MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 117296 bp
Accession: NZ_CP042974 Location: 1..117296 Organism: Escherichia coli strain CFSAN061768 Replicon: plasmid pCFSAN061768
Accession: NZ_CP042974 Location: 1..117296 Organism: Escherichia coli strain CFSAN061768 Replicon: plasmid pCFSAN061768
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA694_RS23575 (CA694_023880) | 1924..2223 | - | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| CA694_RS23580 (CA694_023885) | 2234..2896 | - | 663 | WP_000958205.1 | lytic transglycosylase domain-containing protein | - |
| CA694_RS23585 (CA694_023890) | 2899..3114 | - | 216 | WP_001112907.1 | hypothetical protein | - |
| CA694_RS23590 (CA694_023895) | 3107..3415 | - | 309 | WP_000062770.1 | hypothetical protein | - |
| CA694_RS23595 (CA694_023900) | 3738..4643 | + | 906 | WP_011264037.1 | helix-turn-helix domain-containing protein | - |
| CA694_RS23600 (CA694_023905) | 4647..5630 | + | 984 | WP_032201035.1 | hypothetical protein | - |
| CA694_RS23605 (CA694_023910) | 5623..6111 | + | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| CA694_RS23610 (CA694_023915) | 6108..7826 | + | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| CA694_RS23615 (CA694_023925) | 8685..9042 | - | 358 | Protein_9 | IS1 family transposase | - |
| CA694_RS23620 (CA694_023930) | 9234..10211 | + | 978 | WP_000600827.1 | tyrosine-type recombinase/integrase | - |
| CA694_RS23625 (CA694_023935) | 10259..10522 | - | 264 | WP_001531263.1 | hypothetical protein | - |
| CA694_RS23630 (CA694_023940) | 10557..13523 | - | 2967 | WP_220546747.1 | Tn3-like element TnAs1 family transposase | - |
| CA694_RS23635 (CA694_023945) | 13527..14087 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| CA694_RS23640 (CA694_023950) | 14397..15974 | + | 1578 | WP_001323889.1 | PAS domain-containing methyl-accepting chemotaxis protein | - |
| CA694_RS23645 (CA694_023955) | 16066..16558 | + | 493 | Protein_15 | IS1 family transposase | - |
| CA694_RS23650 (CA694_023960) | 16710..18707 | + | 1998 | WP_032213821.1 | choline BCCT transporter BetT | - |
| CA694_RS23655 (CA694_023970) | 18770..20047 | + | 1278 | WP_053921605.1 | DUF2254 domain-containing protein | - |
| CA694_RS23665 (CA694_023980) | 20820..21179 | - | 360 | Protein_19 | DUF4158 domain-containing protein | - |
| CA694_RS23670 (CA694_023985) | 21339..21923 | + | 585 | WP_053921599.1 | recombinase family protein | - |
| CA694_RS23675 (CA694_023990) | 22312..23790 | + | 1479 | WP_000927305.1 | SulP family inorganic anion transporter | - |
| CA694_RS23680 (CA694_023995) | 23809..24636 | + | 828 | WP_053921598.1 | universal stress protein | - |
| CA694_RS23685 (CA694_024000) | 24779..24973 | + | 195 | Protein_23 | helix-turn-helix domain-containing protein | - |
| CA694_RS23690 (CA694_024005) | 25164..25721 | + | 558 | WP_053921594.1 | OsmC family protein | - |
| CA694_RS23695 (CA694_024010) | 25863..26444 | + | 582 | WP_000210408.1 | TetR/AcrR family transcriptional regulator | - |
| CA694_RS23700 (CA694_024015) | 26449..26787 | + | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| CA694_RS23705 (CA694_024020) | 26902..27147 | - | 246 | WP_225568153.1 | thioredoxin family protein | - |
| CA694_RS23710 (CA694_024025) | 27361..28467 | + | 1107 | WP_006687059.1 | alkene reductase | - |
| CA694_RS23715 (CA694_024030) | 28533..29234 | + | 702 | WP_001194072.1 | DsbA family oxidoreductase | - |
| CA694_RS23720 (CA694_024035) | 29300..30073 | + | 774 | WP_001091225.1 | SDR family oxidoreductase | - |
| CA694_RS23725 (CA694_024040) | 30259..31176 | - | 918 | WP_232404981.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CA694_RS23730 (CA694_024045) | 31311..31508 | + | 198 | WP_024262939.1 | alpha/beta hydrolase | - |
