MGE detailed information
MGE type: Prophage MGE length: 38814 bp
Accession: NZ_CP043199 Location: 1305225..1344038 Organism: Escherichia coli O16:H48 strain PG20180060 Replicon: chromosome
Accession: NZ_CP043199 Location: 1305225..1344038 Organism: Escherichia coli O16:H48 strain PG20180060 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA11_RS06090 () | 1300359..1301315 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| FYA11_RS06095 () | 1301312..1303510 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| FYA11_RS06100 () | 1303520..1304476 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| FYA11_RS06105 () | 1304527..1304865 | + | 339 | Protein_1176 | LysR family transcriptional regulator | - |
| FYA11_RS06110 () | 1305150..1306550 | + | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FYA11_RS06115 () | 1306667..1307107 | + | 441 | WP_000224818.1 | hypothetical protein | - |
| FYA11_RS06120 () | 1307104..1307328 | + | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| FYA11_RS06125 () | 1307447..1308301 | + | 855 | WP_000072039.1 | hypothetical protein | - |
| FYA11_RS06130 () | 1308328..1309026 | + | 699 | WP_001214248.1 | recombinase family protein | - |
| FYA11_RS06135 () | 1309298..1309924 | + | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| FYA11_RS06140 () | 1310015..1310845 | - | 831 | Protein_1183 | type III restriction endonuclease subunit R | - |
| FYA11_RS06145 () | 1310900..1311597 | + | 698 | Protein_1184 | IS1 family transposase IS1R | Transposase |
| FYA11_RS06150 () | 1311614..1311817 | - | 204 | Protein_1185 | DUF3987 domain-containing protein | - |
| FYA11_RS23440 () | 1311876..1311971 | + | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| FYA11_RS06155 () | 1311941..1312945 | + | 1005 | WP_001281825.1 | Ornithine carbamoyltransferase subunit F | VF |
| FYA11_RS06160 () | 1313084..1313842 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| FYA11_RS06165 () | 1313847..1315457 | - | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| FYA11_RS06170 () | 1315469..1316851 | - | 1383 | WP_000192863.1 | MFS transporter | - |
| FYA11_RS06175 () | 1317078..1319045 | - | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| FYA11_RS06180 () | 1319060..1319968 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| FYA11_RS06185 () | 1320263..1321417 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| FYA11_RS06190 () | 1321511..1321861 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| FYA11_RS06195 () | 1321884..1322132 | + | 249 | Protein_1195 | IS3 family transposase ISEhe3 | Transposase |
| FYA11_RS06200 () | 1322142..1322315 | - | 174 | Protein_1196 | IS30 family transposase | - |
| FYA11_RS06205 () | 1322371..1323068 | + | 698 | Protein_1197 | IS1 family transposase IS1R | Transposase |
| FYA11_RS06210 () | 1323085..1323432 | + | 348 | Protein_1198 | ABC transporter permease subunit | - |
| FYA11_RS06215 () | 1323444..1324490 | + | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| FYA11_RS06220 () | 1324599..1325531 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| FYA11_RS06225 () | 1325518..1326921 | - | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| FYA11_RS06230 () | 1327165..1328145 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| FYA11_RS06235 () | 1328293..1329384 | - | 1092 | Protein_1203 | group II intron reverse transcriptase/maturase | - |
| FYA11_RS06245 () | 1330057..1330482 | - | 426 | Protein_1204 | IS3 family transposase | - |
| FYA11_RS06250 () | 1330492..1331643 | - | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| FYA11_RS06260 () | 1331711..1331968 | - | 258 | Protein_1206 | IS3 family transposase ISEc52 | Transposase |
| FYA11_RS06265 () | 1332064..1332957 | + | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| FYA11_RS06270 () | 1333286..1334149 | + | 864 | WP_001065553.1 | GTPase family protein | - |
| FYA11_RS06275 () | 1334241..1335062 | + | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| FYA11_RS06280 () | 1335279..1335470 | + | 192 | Protein_1210 | DeoR family transcriptional regulator | - |
| FYA11_RS06285 () | 1335466..1335693 | + | 228 | WP_001548158.1 | hypothetical protein | - |
| FYA11_RS06290 () | 1335693..1336136 | + | 444 | WP_000824223.1 | hypothetical protein | - |
| FYA11_RS06295 () | 1336159..1336626 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| FYA11_RS06300 () | 1336703..1336942 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| FYA11_RS06305 () | 1337040..1337498 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| FYA11_RS06310 () | 1337514..1337990 | + | 477 | WP_000811693.1 | RadC family protein | - |
| FYA11_RS06315 () | 1337999..1338220 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| FYA11_RS06320 () | 1338239..1338556 | + | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| FYA11_RS06325 () | 1338577..1338918 | + | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| FYA11_RS06335 () | 1339490..1340743 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FYA11_RS06340 () | 1340755..1341858 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| FYA11_RS06345 () | 1342146..1343201 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| FYA11_RS23280 () | 1343240..1343332 | - | 93 | Protein_1223 | sigma factor-binding protein Crl | - |
| FYA11_RS06350 () | 1343341..1344038 | - | 698 | Protein_1224 | IS1 family transposase IS1A | Transposase |
| FYA11_RS06355 () | 1344095..1345069 | - | 975 | Protein_1225 | lactose permease | - |
| FYA11_RS06360 () | 1345121..1348195 | - | 3075 | WP_000177906.1 | beta-galactosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|