MGE detailed information
MGE type: Prophage MGE length: 54004 bp
Accession: NZ_CP043217 Location: 110029..164032 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: chromosome
Accession: NZ_CP043217 Location: 110029..164032 Organism: Escherichia coli O80:H26 strain EC-107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA02_RS00570 () | 105447..107078 | + | 1632 | WP_001297114.1 | oligopeptide ABC transporter substrate-binding protein OppA | - |
| FYA02_RS00575 () | 107164..108084 | + | 921 | WP_000911112.1 | oligopeptide ABC transporter permease OppB | - |
| FYA02_RS00580 () | 108099..109007 | + | 909 | WP_000979661.1 | oligopeptide ABC transporter permease OppC | - |
| FYA02_RS00585 () | 109019..110032 | + | 1014 | WP_000110945.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | - |
| FYA02_RS00590 () | 110029..111033 | + | 1005 | WP_000994905.1 | Oligopeptide transport ATP-binding protein OppF | VF |
| FYA02_RS00595 () | 111086..111415 | - | 330 | WP_000366959.1 | HI1450 family dsDNA-mimic protein | - |
| FYA02_RS00600 () | 111450..112910 | - | 1461 | WP_000214516.1 | cardiolipin synthase | - |
| FYA02_RS00605 () | 113053..113226 | + | 174 | WP_001309467.1 | YciY family protein | - |
| FYA02_RS00610 () | 113281..114534 | - | 1254 | WP_001295624.1 | voltage-gated potassium channel protein | - |
| FYA02_RS00615 () | 114767..115464 | - | 698 | Protein_112 | IS1 family transposase IS1A | Transposase |
| FYA02_RS00620 () | 115610..115906 | - | 297 | WP_000967595.1 | YciI family protein | - |
| FYA02_RS00625 () | 116130..116849 | + | 720 | WP_001360141.1 | Protein TonB | VF |
| FYA02_RS00630 () | 116889..117287 | - | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| FYA02_RS00635 () | 117392..117931 | - | 540 | WP_000808667.1 | septation protein A | - |
| FYA02_RS00640 () | 117961..118705 | - | 745 | Protein_117 | UPF0259 family protein | - |
| FYA02_RS00645 () | 118733..118822 | - | 90 | Protein_118 | YkgJ family cysteine cluster protein | - |
| FYA02_RS00650 () | 119062..119715 | + | 654 | WP_000737218.1 | outer membrane protein OmpW | - |
| FYA02_RS00655 () | 119761..120891 | - | 1131 | WP_001735157.1 | hypothetical protein ; Integrase | Integrase |
| FYA02_RS00660 () | 120869..121117 | - | 249 | WP_000113189.1 | excisionase | - |
| FYA02_RS00665 () | 121182..123653 | - | 2472 | WP_148879990.1 | exonuclease | - |
| FYA02_RS00670 () | 123734..123937 | - | 204 | WP_001090192.1 | DUF1482 family protein | - |
| FYA02_RS00675 () | 123940..124122 | - | 183 | WP_148879991.1 | cell division inhibition protein DicB | - |
| FYA02_RS00680 () | 124654..125028 | - | 375 | WP_000394557.1 | hypothetical protein | - |
| FYA02_RS00685 () | 125040..125192 | - | 153 | WP_000379580.1 | DUF1391 family protein | - |
| FYA02_RS00690 () | 125468..125755 | - | 288 | WP_089550521.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FYA02_RS00695 () | 125755..125946 | - | 192 | WP_024207685.1 | hypothetical protein | Antitoxin Detail |
| FYA02_RS00700 () | 125974..126375 | - | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| FYA02_RS00705 () | 126485..126757 | + | 273 | WP_024207686.1 | helix-turn-helix domain-containing protein | - |
| FYA02_RS00710 () | 126741..127262 | + | 522 | WP_089550520.1 | hypothetical protein | - |
| FYA02_RS00715 () | 127243..128208 | + | 966 | WP_059239307.1 | hypothetical protein | - |
| FYA02_RS00720 () | 128215..128961 | + | 747 | WP_000788766.1 | ATP-binding protein | - |
| FYA02_RS00725 () | 128984..129736 | + | 753 | WP_148879992.1 | DUF1627 domain-containing protein | - |
| FYA02_RS00730 () | 129723..130424 | + | 702 | WP_059239302.1 | ead/Ea22-like family protein | - |
| FYA02_RS00735 () | 130421..130711 | + | 291 | WP_069723346.1 | DUF4752 family protein | - |
| FYA02_RS00740 () | 130708..131391 | + | 684 | WP_059239299.1 | hypothetical protein | - |
| FYA02_RS00745 () | 131388..132158 | + | 771 | WP_075362635.1 | ead/Ea22-like family protein | - |
| FYA02_RS00750 () | 132160..132369 | + | 210 | WP_000951717.1 | hypothetical protein | - |
| FYA02_RS00755 () | 132366..133196 | + | 831 | WP_089519010.1 | DUF551 domain-containing protein | - |
