MGE detailed information
MGE type: Prophage MGE length: 64375 bp
Accession: NZ_CP043217 Location: 460890..525264 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: chromosome
Accession: NZ_CP043217 Location: 460890..525264 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA02_RS02310 () | 457404..458150 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| FYA02_RS02315 () | 458239..458925 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FYA02_RS02320 () | 459102..459305 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FYA02_RS02325 () | 459341..460801 | - | 1461 | WP_000527813.1 | mannitol dehydrogenase family protein | - |
| FYA02_RS02330 () | 460890..462173 | - | 1284 | Protein_451 | MHS family MFS transporter YdfJ | - |
| FYA02_RS02335 () | 462778..462891 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| FYA02_RS02340 () | 462960..463193 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FYA02_RS02345 () | 463510..464100 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FYA02_RS02350 () | 464198..464773 | - | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| FYA02_RS02355 () | 464773..467796 | - | 3024 | WP_148880008.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FYA02_RS02360 () | 467861..468460 | - | 600 | WP_001230317.1 | hypothetical protein | VF |
| FYA02_RS02365 () | 468527..471925 | - | 3399 | WP_148880009.1 | host specificity protein J | - |
| FYA02_RS02370 () | 471986..472633 | - | 648 | WP_023277304.1 | tail assembly protein | - |
| FYA02_RS02375 () | 472531..473274 | - | 744 | WP_020219026.1 | C40 family peptidase | - |
| FYA02_RS02380 () | 473279..473977 | - | 699 | WP_020219025.1 | phage minor tail protein L | - |
| FYA02_RS02385 () | 473987..474316 | - | 330 | WP_000447253.1 | phage tail protein | - |
| FYA02_RS02390 () | 474316..477381 | - | 3066 | WP_148880010.1 | phage tail tape measure protein | - |
| FYA02_RS02395 () | 477353..477682 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| FYA02_RS02400 () | 477691..478077 | - | 387 | WP_001297778.1 | phage minor tail protein G | - |
| FYA02_RS02405 () | 478138..478881 | - | 744 | WP_000211109.1 | phage tail protein | - |
| FYA02_RS02410 () | 478893..479294 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| FYA02_RS02415 () | 479291..479869 | - | 579 | WP_020219021.1 | phage tail protein | - |
| FYA02_RS02420 () | 479881..480156 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| FYA02_RS02425 () | 480149..480472 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| FYA02_RS02430 () | 480559..482586 | - | 2028 | WP_001136587.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| FYA02_RS02435 () | 482531..484111 | - | 1581 | WP_011478361.1 | phage portal protein | - |
| FYA02_RS02440 () | 484039..484251 | - | 213 | WP_020219018.1 | hypothetical protein | - |
| FYA02_RS02445 () | 484248..486350 | - | 2103 | WP_020219017.1 | phage terminase large subunit family protein | - |
| FYA02_RS02450 () | 486350..486844 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| FYA02_RS02465 () | 487397..487603 | - | 207 | WP_000548593.1 | hypothetical protein | - |
| FYA02_RS02470 () | 487899..488072 | - | 174 | WP_001019207.1 | addiction module toxin, GnsA/GnsB family | - |
| FYA02_RS02475 () | 488245..488400 | - | 156 | WP_001443523.1 | hypothetical protein | - |
| FYA02_RS02480 () | 488548..488736 | - | 189 | WP_071526745.1 | cold-shock protein | - |
| FYA02_RS02485 () | 488747..488959 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FYA02_RS02490 () | 489323..489820 | - | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| FYA02_RS02495 () | 489817..490350 | - | 534 | WP_001092971.1 | lysozyme | - |
| FYA02_RS02500 () | 490347..490658 | - | 312 | WP_000189918.1 | DUF1327 domain-containing protein | - |
| FYA02_RS02505 () | 490663..490878 | - | 216 | WP_000839587.1 | phage lysis protein EssD | - |
| FYA02_RS02510 () | 491069..491782 | - | 714 | WP_000120340.1 | HTH-type transcriptional activator RhaR | VF |
| FYA02_RS02515 () | 492189..493148 | - | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| FYA02_RS02520 () | 493341..493865 | + | 525 | WP_148880011.1 | outer membrane lipoprotein Blc | - |
