 | - | 1167 | WP_059242498.1 | Sporulation initiation inhibitor protein Soj | VF |
| FYK18_RS25930 (FYK18_26420) | 40688..41443 | - | 756 | WP_265451253.1 | replication initiation protein RepE | - |
| FYK18_RS25935 (FYK18_26425) | 42164..42970 | - | 807 | WP_059242594.1 | site-specific integrase | - |
| FYK18_RS25940 (FYK18_26430) | 42971..43276 | - | 306 | WP_059242593.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FYK18_RS25945 (FYK18_26435) | 43278..43496 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FYK18_RS25950 (FYK18_26445) | 44093..44347 | + | 255 | WP_059242592.1 | hypothetical protein | - |
| FYK18_RS25955 (FYK18_26450) | 44347..44937 | + | 591 | WP_265451254.1 | hypothetical protein | - |
| FYK18_RS25960 | 44957..45087 | - | 131 | Protein_59 | DUF6404 family protein | - |
| FYK18_RS25965 (FYK18_26455) | 45075..45637 | - | 563 | Protein_60 | IS3 family transposase IS2 | Transposase |
| FYK18_RS25970 (FYK18_26460) | 45653..53425 | - | 7773 | WP_265451255.1 | Toxin B | VF |
| FYK18_RS25975 (FYK18_26465) | 53574..53823 | - | 250 | Protein_62 | IS3 family transposase IS2 | Transposase |
| FYK18_RS25980 (FYK18_26470) | 53900..54525 | - | 626 | Protein_63 | IS3 family transposase | - |
| FYK18_RS25985 (FYK18_26475) | 54616..55530 | + | 915 | Protein_64 | IS110 family transposase ISSfl8 | Transposase |
| FYK18_RS25990 (FYK18_26480) | 55528..55959 | - | 432 | Protein_65 | IS3 family transposase ISKpn38 | Transposase |
| FYK18_RS25995 (FYK18_26490) | 56072..57056 | + | 985 | Protein_66 | IS21 family transposase | - |
| FYK18_RS26000 (FYK18_26495) | 57056..57835 | + | 780 | Protein_67 | IS21 family transposase IS100 | Transposase |
| FYK18_RS26005 (FYK18_26505) | 58338..59186 | - | 849 | WP_059257263.1 | IS110 family transposase ISEc66 | Transposase |
| FYK18_RS26010 (FYK18_26515) | 59545..60117 | - | 573 | Protein_69 | DUF1281 domain-containing protein | - |
| FYK18_RS26015 (FYK18_26520) | 60113..60202 | + | 90 | Protein_70 | DUF4113 domain-containing protein | - |
| FYK18_RS26020 (FYK18_26525) | 60323..61094 | - | 772 | Protein_71 | IS4 family transposase ISEc13 | Transposase |
| FYK18_RS26025 (FYK18_26530) | 61328..62290 | - | 963 | WP_265451256.1 | ParB family protein | - |
| FYK18_RS26030 (FYK18_26535) | 62287..63492 | - | 1206 | WP_059274160.1 | Plasmid partition protein A | VF |
| FYK18_RS26035 (FYK18_26540) | 63879..64130 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| FYK18_RS26040 | 64127..64404 | + | 278 | Protein_75 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FYK18_RS26045 (FYK18_26545) | 64405..64683 | + | 279 | Protein_76 | IS3 family transposase ISKpn37 | Transposase |
| FYK18_RS26050 (FYK18_26550) | 65333..66310 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| FYK18_RS26055 (FYK18_26555) | 66593..66894 | - | 302 | Protein_78 | tyrosine-type recombinase/integrase | - |
| FYK18_RS26060 (FYK18_26560) | 66962..68493 | + | 1532 | Protein_79 | IS3 family transposase | - |
| FYK18_RS26065 (FYK18_26565) | 68553..68996 | - | 444 | Protein_80 | tyrosine-type recombinase/integrase | - |
| FYK18_RS26070 (FYK18_26570) | 69117..69293 | - | 177 | WP_265451257.1 | serine/threonine protein kinase | - |
| FYK18_RS26075 (FYK18_26575) | 69389..69523 | + | 135 | Protein_82 | transcriptional regulator | - |
| FYK18_RS26080 (FYK18_26580) | 70094..70894 | + | 801 | WP_265451223.1 | Virulence regulon transcriptional activator VirF | VF |