| CA694_RS23735 (CA694_024050) | 31562..31848 | + | 287 | Protein_33 | Tn3 family transposase | - |
| CA694_RS23740 (CA694_024060) | 32291..32413 | + | 123 | Protein_34 | serine/threonine protein kinase | - |
| CA694_RS23745 (CA694_024065) | 32534..33274 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| CA694_RS23750 (CA694_024070) | 33553..34530 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| CA694_RS23755 (CA694_024080) | 35287..36259 | + | 973 | Protein_37 | hypothetical protein | - |
| CA694_RS23760 (CA694_024085) | 36418..36774 | - | 357 | WP_225568154.1 | abortive infection family protein | - |
| CA694_RS23765 (CA694_024090) | 36854..37551 | + | 698 | WP_226458177.1 | IS1-like element IS1A family transposase | - |
| CA694_RS23770 (CA694_024095) | 37568..37915 | + | 348 | Protein_40 | ABC transporter permease subunit | - |
| CA694_RS23775 (CA694_024100) | 37927..38973 | + | 1047 | WP_000192349.1 | ferric ABC transporter ATP-binding protein | - |
| CA694_RS23780 (CA694_024105) | 39082..40014 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| CA694_RS23785 (CA694_024110) | 40001..41404 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| CA694_RS23790 (CA694_024115) | 41648..42628 | + | 981 | Protein_44 | IS5 family transposase | - |
| CA694_RS23795 (CA694_024120) | 42838..43173 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| CA694_RS23800 (CA694_024125) | 43123..43536 | - | 414 | Protein_46 | integrase core domain-containing protein | - |
| CA694_RS23805 (CA694_024130) | 43541..43819 | - | 279 | Protein_47 | pdcB | - |
| CA694_RS23810 (CA694_024135) | 43847..44026 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| CA694_RS23815 (CA694_024140) | 44031..44411 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CA694_RS23820 (CA694_024145) | 44411..44632 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CA694_RS23825 (CA694_024150) | 44895..45592 | + | 698 | WP_226458177.1 | IS1-like element IS1A family transposase | - |
| CA694_RS23830 (CA694_024155) | 45779..46072 | - | 294 | WP_226438991.1 | biofilm development regulator YmgB/AriR family protein | - |
| CA694_RS23835 (CA694_024160) | 46376..46480 | - | 105 | Protein_53 | IS3 family transposase | - |
| CA694_RS24425 | 46507..46656 | - | 150 | Protein_54 | IS3 family transposase | - |
| CA694_RS23845 (CA694_024170) | 47870..48484 | + | 615 | WP_032214276.1 | acid-sensing system DNA-binding response regulator EvgA | - |
| CA694_RS23850 (CA694_024175) | 48489..52082 | + | 3594 | WP_072617410.1 | acid-sensing system histidine kinase EvgS | - |
| CA694_RS23855 (CA694_024180) | 52198..52505 | + | 308 | Protein_58 | IS1-like element transposase | - |
| CA694_RS23860 (CA694_024185) | 52539..54089 | - | 1551 | Protein_59 | Tn3-like element TnAs1 family transposase | - |
| CA694_RS23865 (CA694_024195) | 54144..54848 | - | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| CA694_RS23870 (CA694_024200) | 55112..56185 | - | 1074 | WP_000557466.1 | hypothetical protein | - |
| CA694_RS23875 | 56229..56378 | - | 150 | WP_000550473.1 | hypothetical protein | - |
| CA694_RS24430 | 56585..56695 | - | 111 | Protein_63 | hypothetical protein | - |
| CA694_RS23880 (CA694_024205) | 56720..56959 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| CA694_RS23885 (CA694_024210) | 56959..57120 | + | 162 | Protein_65 | type II toxin-antitoxin system mRNA interferase RelE | - |
| CA694_RS23890 (CA694_024215) | 57255..57800 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| CA694_RS23895 (CA694_024220) | 57937..58509 | + | 573 | WP_001493762.1 | recombinase family protein | - |
| CA694_RS23900 (CA694_024225) | 58546..59937 | + | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| CA694_RS23905 (CA694_024230) | 59970..60398 | + | 429 | Protein_69 | recombinase family protein | - |
