MGE detailed information
MGE type: Mobilizable plasmid MGE length: 64997 bp
Accession: NZ_CP043220 Location: 1..64997 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: plasmid pET6.3-IncI2
Accession: NZ_CP043220 Location: 1..64997 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: plasmid pET6.3-IncI2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA02_RS26515 () | 1..1029 | + | 1029 | WP_001175215.1 | replication initiation protein | - |
| FYA02_RS27160 () | 2078..2239 | + | 162 | WP_001128311.1 | hypothetical protein | - |
| FYA02_RS26530 () | 2433..2594 | + | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| FYA02_RS26535 () | 2744..3340 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| FYA02_RS27165 () | 3358..3642 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| FYA02_RS26545 () | 3716..4381 | - | 666 | WP_000532148.1 | P-loop NTPase | - |
| FYA02_RS26555 () | 4970..5299 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| FYA02_RS26560 () | 5703..6218 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| FYA02_RS26565 () | 6322..6864 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| FYA02_RS26570 () | 6861..7115 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| FYA02_RS26575 () | 7112..7354 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| FYA02_RS26580 () | 7925..8218 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| FYA02_RS26585 () | 8628..8810 | - | 183 | WP_024135751.1 | hypothetical protein | - |
| FYA02_RS26590 () | 9368..9550 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| FYA02_RS26595 () | 9575..10012 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| FYA02_RS26600 () | 10143..10463 | - | 321 | WP_001401701.1 | hypothetical protein | - |
| FYA02_RS26610 () | 10797..10975 | - | 179 | Protein_16 | hypothetical protein | - |
| FYA02_RS26615 () | 10977..11180 | - | 204 | WP_000224735.1 | hypothetical protein | - |
| FYA02_RS26620 () | 11186..11635 | - | 450 | WP_000206700.1 | hypothetical protein | - |
| FYA02_RS26625 () | 11655..12362 | - | 708 | WP_000108791.1 | hypothetical protein | - |
| FYA02_RS26630 () | 12364..13116 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| FYA02_RS26635 () | 13134..13535 | - | 402 | WP_000717863.1 | hypothetical protein | - |
| FYA02_RS26640 () | 13904..14245 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| FYA02_RS26645 () | 14242..18507 | + | 4266 | WP_148871300.1 | relaxase | - |
| FYA02_RS27170 () | 18550..18990 | - | 441 | WP_000666080.1 | hypothetical protein | - |
| FYA02_RS26655 () | 19515..19721 | - | 207 | WP_000850853.1 | hemolysin expression modulator Hha | - |
| FYA02_RS26660 () | 19910..20194 | + | 285 | WP_000509516.1 | hypothetical protein | - |
| FYA02_RS26665 () | 20203..20409 | - | 207 | WP_021563360.1 | hypothetical protein | - |
| FYA02_RS26670 () | 20653..22809 | - | 2157 | WP_015059543.1 | type IA DNA topoisomerase | - |
| FYA02_RS26675 () | 22814..23389 | - | 576 | WP_001358168.1 | hypothetical protein | - |
| FYA02_RS26680 () | 23559..25235 | - | 1677 | WP_000289345.1 | PcfJ domain-containing protein | - |
| FYA02_RS26685 () | 25330..25845 | - | 516 | WP_000698400.1 | thermonuclease family protein | - |
| FYA02_RS26690 () | 25892..26545 | - | 654 | WP_000572553.1 | hypothetical protein | - |
| FYA02_RS26695 () | 26557..27681 | - | 1125 | WP_000486714.1 | site-specific integrase | - |
| FYA02_RS26710 () | 28307..29569 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| FYA02_RS26715 () | 29893..31038 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| FYA02_RS26720 () | 31132..31665 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| FYA02_RS26725 () | 31662..31979 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| FYA02_RS26760 () | 33858..35144 | - | 1287 | WP_015059540.1 | hypothetical protein | VF |
| FYA02_RS26765 () | 35157..35792 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| FYA02_RS26770 () | 35796..36278 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| FYA02_RS26775 () | 36344..36901 | - | 558 | WP_000095048.1 | hypothetical protein | - |
| FYA02_RS26780 () | 36946..38055 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| FYA02_RS26785 () | 38046..39584 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| FYA02_RS26790 () | 39609..40103 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| FYA02_RS26795 () | 40087..41409 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| FYA02_RS26800 () | 41448..43091 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| FYA02_RS26805 () | 43084..43614 | - | 531 | WP_001220542.1 | sigma 54-interacting transcriptional regulator | - |
| FYA02_RS26810 () | 43661..45619 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| FYA02_RS26815 () | 45635..46690 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| FYA02_RS26820 () | 46709..47848 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| FYA02_RS26825 () | 47838..48539 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| FYA02_RS26830 () | 48605..49339 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| FYA02_RS26835 () | 49339..49473 | - | 135 | WP_023155252.1 | hypothetical protein | - |
| FYA02_RS26840 () | 49505..51862 | - | 2358 | WP_000548955.1 | VirB4 family type IV secretion system protein | - |
| FYA02_RS26845 () | 51868..52188 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| FYA02_RS26850 () | 52259..52447 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| FYA02_RS26855 () | 52549..53133 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| FYA02_RS26860 () | 53154..53552 | - | 399 | WP_001153665.1 | hypothetical protein | - |
| FYA02_RS26865 () | 53671..54108 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| FYA02_RS26870 () | 54114..55349 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| FYA02_RS26875 () | 55352..55651 | - | 300 | WP_000835764.1 | IncN plasmid KikA protein | - |
| FYA02_RS26880 () | 55719..56000 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FYA02_RS26885 () | 55990..56241 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| FYA02_RS26890 () | 56341..56976 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| FYA02_RS26895 () | 57024..57856 | + | 833 | Protein_65 | DNA primase | - |
| FYA02_RS26900 () | 57893..58129 | - | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| FYA02_RS26905 () | 58133..58780 | - | 648 | WP_000653673.1 | hypothetical protein | VF |
| FYA02_RS26910 () | 58786..59772 | - | 987 | WP_001028544.1 | type IV secretion system protein | - |
| FYA02_RS26915 () | 59776..60033 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| FYA02_RS26920 () | 60030..60332 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| FYA02_RS26930 () | 60603..61049 | - | 447 | WP_001243164.1 | hypothetical protein | - |
| FYA02_RS27175 () | 61060..61230 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| FYA02_RS26935 () | 61234..61677 | - | 444 | WP_000964331.1 | NfeD family protein | - |
| FYA02_RS26945 () | 62051..63004 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| FYA02_RS27180 () | 63031..63207 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| FYA02_RS26950 () | 63200..63415 | - | 216 | WP_000049866.1 | DUF1187 family protein | - |
| FYA02_RS26955 () | 63408..63914 | - | 507 | WP_001358485.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|