| FYK18_RS26085 (FYK18_26585) | 71414..72617 | - | 1204 | Protein_84 | IS3 family transposase | - |
| FYK18_RS26090 (FYK18_26590) | 72899..73165 | - | 267 | WP_059242557.1 | PerC family transcriptional regulator | - |
| FYK18_RS26095 (FYK18_26595) | 73551..74726 | - | 1176 | WP_265451224.1 | hypothetical protein | - |
| FYK18_RS26100 (FYK18_26600) | 74767..75288 | - | 522 | WP_072244084.1 | fimbrial protein | - |
| FYK18_RS26105 (FYK18_26605) | 75369..76055 | - | 687 | WP_059242559.1 | molecular chaperone | - |
| FYK18_RS26110 (FYK18_26610) | 76046..78553 | - | 2508 | WP_265451225.1 | Outer membrane usher protein YraJ | VF |
| FYK18_RS26115 (FYK18_26620) | 79002..79705 | - | 704 | Protein_90 | molecular chaperone | - |
| FYK18_RS26120 (FYK18_26625) | 79775..80350 | - | 576 | WP_265451226.1 | S-fimbrial protein subunit SfaA | VF |
| FYK18_RS26125 (FYK18_26630) | 80567..80746 | - | 180 | Protein_92 | hypothetical protein | - |
| FYK18_RS26130 (FYK18_26635) | 80853..81035 | + | 183 | Protein_93 | IS21 family transposase ISSso4 | Transposase |
| FYK18_RS26135 (FYK18_26640) | 81169..81966 | - | 798 | WP_059242563.1 | IS21 family transposase IS21 | Transposase |
| FYK18_RS26140 (FYK18_26645) | 81966..83138 | - | 1173 | WP_265451227.1 | IS21 family transposase IS21 | Transposase |
| FYK18_RS26145 (FYK18_26650) | 83224..83970 | + | 747 | Protein_96 | IS3 family transposase ISKpn38 | Transposase |
| FYK18_RS26150 (FYK18_26655) | 84019..84787 | + | 769 | Protein_97 | IS3 family transposase IS2 | Transposase |
| FYK18_RS26155 (FYK18_26660) | 84923..85069 | - | 147 | Protein_98 | IS256 family transposase ISSde5 | Transposase |
| FYK18_RS26160 (FYK18_26665) | 85304..86251 | - | 948 | WP_059242586.1 | VirK/YbjX family protein | - |
| FYK18_RS26165 (FYK18_26670) | 86882..87879 | - | 998 | Protein_100 | Lipid A biosynthesis myristoyltransferase | VF |
| FYK18_RS26170 (FYK18_26675) | 87967..89073 | - | 1107 | WP_076742390.1 | glycosyltransferase family 4 protein | - |
| FYK18_RS26175 (FYK18_26680) | 89073..89894 | - | 822 | WP_059242583.1 | polysaccharide deacetylase family protein | - |
| FYK18_RS26180 (FYK18_26685) | 90486..90608 | - | 123 | Protein_103 | transcriptional regulator | - |
| FYK18_RS26185 (FYK18_26690) | 90678..91361 | - | 684 | Protein_104 | IS3 family transposase | - |
| FYK18_RS26190 (FYK18_26695) | 91771..92422 | + | 652 | Protein_105 | IS3 family transposase ISEc48 | Transposase |
| FYK18_RS26195 (FYK18_26700) | 92513..93741 | + | 1229 | WP_265451228.1 | IS3 family transposase IS2 | Transposase |
| FYK18_RS26200 | 93755..93989 | + | 235 | Protein_107 | transposase | - |
| FYK18_RS26205 (FYK18_26710) | 94021..95639 | - | 1619 | Protein_108 | ISL3 family transposase ISEc38 | Transposase |
| FYK18_RS26210 | 95734..96275 | + | 542 | Protein_109 | IS3 family transposase | - |
| FYK18_RS26215 (FYK18_26720) | 96312..96926 | - | 615 | Protein_110 | IS256 family transposase IS1414 | Transposase |
| FYK18_RS26220 (FYK18_26725) | 96933..97313 | - | 381 | WP_193126034.1 | helix-turn-helix domain-containing protein | - |
| FYK18_RS26225 (FYK18_26730) | 97401..98261 | + | 861 | WP_265451229.1 | Quinone oxidoreductase 2 | VF |
| FYK18_RS26230 | 98629..98892 | + | 264 | Protein_113 | plasmid pRiA4b ORF-3 family protein | - |
| FYK18_RS26235 | 98866..99027 | - | 162 | Protein_114 | hypothetical protein | - |