| FYA02_RS00760 () | 133312..133416 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| FYA02_RS00765 () | 133606..133818 | + | 213 | WP_000128513.1 | type I toxin-antitoxin system Hok family toxin | - |
| FYA02_RS00775 () | 133986..134264 | + | 279 | WP_053883582.1 | hypothetical protein | - |
| FYA02_RS00780 () | 134266..135315 | + | 1050 | WP_148879993.1 | DUF968 domain-containing protein | - |
| FYA02_RS00785 () | 135328..135699 | + | 372 | WP_001217463.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FYA02_RS00790 () | 135689..136039 | + | 351 | WP_000532209.1 | antitermination protein Q | - |
| FYA02_RS00795 () | 136053..136439 | - | 387 | WP_000024152.1 | hypothetical protein | - |
| FYA02_RS00805 () | 136689..137567 | - | 879 | WP_000193722.1 | hypothetical protein | - |
| FYA02_RS00835 () | 138435..138650 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| FYA02_RS00840 () | 138655..138969 | + | 315 | WP_000193273.1 | YdfR family protein | - |
| FYA02_RS00845 () | 139025..139558 | + | 534 | WP_001274714.1 | lysozyme | - |
| FYA02_RS00850 () | 139775..139960 | + | 186 | WP_122986183.1 | Rz1 family lipoprotein | - |
| FYA02_RS26990 () | 140236..140445 | - | 210 | WP_187424740.1 | hypothetical protein | - |
| FYA02_RS00855 () | 140478..140954 | + | 477 | WP_000348565.1 | DUF1441 family protein | - |
| FYA02_RS00860 () | 140951..143074 | + | 2124 | WP_001077626.1 | phage terminase large subunit family protein | - |
| FYA02_RS00865 () | 143071..143283 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| FYA02_RS00870 () | 143283..144785 | + | 1503 | WP_000974564.1 | phage portal protein | - |
| FYA02_RS00875 () | 144730..146754 | + | 2025 | WP_001114424.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| FYA02_RS00880 () | 146842..147168 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| FYA02_RS00885 () | 147161..147442 | + | 282 | WP_001281348.1 | DNA breaking-rejoining protein | - |
| FYA02_RS00890 () | 147445..148068 | + | 624 | WP_000974958.1 | phage tail protein | - |
| FYA02_RS00895 () | 148081..148479 | + | 399 | WP_000682716.1 | tail protein | - |
| FYA02_RS00900 () | 148487..149239 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| FYA02_RS00905 () | 149253..149675 | + | 423 | WP_089550592.1 | phage minor tail protein G | - |
| FYA02_RS00910 () | 149702..150010 | + | 309 | WP_000532075.1 | phage tail assembly protein T | - |
| FYA02_RS00915 () | 150054..152699 | + | 2646 | WP_148879994.1 | phage tail tape measure protein | - |
| FYA02_RS00920 () | 152696..153025 | + | 330 | WP_000847336.1 | phage tail protein | - |
| FYA02_RS00925 () | 153025..153723 | + | 699 | WP_001152612.1 | phage minor tail protein L | - |
| FYA02_RS00930 () | 153729..154472 | + | 744 | WP_148879995.1 | C40 family peptidase | - |
| FYA02_RS00935 () | 154409..155011 | + | 603 | WP_148879996.1 | tail assembly protein | - |
| FYA02_RS00940 () | 155072..158551 | + | 3480 | WP_148879997.1 | host specificity protein J | - |
| FYA02_RS00945 () | 158619..159218 | + | 600 | WP_148879998.1 | Attachment invasion locus protein | VF |
| FYA02_RS00950 () | 159283..160596 | + | 1314 | WP_148879999.1 | ISNCY family transposase KIS | Transposase |
| FYA02_RS00955 () | 160598..160867 | + | 270 | WP_148880000.1 | phage tail fiber C-terminal domain-containing protein | - |
| FYA02_RS00960 () | 161077..161724 | + | 648 | WP_032350836.1 | hypothetical protein | VF |
| FYA02_RS26995 () | 162056..162226 | + | 171 | WP_000251936.1 | hypothetical protein | - |
| FYA02_RS00970 () | 162530..162655 | + | 126 | Protein_177 | outer membrane protein OmpW | - |
| FYA02_RS00975 () | 162715..163221 | - | 507 | WP_113456793.1 | ferritin-like domain-containing protein | - |
| FYA02_RS00980 () | 163267..163767 | - | 501 | WP_001056490.1 | ferritin-like domain-containing protein | - |
| FYA02_RS00985 () | 163853..164032 | - | 180 | WP_000807651.1 | general stress protein | - |
| FYA02_RS00990 () | 164413..165219 | - | 807 | WP_000443067.1 | tryptophan synthase subunit alpha | - |
| FYA02_RS00995 () | 165219..166412 | - | 1194 | WP_000209520.1 | tryptophan synthase subunit beta | - |
| FYA02_RS01000 () | 166424..167785 | - | 1362 | WP_072169209.1 | bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|