MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 102028 bp
Accession: NZ_CP043218 Location: 1..102028 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: plasmid pET6.1-IncY
Accession: NZ_CP043218 Location: 1..102028 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: plasmid pET6.1-IncY
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA02_RS25265 () | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| FYA02_RS25275 () | 1419..2615 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| FYA02_RS25280 () | 2632..3633 | + | 1002 | WP_042032541.1 | ParB/RepB/Spo0J family partition protein | - |
| FYA02_RS25285 () | 3859..5565 | + | 1707 | WP_059338140.1 | hypothetical protein | - |
| FYA02_RS25290 () | 5626..7215 | + | 1590 | WP_148880105.1 | hypothetical protein | - |
| FYA02_RS25295 () | 7225..8040 | + | 816 | WP_148880106.1 | hypothetical protein | - |
| FYA02_RS25300 () | 8076..8657 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| FYA02_RS25305 () | 8669..9178 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| FYA02_RS25310 () | 9295..9450 | - | 156 | WP_023156625.1 | type I toxin-antitoxin system toxin HokD | - |
| FYA02_RS25315 () | 9632..9877 | - | 246 | WP_069723463.1 | hypothetical protein | - |
| FYA02_RS25320 () | 9928..10773 | - | 846 | WP_023154394.1 | hypothetical protein | - |
| FYA02_RS25325 () | 10803..11603 | - | 801 | WP_001187871.1 | phage antirepressor KilAC domain-containing protein | - |
| FYA02_RS25330 () | 11767..12801 | - | 1035 | WP_069723457.1 | phage antirepressor KilAC domain-containing protein | - |
| FYA02_RS25335 () | 12798..13019 | - | 222 | WP_000245709.1 | host cell division inhibitor Icd-like protein | - |
| FYA02_RS25345 () | 13639..14151 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| FYA02_RS25350 () | 14155..14694 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| FYA02_RS25355 () | 14775..15341 | + | 567 | WP_069723458.1 | hypothetical protein | - |
| FYA02_RS25360 () | 15535..16314 | - | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| FYA02_RS25365 () | 16314..17336 | - | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| FYA02_RS25370 () | 17423..18352 | + | 930 | Protein_19 | tail fiber protein | - |
| FYA02_RS25375 () | 18352..18969 | + | 618 | WP_032163793.1 | tail fiber assembly protein | - |
| FYA02_RS25380 () | 18933..19478 | - | 546 | WP_032163794.1 | Serine acetyltransferase | VF |
| FYA02_RS25390 () | 20502..20831 | + | 330 | WP_000887652.1 | holin | - |
| FYA02_RS25395 () | 20828..21271 | + | 444 | WP_033553843.1 | lysis protein | - |
| FYA02_RS25400 () | 21258..21860 | + | 603 | WP_033553842.1 | hypothetical protein | - |
| FYA02_RS25405 () | 21862..23781 | + | 1920 | WP_033553841.1 | phage protein DarA | - |
| FYA02_RS25410 () | 23778..24143 | + | 366 | WP_033553840.1 | hypothetical protein | - |
| FYA02_RS25415 () | 24156..27143 | + | 2988 | WP_063119506.1 | hypothetical protein | - |
| FYA02_RS25420 () | 27133..27438 | + | 306 | WP_001165940.1 | hypothetical protein | - |
| FYA02_RS25425 () | 28178..28477 | + | 300 | Protein_29 | Outer membrane porin protein OmpD | VF |
| FYA02_RS25435 () | 29788..30603 | + | 816 | Protein_31 | porin | - |
| FYA02_RS25440 () | 30837..31325 | - | 489 | WP_063099965.1 | single-stranded DNA-binding protein | - |
| FYA02_RS25445 () | 31495..32052 | + | 558 | WP_042032566.1 | lysozyme | - |
| FYA02_RS25455 () | 32344..33363 | - | 1020 | WP_000132937.1 | head processing protein | - |
| FYA02_RS25460 () | 33356..35065 | - | 1710 | WP_069723461.1 | phage portal protein | - |
| FYA02_RS25465 () | 35142..41909 | + | 6768 | WP_069723462.1 | N-6 DNA methylase | - |
| FYA02_RS25470 () | 41943..42383 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| FYA02_RS25475 () | 42380..42628 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| FYA02_RS25480 () | 42687..43196 | - | 510 | WP_024245513.1 | hypothetical protein | - |
| FYA02_RS25485 () | 43196..44236 | - | 1041 | WP_059338150.1 | hypothetical protein | - |
| FYA02_RS25490 () | 44327..44968 | - | 642 | WP_024245511.1 | hypothetical protein | - |
| FYA02_RS25495 () | 45158..45679 | - | 522 | WP_148880107.1 | Ref family protein | - |
| FYA02_RS25500 () | 45697..45990 | - | 294 | Protein_43 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FYA02_RS25505 () | 46179..47756 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| FYA02_RS25510 () | 48066..48626 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| FYA02_RS25515 () | 48630..51596 | + | 2967 | WP_148880108.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FYA02_RS25520 () | 51629..53311 | - | 1683 | Protein_47 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| FYA02_RS25525 () | 53437..54051 | + | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| FYA02_RS25530 () | 54116..55245 | + | 1130 | WP_085959879.1 | IS3 family transposase IS1133 | Transposase |