| FYK18_RS26240 (FYK18_26740) | 99035..99522 | - | 488 | Protein_115 | IS21 family transposase | - |
| FYK18_RS26245 (FYK18_26745) | 99576..102341 | - | 2766 | Protein_116 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| FYK18_RS26250 (FYK18_26750) | 102498..103079 | + | 582 | WP_265451230.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| FYK18_RS26255 (FYK18_26755) | 103137..103247 | + | 111 | Protein_118 | IS481 family transposase | - |
| FYK18_RS26260 (FYK18_26760) | 103452..104549 | - | 1098 | WP_059242420.1 | glycosyltransferase family 4 protein | - |
| FYK18_RS26265 (FYK18_26770) | 104958..105111 | - | 154 | Protein_120 | AAA family ATPase | - |
| FYK18_RS26275 (FYK18_26780) | 106361..106526 | - | 166 | Protein_122 | ATP-binding protein | - |
| FYK18_RS26280 (FYK18_26785) | 106547..106824 | - | 278 | Protein_123 | IS3 family transposase | - |
| FYK18_RS26285 (FYK18_26790) | 106823..107340 | - | 518 | Protein_124 | IS3 family transposase | - |
| FYK18_RS26290 (FYK18_26795) | 107597..108169 | + | 573 | WP_059242416.1 | hypothetical protein | - |
| FYK18_RS26295 (FYK18_26800) | 108780..110000 | + | 1221 | WP_059242415.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| FYK18_RS26300 (FYK18_26805) | 110000..112123 | + | 2124 | WP_265451232.1 | peptidase domain-containing ABC transporter | - |
| FYK18_RS26305 (FYK18_26810) | 112766..113344 | + | 579 | WP_059242411.1 | hypothetical protein | VF |
| FYK18_RS26310 (FYK18_26815) | 113362..114238 | - | 877 | Protein_129 | transposase | - |
| FYK18_RS26315 (FYK18_26820) | 114431..115189 | + | 759 | Protein_130 | IS3 family transposase | - |
| FYK18_RS26320 (FYK18_26825) | 115308..116879 | - | 1572 | WP_243172446.1 | IS66 family transposase ISCro1 | Transposase |
| FYK18_RS26325 (FYK18_26830) | 116899..117246 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FYK18_RS26330 (FYK18_26835) | 117246..117896 | - | 651 | WP_243172445.1 | IS66 family transposase IS679 | Transposase |
| FYK18_RS26335 (FYK18_26840) | 118000..118281 | - | 282 | WP_000780220.1 | helix-turn-helix transcriptional regulator | - |
| FYK18_RS26340 (FYK18_26845) | 118262..118591 | - | 330 | WP_265451233.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FYK18_RS26345 (FYK18_26860) | 119532..120389 | - | 858 | WP_149553329.1 | incFII family plasmid replication initiator RepA | - |
| FYK18_RS26350 | 120408..120586 | - | 179 | Protein_137 | protein CopA/IncA | - |
| FYK18_RS26355 (FYK18_26875) | 120680..120940 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| FYK18_RS26360 (FYK18_26880) | 121180..121770 | - | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| FYK18_RS26365 (FYK18_26885) | 121809..122018 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| FYK18_RS26370 (FYK18_26890) | 122064..122525 | - | 462 | WP_000978818.1 | thermonuclease family protein | - |
| FYK18_RS26375 (FYK18_26895) | 122771..122983 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| FYK18_RS26380 (FYK18_26900) | 123119..123679 | - | 561 | WP_059249357.1 | fertility inhibition protein FinO | - |
| FYK18_RS26385 (FYK18_26905) | 123734..124480 | - | 747 | WP_059249359.1 | conjugal transfer pilus acetylase TraX | - |
| FYK18_RS26390 (FYK18_26910) | 124500..129770 | - | 5271 | WP_265451234.1 | Multifunctional conjugation protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|