MGE detailed information
MGE type: Prophage MGE length: 38814 bp
Accession: NZ_CP043197 Location: 896877..935690 Organism: Escherichia coli O16:H48 strain PG20180061 Replicon: chromosome
Accession: NZ_CP043197 Location: 896877..935690 Organism: Escherichia coli O16:H48 strain PG20180061 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA12_RS04480 () | 892720..895794 | + | 3075 | WP_000177906.1 | beta-galactosidase | - |
| FYA12_RS04485 () | 895846..896820 | + | 975 | Protein_868 | lactose permease | - |
| FYA12_RS04490 () | 896877..897574 | + | 698 | Protein_869 | IS1 family transposase IS1A | Transposase |
| FYA12_RS22820 () | 897583..897675 | + | 93 | Protein_870 | sigma factor-binding protein Crl | - |
| FYA12_RS04495 () | 897714..898769 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| FYA12_RS04500 () | 899057..900160 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| FYA12_RS04505 () | 900172..901425 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FYA12_RS04515 () | 901997..902338 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| FYA12_RS04520 () | 902359..902676 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| FYA12_RS04525 () | 902695..902916 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| FYA12_RS04530 () | 902925..903401 | - | 477 | WP_000811693.1 | RadC family protein | - |
| FYA12_RS04535 () | 903417..903875 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| FYA12_RS04540 () | 903973..904212 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| FYA12_RS04545 () | 904289..904756 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| FYA12_RS04550 () | 904779..905222 | - | 444 | WP_000824223.1 | hypothetical protein | - |
| FYA12_RS04555 () | 905222..905449 | - | 228 | WP_001548158.1 | hypothetical protein | - |
| FYA12_RS04560 () | 905445..905636 | - | 192 | Protein_883 | DeoR family transcriptional regulator | - |
| FYA12_RS04565 () | 905853..906674 | - | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| FYA12_RS04570 () | 906766..907629 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| FYA12_RS04575 () | 907958..908851 | - | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| FYA12_RS04580 () | 908947..909204 | + | 258 | Protein_887 | IS3 family transposase ISEc52 | Transposase |
| FYA12_RS04590 () | 909272..910423 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| FYA12_RS04595 () | 910433..910858 | + | 426 | Protein_889 | IS3 family transposase | - |
| FYA12_RS04605 () | 911531..912622 | + | 1092 | Protein_890 | group II intron reverse transcriptase/maturase | - |
| FYA12_RS04610 () | 912770..913750 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| FYA12_RS04615 () | 913994..915397 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| FYA12_RS04620 () | 915384..916316 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| FYA12_RS04625 () | 916425..917471 | - | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| FYA12_RS04630 () | 917483..917830 | - | 348 | Protein_895 | ABC transporter permease subunit | - |
| FYA12_RS04635 () | 917847..918544 | - | 698 | Protein_896 | IS1 family transposase IS1R | Transposase |
| FYA12_RS04640 () | 918600..918773 | + | 174 | Protein_897 | IS30 family transposase | - |
| FYA12_RS04645 () | 918783..919031 | - | 249 | Protein_898 | IS3 family transposase ISEhe3 | Transposase |
| FYA12_RS04650 () | 919054..919404 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| FYA12_RS04655 () | 919498..920652 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| FYA12_RS04660 () | 920947..921855 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| FYA12_RS04665 () | 921870..923837 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| FYA12_RS04670 () | 924064..925446 | + | 1383 | WP_000192863.1 | MFS transporter | - |
| FYA12_RS04675 () | 925458..927068 | + | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| FYA12_RS04680 () | 927073..927831 | - | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| FYA12_RS04685 () | 927970..928974 | - | 1005 | WP_001281825.1 | Ornithine carbamoyltransferase subunit F | VF |
| FYA12_RS22940 () | 928944..929039 | - | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| FYA12_RS04690 () | 929098..929301 | + | 204 | Protein_908 | DUF3987 domain-containing protein | - |
| FYA12_RS04695 () | 929318..930015 | - | 698 | Protein_909 | IS1 family transposase IS1R | Transposase |
| FYA12_RS04700 () | 930070..930900 | + | 831 | Protein_910 | type III restriction endonuclease subunit R | - |
| FYA12_RS04705 () | 930991..931617 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| FYA12_RS04710 () | 931889..932587 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| FYA12_RS04715 () | 932614..933468 | - | 855 | WP_000072039.1 | hypothetical protein | - |
| FYA12_RS04720 () | 933587..933811 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| FYA12_RS04725 () | 933808..934248 | - | 441 | WP_000224818.1 | hypothetical protein | - |
| FYA12_RS04730 () | 934365..935765 | - | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FYA12_RS04735 () | 936050..936388 | - | 339 | Protein_917 | LysR family transcriptional regulator | - |
| FYA12_RS04740 () | 936439..937395 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| FYA12_RS04745 () | 937405..939603 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| FYA12_RS04750 () | 939600..940556 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|