MGE detailed information
MGE type: Genomic_island MGE length: 23084 bp
Accession: NZ_CP043181 Location: 3657432..3680515 Organism: Escherichia coli O2:H6 strain PG20180057 Replicon: chromosome
Accession: NZ_CP043181 Location: 3657432..3680515 Organism: Escherichia coli O2:H6 strain PG20180057 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA20_RS17625 () | 3653547..3653972 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| FYA20_RS17630 () | 3653977..3655461 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| FYA20_RS17635 () | 3655484..3655987 | - | 504 | WP_000041477.1 | type VI secretion system contractile sheath small subunit | - |
| FYA20_RS17640 () | 3656693..3657211 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| FYA20_RS17645 () | 3657432..3659663 | + | 2232 | WP_000053619.1 | type VI secretion system tip protein VgrG | - |
| FYA20_RS17650 () | 3659676..3660440 | + | 765 | WP_000633876.1 | DUF4123 domain-containing protein | - |
| FYA20_RS17655 () | 3660784..3661307 | + | 524 | Protein_3382 | DUF3304 domain-containing protein | - |
| FYA20_RS17660 () | 3661322..3661846 | + | 525 | WP_032144418.1 | DUF3304 domain-containing protein | - |
| FYA20_RS17665 () | 3661831..3662373 | + | 543 | WP_001518352.1 | DUF3304 domain-containing protein | - |
| FYA20_RS17670 () | 3662358..3664451 | + | 2094 | WP_000095581.1 | DUF2235 domain-containing protein | - |
| FYA20_RS17675 () | 3664727..3665491 | + | 765 | Protein_3386 | ISAs1 family transposase | - |
| FYA20_RS17680 () | 3665720..3666223 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| FYA20_RS17685 () | 3666317..3666805 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| FYA20_RS17690 () | 3666831..3667025 | + | 195 | Protein_3389 | ISAs1 family transposase | - |
| FYA20_RS17695 () | 3667076..3667846 | - | 771 | WP_001118054.1 | 2-oxoglutaramate amidase | - |
| FYA20_RS17700 () | 3668027..3668473 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| FYA20_RS17705 () | 3668516..3670960 | - | 2445 | WP_000973130.1 | acyl-CoA dehydrogenase FadE | - |
| FYA20_RS17710 () | 3671200..3671778 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| FYA20_RS17715 () | 3671983..3672750 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FYA20_RS17720 () | 3672721..3673461 | - | 741 | WP_148885974.1 | murein L,D-transpeptidase | - |
| FYA20_RS17725 () | 3673773..3674522 | + | 750 | WP_000093934.1 | C40 family peptidase | - |
| FYA20_RS17730 () | 3674698..3675195 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| FYA20_RS17735 () | 3675190..3675684 | - | 495 | WP_139174989.1 | hypothetical protein | - |
| FYA20_RS17740 () | 3675712..3677424 | - | 1713 | Protein_3399 | flagellar biosynthesis protein FlhA | - |
| FYA20_RS17745 () | 3677396..3678181 | + | 786 | WP_187424783.1 | putative lateral flagellar export/assembly protein LafU | - |
| FYA20_RS17750 () | 3678252..3679307 | + | 1056 | WP_001226170.1 | DNA polymerase IV | - |
| FYA20_RS17755 () | 3679359..3679652 | + | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| FYA20_RS17760 () | 3679655..3680053 | + | 399 | WP_001263501.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| FYA20_RS17765 () | 3680063..3680515 | + | 453 | WP_001059897.1 | GNAT family N-acetyltransferase | - |
| FYA20_RS17770 () | 3680705..3681844 | + | 1140 | WP_000521578.1 | RNA ligase RtcB family protein | - |
| FYA20_RS17775 () | 3681841..3682455 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| FYA20_RS17780 () | 3682512..3683969 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| FYA20_RS17785 () | 3684230..3684688 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - () | 3685284..3685364 | + | 81 | NuclAT_4 | - | - |
| - () | 3685284..3685364 | + | 81 | NuclAT_4 | - | - |
| - () | 3685284..3685364 | + | 81 | NuclAT_4 | - | - |
| - () | 3685284..3685364 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|