MGE detailed information
MGE type: Prophage MGE length: 44983 bp
Accession: NZ_CP043217 Location: 3694007..3738989 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: chromosome
Accession: NZ_CP043217 Location: 3694007..3738989 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA02_RS18335 () | 3689583..3690725 | - | 1143 | WP_000935765.1 | type III secretion system translocon subunit SctE | - |
| FYA02_RS18340 () | 3690738..3691316 | - | 579 | WP_000381555.1 | type III secretion system LEE translocon filament protein EspA | - |
| FYA02_RS18345 () | 3691374..3692429 | - | 1056 | WP_069723470.1 | type III secretion system LEE gatekeeper SepL | - |
| FYA02_RS18350 () | 3692572..3693792 | + | 1221 | WP_000953242.1 | type III secretion system LEE inner membrane ring protein EscD | - |
| FYA02_RS18355 () | 3694007..3696826 | - | 2820 | WP_029399090.1 | hypothetical protein | VF |
| FYA02_RS18360 () | 3696887..3697357 | - | 471 | WP_000098786.1 | hypothetical protein | VF |
| FYA02_RS18365 () | 3697490..3699106 | - | 1617 | WP_069723472.1 | hypothetical protein | VF |
| FYA02_RS18370 () | 3699552..3700163 | - | 612 | WP_000492643.1 | hypothetical protein | VF |
| FYA02_RS18375 () | 3700414..3700773 | + | 360 | WP_001005230.1 | hypothetical protein | VF |
| FYA02_RS18380 () | 3700992..3701507 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| FYA02_RS18385 () | 3701538..3702455 | - | 918 | WP_001050796.1 | hypothetical protein | VF |
| FYA02_RS18390 () | 3702418..3702834 | - | 417 | WP_001360070.1 | hypothetical protein | VF |
| FYA02_RS18395 () | 3702827..3703147 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| FYA02_RS18400 () | 3703207..3704547 | - | 1341 | WP_000599711.1 | ATP synthase subunit beta | VF |
| FYA02_RS18405 () | 3704531..3706558 | - | 2028 | WP_001037820.1 | hypothetical protein | VF |
| FYA02_RS18410 () | 3706555..3706908 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| FYA02_RS18415 () | 3707110..3707412 | + | 303 | WP_000338345.1 | hypothetical protein | VF |
| FYA02_RS18420 () | 3707496..3707873 | + | 378 | WP_001059795.1 | hypothetical protein | VF |
| FYA02_RS18425 () | 3707875..3708447 | + | 573 | WP_001233825.1 | hypothetical protein | VF |
| FYA02_RS18430 () | 3708453..3708908 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| FYA02_RS18435 () | 3708908..3710446 | + | 1539 | WP_000723928.1 | hypothetical protein | VF |
| FYA02_RS18440 () | 3710460..3710915 | + | 456 | WP_000087468.1 | hypothetical protein | VF |
| FYA02_RS18445 () | 3711301..3711714 | - | 414 | WP_000444181.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| FYA02_RS18450 () | 3711789..3712145 | - | 357 | WP_148880086.1 | negative regulator GrlR | - |
| FYA02_RS18455 () | 3712342..3712800 | + | 459 | WP_001360068.1 | hypothetical protein | VF |
| FYA02_RS18460 () | 3712797..3713834 | - | 1038 | WP_001291685.1 | hypothetical protein | VF |
| FYA02_RS18465 () | 3713827..3714603 | - | 777 | WP_001002808.1 | hypothetical protein | VF |
| FYA02_RS18470 () | 3714603..3714872 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| FYA02_RS18475 () | 3714872..3715525 | - | 654 | WP_001360067.1 | hypothetical protein | VF |
| FYA02_RS18480 () | 3715530..3716183 | - | 654 | WP_000780747.1 | hypothetical protein | VF |
| FYA02_RS18485 () | 3716170..3716769 | - | 600 | WP_000153999.1 | hypothetical protein | VF |
| FYA02_RS18490 () | 3716766..3717080 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| FYA02_RS18495 () | 3717093..3717311 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| FYA02_RS18500 () | 3717326..3717697 | - | 372 | WP_001298763.1 | type III secretion system LEE master regulator Ler | - |
| FYA02_RS18505 () | 3718904..3720049 | + | 1146 | WP_000606967.1 | hypothetical protein | VF |
| FYA02_RS18510 () | 3720196..3721014 | + | 819 | WP_000829099.1 | YjiK family protein | - |
| FYA02_RS18515 () | 3721220..3722095 | + | 876 | WP_000491536.1 | hypothetical protein | VF |
| FYA02_RS18520 () | 3722335..3722508 | - | 174 | Protein_3542 | N-acetyltransferase | - |
| FYA02_RS18525 () | 3722744..3723288 | + | 545 | Protein_3543 | IS3 family transposase ISEc31 | Transposase |
| FYA02_RS18530 () | 3723374..3724396 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| FYA02_RS18535 () | 3724396..3725175 | + | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| FYA02_RS18540 () | 3725242..3725484 | + | 243 | Protein_3546 | IS3 family transposase ISEc31 | Transposase |
| FYA02_RS18550 () | 3726792..3727229 | + | 438 | Protein_3548 | DDE-type integrase/transposase/recombinase | - |
| FYA02_RS18555 () | 3727239..3727790 | + | 552 | Protein_3549 | DUF945 domain-containing protein | - |
| FYA02_RS18560 () | 3727790..3728035 | + | 246 | WP_001164975.1 | hypothetical protein | - |
| FYA02_RS18565 () | 3728129..3728602 | + | 474 | WP_053879022.1 | antirestriction protein | - |
| FYA02_RS18570 () | 3728618..3729094 | + | 477 | WP_001186726.1 | RadC family protein | - |
| FYA02_RS18575 () | 3729157..3729378 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| FYA02_RS18580 () | 3729541..3729915 | + | 375 | WP_052913677.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FYA02_RS18585 () | 3729962..3730339 | + | 378 | WP_001506713.1 | TA system toxin CbtA family protein | Toxin Detail |
| FYA02_RS18590 () | 3730336..3730824 | + | 489 | WP_001470575.1 | hypothetical protein | - |
| FYA02_RS18595 () | 3730836..3731033 | + | 198 | WP_000839249.1 | DUF957 domain-containing protein | - |
| FYA02_RS27100 () | 3731112..3731270 | + | 159 | WP_001467148.1 | hypothetical protein | - |
| FYA02_RS18620 () | 3732315..3732965 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| FYA02_RS18625 () | 3732973..3733953 | - | 981 | WP_001295601.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| FYA02_RS18630 () | 3734018..3735124 | - | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| FYA02_RS18635 () | 3735144..3735860 | - | 717 | WP_113495880.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FYA02_RS18640 () | 3737314..3737916 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| FYA02_RS18645 () | 3738393..3738989 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| FYA02_RS18650 () | 3739471..3740025 | + | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| FYA02_RS18655 () | 3740090..3740629 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| FYA02_RS18660 () | 3740666..3741391 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|