MGE detailed information
MGE type: Prophage MGE length: 27063 bp
Accession: NZ_CP042980 Location: 1537331..1564393 Organism: Shigella flexneri Y strain PE577 Replicon: chromosome
Accession: NZ_CP042980 Location: 1537331..1564393 Organism: Shigella flexneri Y strain PE577 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FW259_RS07985 () | 1533993..1535639 | - | 1647 | WP_005050037.1 | medium-chain fatty-acid--CoA ligase | - |
| FW259_RS07990 () | 1535696..1535989 | - | 294 | WP_000081083.1 | ferredoxin family protein | - |
| FW259_RS07995 () | 1535986..1537275 | - | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| FW259_RS08000 () | 1537331..1538269 | - | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| FW259_RS08005 () | 1538289..1539053 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| FW259_RS08010 () | 1539373..1539873 | + | 501 | WP_000284805.1 | cupin domain-containing protein | - |
| FW259_RS08015 () | 1539907..1540604 | + | 698 | Protein_1532 | IS1 family transposase IS1X2 | Transposase |
| FW259_RS08020 () | 1540598..1540765 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| FW259_RS08025 () | 1541167..1541928 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| FW259_RS08030 () | 1541996..1542199 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| FW259_RS08035 () | 1542447..1544726 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| FW259_RS08040 () | 1545060..1545809 | - | 750 | Protein_1537 | Type 1 fimbrin D-mannose specific adhesin | VF |
| FW259_RS08045 () | 1545865..1546562 | + | 698 | Protein_1538 | IS1 family transposase IS1X2 | Transposase |
| FW259_RS08050 () | 1546580..1547458 | + | 879 | Protein_1539 | IS3 family transposase IS600 | Transposase |
| FW259_RS08055 () | 1547455..1547760 | - | 306 | WP_094108346.1 | hypothetical protein | - |
| FW259_RS08060 () | 1547785..1548024 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FW259_RS08065 () | 1548024..1548311 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FW259_RS08070 () | 1548383..1548538 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FW259_RS08075 () | 1548756..1549007 | + | 252 | WP_000980987.1 | hypothetical protein | - |
| FW259_RS08080 () | 1549074..1549352 | + | 279 | Protein_1545 | hypothetical protein | - |
| FW259_RS08085 () | 1549354..1550403 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| FW259_RS08090 () | 1550416..1550772 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FW259_RS08095 () | 1550787..1551608 | + | 822 | WP_000762882.1 | antitermination protein | - |
| FW259_RS08115 () | 1552495..1552626 | + | 132 | Protein_1549 | DUF3927 family protein | - |
| FW259_RS08120 () | 1552907..1553242 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| FW259_RS08125 () | 1553502..1553690 | + | 189 | WP_000874243.1 | DUF1737 domain-containing protein | - |
| FW259_RS23545 () | 1553687..1553848 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| FW259_RS08130 () | 1553998..1554177 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| FW259_RS08140 () | 1555420..1556439 | + | 1020 | Protein_1555 | MFS transporter | - |
| FW259_RS08145 () | 1556528..1557988 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| FW259_RS08150 () | 1558024..1558227 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FW259_RS08155 () | 1558405..1559091 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FW259_RS08160 () | 1559180..1559926 | - | 747 | WP_005050098.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| FW259_RS08165 () | 1560063..1562108 | + | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| FW259_RS08170 () | 1562153..1562671 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| FW259_RS08175 () | 1562947..1563171 | + | 225 | Protein_1562 | YdeI family stress tolerance OB fold protein | - |
| FW259_RS08180 () | 1563237..1564393 | + | 1157 | WP_094108358.1 | IS3 family transposase IS600 | Transposase |
| FW259_RS08185 () | 1564641..1564736 | - | 96 | WP_000901367.1 | protein MgtS | - |
| FW259_RS08190 () | 1564863..1565981 | - | 1119 | WP_000212732.1 | efflux MFS transporter YdeE | - |
| FW259_RS08195 () | 1566245..1567144 | + | 900 | WP_000087224.1 | O-acetylserine/cysteine exporter | - |
| FW259_RS08200 () | 1567175..1567393 | - | 219 | WP_000803661.1 | multiple antibiotic resistance protein MarB | - |
| FW259_RS08205 () | 1567425..1567808 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| FW259_RS08210 () | 1567828..1568262 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| FW259_RS08215 () | 1568474..1569139 | + | 666 | WP_000885035.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|