MGE detailed information
MGE type: Prophage MGE length: 38814 bp
Accession: NZ_CP043213 Location: 743840..782653 Organism: Escherichia coli O16:H48 strain CV601gfp Replicon: chromosome
Accession: NZ_CP043213 Location: 743840..782653 Organism: Escherichia coli O16:H48 strain CV601gfp Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA04_RS03480 () | 738974..739930 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| FYA04_RS03485 () | 739927..742125 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| FYA04_RS03490 () | 742135..743091 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| FYA04_RS03495 () | 743142..743480 | + | 339 | Protein_684 | LysR family transcriptional regulator | - |
| FYA04_RS03500 () | 743765..745165 | + | 1401 | WP_001407714.1 | hypothetical protein ; Integrase | Integrase |
| FYA04_RS03505 () | 745282..745722 | + | 441 | WP_000224818.1 | hypothetical protein | - |
| FYA04_RS03510 () | 745719..745943 | + | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| FYA04_RS03515 () | 746062..746916 | + | 855 | WP_000072039.1 | hypothetical protein | - |
| FYA04_RS03520 () | 746943..747641 | + | 699 | WP_001214248.1 | recombinase family protein | - |
| FYA04_RS03525 () | 747913..748539 | + | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| FYA04_RS03530 () | 748630..749460 | - | 831 | Protein_691 | type III restriction endonuclease subunit R | - |
| FYA04_RS03535 () | 749515..750212 | + | 698 | Protein_692 | IS1 family transposase IS1R | Transposase |
| FYA04_RS03540 () | 750229..750432 | - | 204 | Protein_693 | DUF3987 domain-containing protein | - |
| FYA04_RS23040 () | 750491..750586 | + | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| FYA04_RS03545 () | 750556..751560 | + | 1005 | WP_001281825.1 | hypothetical protein | VF |
| FYA04_RS03550 () | 751699..752457 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| FYA04_RS03555 () | 752462..754072 | - | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| FYA04_RS03560 () | 754084..755466 | - | 1383 | WP_000192863.1 | MFS transporter | - |
| FYA04_RS03565 () | 755693..757660 | - | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| FYA04_RS03570 () | 757675..758583 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| FYA04_RS03575 () | 758878..760032 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| FYA04_RS03580 () | 760126..760476 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| FYA04_RS03585 () | 760499..760747 | + | 249 | Protein_703 | IS3 family transposase ISEhe3 | Transposase |
| FYA04_RS03590 () | 760757..760930 | - | 174 | Protein_704 | IS30 family transposase | - |
| FYA04_RS03595 () | 760986..761683 | + | 698 | Protein_705 | IS1 family transposase IS1R | Transposase |
| FYA04_RS03600 () | 761700..762047 | + | 348 | Protein_706 | ABC transporter permease subunit | - |
| FYA04_RS03605 () | 762059..763105 | + | 1047 | WP_000192349.1 | hypothetical protein | VF |
| FYA04_RS03610 () | 763214..764146 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| FYA04_RS03615 () | 764133..765536 | - | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| FYA04_RS03620 () | 765780..766760 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| FYA04_RS03625 () | 766908..767999 | - | 1092 | Protein_711 | group II intron reverse transcriptase/maturase | - |
| FYA04_RS03635 () | 768672..769097 | - | 426 | Protein_712 | IS3 family transposase | - |
| FYA04_RS03640 () | 769107..770258 | - | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| FYA04_RS03650 () | 770326..770583 | - | 258 | Protein_714 | IS3 family transposase ISEc52 | Transposase |
| FYA04_RS03655 () | 770679..771572 | + | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| FYA04_RS03660 () | 771901..772764 | + | 864 | WP_001065553.1 | GTPase family protein | - |
| FYA04_RS03665 () | 772856..773677 | + | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| FYA04_RS03670 () | 773894..774085 | + | 192 | Protein_718 | DeoR family transcriptional regulator | - |
| FYA04_RS03675 () | 774081..774308 | + | 228 | WP_001548158.1 | hypothetical protein | - |
| FYA04_RS03680 () | 774308..774751 | + | 444 | WP_000824223.1 | hypothetical protein | - |
| FYA04_RS03685 () | 774774..775241 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| FYA04_RS03690 () | 775318..775557 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| FYA04_RS03695 () | 775655..776113 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| FYA04_RS03700 () | 776129..776605 | + | 477 | WP_000811693.1 | RadC family protein | - |
| FYA04_RS03705 () | 776614..776835 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| FYA04_RS03710 () | 776854..777171 | + | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| FYA04_RS03715 () | 777192..777533 | + | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| FYA04_RS03725 () | 778105..779358 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FYA04_RS03730 () | 779370..780473 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| FYA04_RS03735 () | 780761..781816 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| FYA04_RS22925 () | 781855..781947 | - | 93 | Protein_731 | sigma factor-binding protein Crl | - |
| FYA04_RS03740 () | 781956..782653 | - | 698 | Protein_732 | IS1 family transposase IS1A | Transposase |
| FYA04_RS03745 () | 782710..783684 | - | 975 | Protein_733 | lactose permease | - |
| FYA04_RS03750 () | 783736..786810 | - | 3075 | WP_000177906.1 | beta-galactosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|