| FYA02_RS25535 () | 55352..56155 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| FYA02_RS25540 () | 56155..56991 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| FYA02_RS25545 () | 57087..60092 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FYA02_RS25550 () | 60256..60813 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| FYA02_RS25555 () | 60996..61856 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| FYA02_RS25565 () | 62310..62621 | - | 312 | WP_148880109.1 | lysogeny establishment protein | - |
| FYA02_RS25570 () | 62672..63703 | - | 1032 | WP_046660036.1 | tyrosine-type recombinase/integrase | - |
| FYA02_RS25575 () | 63711..63932 | - | 222 | WP_000542332.1 | hypothetical protein | - |
| FYA02_RS25590 () | 64536..64745 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| FYA02_RS25595 () | 64856..65707 | + | 852 | WP_000611666.1 | hypothetical protein | - |
| FYA02_RS25600 () | 65740..66855 | - | 1116 | WP_016231383.1 | phage antirepressor Ant | - |
| FYA02_RS25605 () | 66852..67211 | - | 360 | Protein_61 | host cell division inhibitor Icd-like protein | - |
| FYA02_RS25610 () | 67433..68917 | - | 1485 | WP_000124150.1 | terminase | - |
| FYA02_RS25615 () | 68917..70110 | - | 1194 | WP_148880110.1 | terminase | - |
| FYA02_RS25620 () | 70196..70648 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| FYA02_RS25625 () | 70737..71780 | - | 1044 | WP_148880111.1 | DUF968 domain-containing protein | - |
| FYA02_RS25630 () | 71808..71987 | - | 180 | WP_001339207.1 | hypothetical protein | - |
| FYA02_RS25635 () | 71992..72372 | - | 381 | WP_137471994.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| FYA02_RS25640 () | 72372..72593 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FYA02_RS25645 () | 72776..74332 | + | 1557 | WP_148880117.1 | type I restriction-modification system subunit M | - |
| FYA02_RS25650 () | 74329..75549 | + | 1221 | WP_148880112.1 | restriction endonuclease subunit S | - |
| FYA02_RS25655 () | 75671..78787 | + | 3117 | WP_029701843.1 | HsdR family type I site-specific deoxyribonuclease | - |
| FYA02_RS25660 () | 79052..79558 | - | 507 | WP_148880113.1 | 3'-phosphatase | - |
| FYA02_RS25665 () | 79631..80893 | - | 1263 | WP_148880114.1 | hypothetical protein | - |
| FYA02_RS25680 () | 81549..82762 | + | 1214 | WP_181657866.1 | IS3 family transposase IS629 | Transposase |
| FYA02_RS25685 () | 82805..83209 | - | 405 | Protein_75 | hypothetical protein | - |
| FYA02_RS25690 () | 83206..83883 | - | 678 | WP_148880115.1 | metallophosphoesterase | - |
| FYA02_RS25695 () | 83880..84506 | - | 627 | WP_000484110.1 | norphogenetic protein | - |
| FYA02_RS25700 () | 84404..85066 | - | 663 | WP_012817939.1 | hypothetical protein | - |
| FYA02_RS25705 () | 85008..85163 | - | 156 | WP_000096174.1 | hypothetical protein | - |
| FYA02_RS25710 () | 85230..85808 | - | 579 | WP_000943615.1 | VRR-NUC domain-containing protein | - |
| FYA02_RS25715 () | 85811..86056 | - | 246 | WP_000840930.1 | hypothetical protein | - |
| FYA02_RS25720 () | 86203..86580 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| FYA02_RS25725 () | 86590..87807 | + | 1218 | WP_001141908.1 | hypothetical protein | - |
| FYA02_RS25730 () | 87811..88539 | + | 729 | WP_000896806.1 | hypothetical protein | - |
| FYA02_RS25735 () | 88526..89311 | + | 786 | WP_046659850.1 | hypothetical protein | - |
| FYA02_RS25740 () | 89313..90329 | + | 1017 | WP_000212027.1 | hypothetical protein | - |
| FYA02_RS25745 () | 90322..90954 | + | 633 | WP_000535205.1 | hypothetical protein | - |
| FYA02_RS25750 () | 91001..91999 | - | 999 | WP_001198652.1 | hypothetical protein | - |
| FYA02_RS25755 () | 91999..93363 | - | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| FYA02_RS25770 () | 93836..94000 | - | 165 | WP_000234831.1 | DUF3927 family protein | - |
| FYA02_RS25775 () | 94000..94425 | - | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| FYA02_RS25795 () | 95983..98248 | - | 2266 | Protein_92 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| FYA02_RS25800 () | 98245..99150 | - | 906 | WP_148880116.1 | recombination-associated protein RdgC | - |
| FYA02_RS25805 () | 99143..99427 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| FYA02_RS25815 () | 99890..100678 | + | 789 | WP_001569402.1 | hypothetical protein | - |
| FYA02_RS25820 () | 100718..101140 | + | 423 | WP_000007765.1 | hypothetical protein | - |
| FYA02_RS25825 () | 101318..101710 | + | 393 | WP_059338141.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|