MGE detailed information
MGE type: Genomic_island MGE length: 52716 bp
Accession: NZ_CP043185 Location: 3610309..3663024 Organism: Escherichia coli O16:H48 strain PG20180171 Replicon: chromosome
Accession: NZ_CP043185 Location: 3610309..3663024 Organism: Escherichia coli O16:H48 strain PG20180171 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA18_RS17310 () | 3605571..3606929 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| FYA18_RS17315 () | 3607001..3607756 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| FYA18_RS17320 () | 3607790..3608512 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| FYA18_RS17325 () | 3608509..3608976 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| FYA18_RS17330 () | 3609041..3609772 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| FYA18_RS17340 () | 3610309..3611094 | + | 786 | WP_001086141.1 | lipoprotein | - |
| FYA18_RS17345 () | 3611231..3611710 | - | 480 | WP_001236645.1 | hypothetical protein | - |
| FYA18_RS17350 () | 3611720..3612076 | - | 357 | Protein_3370 | hypothetical protein | - |
| FYA18_RS17355 () | 3612074..3612352 | + | 279 | Protein_3371 | ISAs1 family transposase | - |
| FYA18_RS17360 () | 3612393..3613163 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| FYA18_RS17365 () | 3613344..3613790 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| FYA18_RS17370 () | 3613833..3616277 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| FYA18_RS17375 () | 3616517..3617095 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| FYA18_RS17380 () | 3617301..3618068 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FYA18_RS17385 () | 3618039..3618779 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| FYA18_RS17390 () | 3618935..3619213 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| FYA18_RS17395 () | 3619216..3619476 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| FYA18_RS17400 () | 3619686..3620435 | + | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| FYA18_RS17405 () | 3620611..3621108 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| FYA18_RS17410 () | 3621332..3623044 | - | 1713 | Protein_3382 | Flagellar biosynthesis protein FlhA | VF |
| FYA18_RS17415 () | 3623016..3623801 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| FYA18_RS17420 () | 3623872..3624927 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| FYA18_RS17425 () | 3624979..3625272 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| FYA18_RS17430 () | 3625275..3625673 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| FYA18_RS17435 () | 3625683..3626135 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| FYA18_RS17440 () | 3626453..3626659 | + | 207 | Protein_3388 | RtcB family protein | - |
| FYA18_RS17445 () | 3626655..3627176 | + | 522 | Protein_3389 | peptide chain release factor H | - |
| FYA18_RS17450 () | 3627233..3628690 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| FYA18_RS17455 () | 3628951..3629409 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| FYA18_RS17460 () | 3629501..3630745 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3630005..3630085 | + | 81 | NuclAT_12 | - | - |
| - () | 3630005..3630085 | + | 81 | NuclAT_12 | - | - |
| - () | 3630005..3630085 | + | 81 | NuclAT_12 | - | - |
| - () | 3630005..3630085 | + | 81 | NuclAT_12 | - | - |
| FYA18_RS17465 () | 3630803..3631132 | + | 330 | WP_072647358.1 | sigma factor-binding protein Crl | - |
| FYA18_RS17470 () | 3631183..3631880 | + | 698 | Protein_3394 | IS1 family transposase IS1A | Transposase |
| FYA18_RS17475 () | 3631836..3633008 | - | 1173 | Protein_3395 | iron-sulfur cluster-binding protein | - |
| FYA18_RS17480 () | 3633019..3633738 | - | 720 | WP_001102108.1 | (Fe-S)-binding protein | - |
| FYA18_RS17485 () | 3634265..3635119 | - | 855 | WP_000339594.1 | DNA-binding transcriptional regulator RclR | - |
| FYA18_RS17490 () | 3635345..3636670 | + | 1326 | WP_001046307.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| FYA18_RS17495 () | 3636779..3637015 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| FYA18_RS17500 () | 3637027..3637620 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| FYA18_RS17505 () | 3637779..3637907 | - | 129 | Protein_3401 | aldo/keto reductase | - |
| FYA18_RS17510 () | 3638210..3638863 | + | 654 | Protein_3402 | Right origin-binding protein | VF |
| FYA18_RS17520 () | 3640114..3640989 | - | 876 | Protein_3404 | Invasin | VF |
| FYA18_RS17530 () | 3642104..3642205 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| FYA18_RS17535 () | 3642569..3642832 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| FYA18_RS17540 () | 3642832..3642972 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| FYA18_RS17545 () | 3643007..3643234 | - | 228 | WP_001147279.1 | hypothetical protein | - |
| FYA18_RS17550 () | 3644058..3644600 | + | 543 | WP_001301257.1 | HTH-type transcriptional regulator EcpR | VF |
| FYA18_RS17555 () | 3644675..3645262 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| FYA18_RS17560 () | 3645320..3645988 | + | 669 | WP_000716398.1 | putative fimbrial chaperone EcpB | VF |
| FYA18_RS17565 () | 3646014..3648539 | + | 2526 | WP_001131096.1 | putative outer membrane usher protein EcpC | VF |
| FYA18_RS17570 () | 3648529..3650172 | + | 1644 | WP_001310578.1 | Fimbria adhesin EcpD | VF |
| FYA18_RS17575 () | 3650141..3650851 | + | 711 | WP_001350485.1 | putative fimbrial chaperone EcpE | VF |
| FYA18_RS17580 () | 3651164..3651493 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| FYA18_RS17585 () | 3651741..3652355 | - | 615 | WP_001019920.1 | YagU family protein | - |
| FYA18_RS17590 () | 3652773..3653462 | + | 690 | WP_000070700.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| FYA18_RS17595 () | 3653459..3654415 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| FYA18_RS17600 () | 3654412..3656610 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| FYA18_RS17605 () | 3656620..3657576 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| FYA18_RS17610 () | 3657627..3657965 | + | 339 | Protein_3421 | LysR family transcriptional regulator | - |
| FYA18_RS17615 () | 3658250..3659650 | + | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FYA18_RS17620 () | 3659767..3660207 | + | 441 | WP_000224818.1 | hypothetical protein | - |
| FYA18_RS17625 () | 3660204..3660428 | + | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| FYA18_RS17630 () | 3660547..3661401 | + | 855 | WP_000072039.1 | hypothetical protein | - |
| FYA18_RS17635 () | 3661428..3662126 | + | 699 | WP_001214248.1 | recombinase family protein | - |
| FYA18_RS17640 () | 3662398..3663024 | + | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| FYA18_RS17645 () | 3663115..3663945 | - | 831 | Protein_3428 | type III restriction endonuclease subunit R | - |
| FYA18_RS17650 () | 3664000..3664697 | + | 698 | Protein_3429 | IS1 family transposase | - |
| FYA18_RS17655 () | 3664714..3664917 | - | 204 | Protein_3430 | DUF3987 domain-containing protein | - |
| FYA18_RS22845 () | 3664976..3665071 | + | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| FYA18_RS17660 () | 3665041..3666045 | + | 1005 | WP_001281825.1 | ornithine carbamoyltransferase | - |
| FYA18_RS17665 () | 3666184..3666942 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|