| FYA02_RS02525 () | 494021..494398 | - | 378 | WP_001204787.1 | antitermination protein | - |
| FYA02_RS02530 () | 494416..495465 | - | 1050 | WP_001265276.1 | DUF968 domain-containing protein | - |
| FYA02_RS02535 () | 495467..495745 | - | 279 | WP_023147795.1 | hypothetical protein | - |
| FYA02_RS02540 () | 495812..496063 | - | 252 | WP_000980999.1 | hypothetical protein | - |
| FYA02_RS02545 () | 496280..496435 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FYA02_RS02550 () | 496507..496794 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FYA02_RS02555 () | 496794..497033 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FYA02_RS02560 () | 497058..497363 | + | 306 | WP_071600497.1 | hypothetical protein | - |
| FYA02_RS02565 () | 497566..497652 | + | 87 | Protein_496 | protein FlxA | - |
| FYA02_RS02570 () | 497707..498404 | + | 698 | Protein_497 | IS1 family transposase IS1A | Transposase |
| FYA02_RS02575 () | 498423..498674 | + | 252 | WP_075362600.1 | FlxA-like family protein | - |
| FYA02_RS02580 () | 499123..500336 | + | 1214 | WP_181657866.1 | IS3 family transposase IS629 | Transposase |
| FYA02_RS02590 () | 500424..501764 | - | 1341 | WP_148880013.1 | ISNCY family transposase ISCARN112 | Transposase |
| FYA02_RS02595 () | 502246..503268 | - | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| FYA02_RS02600 () | 503271..503885 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| FYA02_RS02605 () | 504094..504759 | - | 666 | WP_021513618.1 | epoxyqueuosine reductase QueH | - |
| FYA02_RS02610 () | 504962..505360 | - | 399 | WP_148880014.1 | DUF977 family protein | - |
| FYA02_RS02615 () | 505401..506366 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| FYA02_RS02620 () | 506347..506868 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| FYA02_RS02625 () | 506852..507079 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| FYA02_RS02630 () | 507157..507564 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| FYA02_RS02635 () | 507757..507909 | + | 153 | WP_000379591.1 | DUF1391 family protein | - |
| FYA02_RS02640 () | 507909..508286 | + | 378 | WP_001241299.1 | hypothetical protein | - |
| FYA02_RS02645 () | 508255..508542 | - | 288 | WP_001328010.1 | hypothetical protein | - |
| FYA02_RS02650 () | 508958..509146 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FYA02_RS02655 () | 509143..509334 | + | 192 | WP_001083273.1 | lysis protein YdfD | - |
| FYA02_RS02660 () | 509428..510378 | + | 951 | WP_148880015.1 | exonuclease | - |
| FYA02_RS02680 () | 512957..514525 | + | 1569 | Protein_517 | 3'-5' exoribonuclease | - |
| FYA02_RS02685 () | 514598..514849 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| FYA02_RS02690 () | 514884..516164 | + | 1281 | WP_148880017.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| FYA02_RS02695 () | 516184..516294 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| FYA02_RS02700 () | 516352..517371 | - | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| FYA02_RS02705 () | 517383..518597 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FYA02_RS02710 () | 518803..519129 | - | 327 | WP_001295395.1 | YnfA family protein | - |
| FYA02_RS02715 () | 519264..519605 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| FYA02_RS02720 () | 519640..520200 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| FYA02_RS02725 () | 520203..520913 | - | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| FYA02_RS02730 () | 521021..521326 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| FYA02_RS02735 () | 521525..523135 | + | 1611 | Protein_528 | molybdopterin-dependent oxidoreductase | - |
| FYA02_RS02750 () | 524446..525264 | + | 819 | Protein_530 | dimethyl sulfoxide reductase subunit A | - |
| FYA02_RS02755 () | 525325..527748 | + | 2424 | WP_072169196.1 | dimethyl sulfoxide reductase subunit A | - |
| FYA02_RS02760 () | 527759..528376 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| FYA02_RS02765 () | 528378..529232 | + | 855 | WP_000526477.1 | dimethyl sulfoxide reductase anchor subunit | - |
| FYA02_RS02770 () | 529275..529889 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|