MGE detailed information
MGE type: Conjugative plasmid MGE length: 67616 bp
Accession: NZ_CP043229 Location: 1..67616 Organism: Escherichia coli strain Ec-050 Replicon: plasmid pEc-050-CMY-2
Accession: NZ_CP043229 Location: 1..67616 Organism: Escherichia coli strain Ec-050 Replicon: plasmid pEc-050-CMY-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FX998_RS24200 () | 2..757 | - | 756 | Protein_0 | alpha/beta hydrolase | - |
| FX998_RS24205 () | 816..1562 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| FX998_RS24210 () | 1582..6852 | - | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| FX998_RS24215 () | 6852..9041 | - | 2190 | WP_017901267.1 | type IV conjugative transfer system coupling protein TraD | - |
| FX998_RS24220 () | 9092..9829 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| FX998_RS24225 () | 10032..10763 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| FX998_RS24230 () | 10812..11297 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| FX998_RS24235 () | 11313..14135 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FX998_RS24240 () | 14132..15505 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| FX998_RS24245 () | 15492..15917 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| FX998_RS24250 () | 15865..16212 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| FX998_RS24255 () | 16142..16687 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FX998_RS24260 () | 16674..16958 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FX998_RS24265 () | 17077..17421 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| FX998_RS24270 () | 17435..18178 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FX998_RS24275 () | 18171..18428 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| FX998_RS24280 () | 18455..20305 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FX998_RS24285 () | 20302..20940 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FX998_RS24290 () | 20949..21254 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| FX998_RS24295 () | 21284..22276 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| FX998_RS24300 () | 22273..22905 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| FX998_RS24305 () | 22902..23288 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| FX998_RS24310 () | 23285..25915 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| FX998_RS24315 () | 26041..26388 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| FX998_RS24320 () | 26416..26634 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| FX998_RS24325 () | 26714..27190 | - | 477 | WP_000549587.1 | hypothetical protein | - |
| FX998_RS24330 () | 27183..27404 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| FX998_RS24335 () | 27539..28054 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FX998_RS24340 () | 28051..28419 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| FX998_RS24345 () | 28358..28945 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| FX998_RS24350 () | 28914..30365 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| FX998_RS24355 () | 30365..31093 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| FX998_RS24360 () | 31080..31646 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| FX998_RS24365 () | 31668..31979 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| FX998_RS24370 () | 31994..32353 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| FX998_RS24375 () | 32386..32613 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| FX998_RS24380 () | 32750..33421 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| FX998_RS24385 () | 33615..33998 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| FX998_RS24395 () | 34321..34923 | + | 603 | WP_000243713.1 | hypothetical protein | VF |
| FX998_RS24400 () | 35220..36041 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| FX998_RS24405 () | 36152..36448 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| FX998_RS24415 () | 36674..36867 | - | 194 | Protein_41 | hypothetical protein | - |
| FX998_RS24425 () | 37363..37521 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 37565..37789 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 37565..37789 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 37565..37789 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 37565..37789 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| FX998_RS25520 () | 37601..37780 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| FX998_RS24430 () | 37801..38520 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| FX998_RS24435 () | 38517..38951 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| FX998_RS24440 () | 39020..41043 | - | 2024 | Protein_46 | ParB/RepB/Spo0J family partition protein | - |
| FX998_RS24445 () | 41104..41337 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| FX998_RS24450 () | 41395..41922 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| FX998_RS24460 () | 42150..42343 | - | 194 | Protein_49 | hypothetical protein | - |
| FX998_RS24465 () | 42688..43005 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| FX998_RS24470 () | 43002..43535 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| FX998_RS24475 () | 43629..44774 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| FX998_RS24480 () | 45171..45359 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| FX998_RS24485 () | 45369..46568 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| FX998_RS24490 () | 46741..47376 | + | 636 | Protein_55 | HNH endonuclease | - |
| FX998_RS24500 () | 47692..47883 | - | 192 | WP_001024835.1 | hypothetical protein | - |
| FX998_RS24505 () | 47880..48302 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| FX998_RS24510 () | 48349..48651 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| FX998_RS24515 () | 48747..49319 | - | 573 | WP_011161242.1 | YubH family protein | - |
| FX998_RS25525 () | 49204..49968 | - | 765 | Protein_60 | hypothetical protein | - |
| FX998_RS24525 () | 50019..50453 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| FX998_RS24530 () | 50467..50688 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| FX998_RS24535 () | 50689..51372 | - | 684 | WP_000085883.1 | DNA methylase | - |
| FX998_RS24545 () | 51449..51742 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| FX998_RS24550 () | 51890..52852 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| FX998_RS24555 () | 52855..53205 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| FX998_RS24560 () | 53328..53609 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| FX998_RS24565 () | 53737..53971 | - | 235 | Protein_68 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FX998_RS24580 () | 55420..56117 | - | 698 | Protein_69 | IS1 family transposase IS1R | Transposase |
| FX998_RS25530 () | 56765..56935 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| FX998_RS24590 () | 56880..57617 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| FX998_RS24595 () | 57743..57838 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| FX998_RS24600 () | 57973..58677 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| FX998_RS24605 () | 58743..59288 | + | 546 | Protein_74 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FX998_RS24610 () | 59324..59739 | - | 416 | Protein_75 | IS1 family transposase IS1R | Transposase |
| FX998_RS24615 () | 59988..60389 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FX998_RS24620 () | 60322..60579 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FX998_RS24625 () | 60672..61325 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| FX998_RS25535 () | 61423..61563 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| FX998_RS24635 () | 62264..63121 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| FX998_RS24640 () | 63114..63188 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| FX998_RS24650 () | 63426..63680 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| FX998_RS24655 () | 63920..64510 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| FX998_RS24660 () | 64548..64757 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| FX998_RS24665 () | 64803..65264 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| FX998_RS24670 () | 65509..65721 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| FX998_RS24675 () | 65850..66410 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| FX998_RS25540 () | 66513..66839 | - | 327 | WP_172620314.1 | AAA family ATPase | - |
| FX998_RS25545 () | 67046..67582 | - | 537 | WP_172620313.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|