MGE detailed information
MGE type: Prophage MGE length: 52854 bp
Accession: NZ_CP043213 Location: 1851340..1904193 Organism: Escherichia coli O16:H48 strain CV601gfp Replicon: chromosome
Accession: NZ_CP043213 Location: 1851340..1904193 Organism: Escherichia coli O16:H48 strain CV601gfp Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA04_RS09120 () | 1846553..1847341 | + | 789 | WP_000690229.1 | sugar phosphate isomerase/epimerase | - |
| FYA04_RS09125 () | 1847351..1848406 | + | 1056 | WP_001395397.1 | Gfo/Idh/MocA family oxidoreductase | - |
| FYA04_RS09130 () | 1848403..1850670 | + | 2268 | WP_000198036.1 | kojibiose phosphorylase | - |
| FYA04_RS09135 () | 1850667..1851326 | + | 660 | WP_000775794.1 | beta-phosphoglucomutase | - |
| FYA04_RS09140 () | 1851340..1852421 | + | 1082 | Protein_1780 | hypothetical protein | VF |
| FYA04_RS09145 () | 1852466..1853371 | + | 906 | WP_000735257.1 | monomeric porin OmpG | - |
| FYA04_RS09150 () | 1853482..1854480 | - | 999 | WP_000075375.1 | LacI family transcriptional regulator | - |
| FYA04_RS09155 () | 1854636..1856033 | + | 1398 | WP_000825775.1 | YcjX family protein | - |
| FYA04_RS09160 () | 1856030..1857091 | + | 1062 | WP_000138728.1 | YcjF family protein | - |
| FYA04_RS09165 () | 1857239..1858780 | + | 1542 | WP_001300658.1 | hypothetical protein | VF |
| FYA04_RS09170 () | 1858824..1859330 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| FYA04_RS09175 () | 1859449..1860414 | + | 966 | WP_001261211.1 | L-Ala-D/L-Glu epimerase | - |
| FYA04_RS09180 () | 1860389..1861117 | - | 729 | WP_000219122.1 | murein tripeptide amidase MpaA | - |
| FYA04_RS09185 () | 1861244..1861381 | - | 138 | Protein_1789 | NAD-dependent dehydratase | - |
| FYA04_RS09195 () | 1861452..1862372 | - | 921 | WP_001300523.1 | alpha/beta hydrolase | - |
| FYA04_RS09200 () | 1862510..1863409 | + | 900 | WP_000817708.1 | hypothetical protein | VF |
| FYA04_RS09205 () | 1863746..1865359 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| FYA04_RS09210 () | 1865410..1866441 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| FYA04_RS09215 () | 1866631..1867611 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| FYA04_RS09220 () | 1867884..1868141 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| FYA04_RS09225 () | 1868191..1869141 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| FYA04_RS09230 () | 1869293..1870045 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| FYA04_RS09235 () | 1870240..1870755 | - | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| FYA04_RS09240 () | 1870766..1872292 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| FYA04_RS09245 () | 1872329..1873774 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| FYA04_RS09250 () | 1873774..1875084 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| FYA04_RS09255 () | 1875260..1876168 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| FYA04_RS09260 () | 1876498..1877061 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| FYA04_RS09265 () | 1877082..1878314 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| FYA04_RS23070 () | 1878508..1878555 | + | 48 | WP_211180494.1 | protein YnaN | - |
| FYA04_RS09270 () | 1878569..1879552 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| FYA04_RS09275 () | 1880030..1881403 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| FYA04_RS09280 () | 1881532..1882467 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| FYA04_RS09285 () | 1882519..1883754 | - | 1236 | WP_000040852.1 | hypothetical protein ; Integrase | Integrase |
| FYA04_RS09290 () | 1883756..1883971 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| FYA04_RS09295 () | 1884050..1884259 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1884075..1884253 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1884075..1884253 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1884075..1884253 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1884075..1884253 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| FYA04_RS09300 () | 1884252..1884446 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| FYA04_RS09305 () | 1884503..1885312 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| FYA04_RS09310 () | 1885305..1887905 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| FYA04_RS09315 () | 1888007..1888282 | - | 276 | WP_000632297.1 | protein RacC | - |
| FYA04_RS09320 () | 1888357..1888527 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| FYA04_RS09325 () | 1888527..1888748 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| FYA04_RS09330 () | 1889190..1889678 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| FYA04_RS09335 () | 1889675..1889830 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| FYA04_RS09345 () | 1890284..1890760 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| FYA04_RS09350 () | 1890884..1891180 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| FYA04_RS09355 () | 1891203..1891625 | + | 423 | WP_000693797.1 | phage protein | - |
| FYA04_RS09360 () | 1891638..1892495 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| FYA04_RS09365 () | 1892502..1893248 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| FYA04_RS09370 () | 1893271..1893723 | + | 453 | Protein_1825 | DUF1627 domain-containing protein | - |
| FYA04_RS09375 () | 1893919..1894104 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| FYA04_RS09380 () | 1894301..1895758 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| FYA04_RS09385 () | 1895896..1896159 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| FYA04_RS09390 () | 1896140..1896499 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| FYA04_RS09400 () | 1896973..1897905 | + | 933 | Protein_1830 | phage tail length tape measure family protein | - |
| FYA04_RS09405 () | 1897908..1898123 | + | 216 | Protein_1831 | Ail/Lom family outer membrane beta-barrel protein | - |
| FYA04_RS09410 () | 1898265..1899245 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| FYA04_RS09415 () | 1899315..1899503 | + | 189 | Protein_1833 | Ail/Lom family outer membrane beta-barrel protein | - |
| FYA04_RS09420 () | 1899568..1902930 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FYA04_RS09425 () | 1902930..1903505 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| FYA04_RS09430 () | 1903603..1904193 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FYA04_RS09435 () | 1904510..1904743 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| FYA04_RS09440 () | 1904812..1904925 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| FYA04_RS09445 () | 1905704..1906138 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| FYA04_RS09450 () | 1906279..1907412 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|