| CA694_RS23910 (CA694_024235) | 60717..61373 | - | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| CA694_RS23915 (CA694_024240) | 61768..62783 | + | 1016 | Protein_71 | IS3 family transposase | - |
| CA694_RS23920 (CA694_024245) | 62826..65609 | - | 2784 | Protein_72 | Tn3-like element Tn3 family transposase | - |
| CA694_RS23925 (CA694_024250) | 65674..65967 | + | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| CA694_RS23930 (CA694_024255) | 66014..66889 | - | 876 | WP_000239590.1 | extended-spectrum class A beta-lactamase CTX-M-15 | - |
| CA694_RS23935 (CA694_024260) | 67145..68406 | - | 1262 | Protein_75 | IS1380-like element ISEcp1 family transposase | - |
| CA694_RS23940 (CA694_024265) | 68588..68806 | - | 219 | WP_001143771.1 | DUF4158 domain-containing protein | - |
| CA694_RS23945 (CA694_024270) | 68970..69527 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| CA694_RS23950 (CA694_024275) | 69710..70570 | + | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| CA694_RS23955 (CA694_024285) | 71193..71846 | + | 654 | Protein_79 | EamA family transporter | - |
| CA694_RS23960 (CA694_024290) | 71878..73077 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| CA694_RS23965 (CA694_024295) | 73183..73833 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CA694_RS23970 (CA694_024300) | 73865..74107 | - | 243 | WP_024203663.1 | hypothetical protein | - |
| CA694_RS23975 (CA694_024305) | 74556..74960 | + | 405 | Protein_83 | IS91 family transposase | - |
| CA694_RS23980 (CA694_024310) | 75067..75903 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| CA694_RS23985 (CA694_024315) | 75903..76706 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| CA694_RS23990 (CA694_024320) | 76767..77582 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| CA694_RS24435 | 77912..77998 | + | 87 | Protein_87 | Arm DNA-binding domain-containing protein | - |
| CA694_RS24000 (CA694_024335) | 78270..79274 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| CA694_RS24005 (CA694_024340) | 79353..81119 | - | 1767 | Protein_89 | Tn3 family transposase | - |
| CA694_RS24010 (CA694_024350) | 81171..81875 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CA694_RS24015 (CA694_024355) | 82122..82595 | - | 474 | WP_004201280.1 | trimethoprim-resistant dihydrofolate reductase DfrA14 | - |
| CA694_RS24020 (CA694_024360) | 82751..83764 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| CA694_RS24025 (CA694_024370) | 84157..84726 | + | 570 | WP_001749988.1 | recombinase family protein | - |
| CA694_RS24030 (CA694_024380) | 85531..86019 | - | 489 | WP_072075272.1 | replication initiation protein | - |
| CA694_RS24035 (CA694_024385) | 86010..86714 | + | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| CA694_RS24040 (CA694_024390) | 86660..87763 | - | 1104 | WP_225568148.1 | AAA family ATPase | - |
| CA694_RS24045 (CA694_024395) | 87909..88868 | - | 960 | WP_000208728.1 | DUF523 and DUF1722 domain-containing protein | - |
| CA694_RS24050 (CA694_024400) | 88971..89381 | - | 411 | WP_000750473.1 | hydroxyisourate hydrolase | - |
| CA694_RS24055 (CA694_024405) | 89481..90206 | - | 726 | WP_000331736.1 | MerR family transcriptional regulator | - |
| CA694_RS24060 (CA694_024410) | 90324..90647 | + | 324 | Protein_100 | lipocalin family protein | - |
| CA694_RS24065 (CA694_024420) | 91459..92469 | - | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| CA694_RS24070 (CA694_024425) | 93210..94376 | + | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
| CA694_RS24075 (CA694_024430) | 94376..95347 | + | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CA694_RS24080 (CA694_024445) | 96381..96686 | - | 306 | WP_000534920.1 | hypothetical protein | - |
| CA694_RS24085 (CA694_024450) | 96740..96991 | - | 252 | WP_000181753.1 | hypothetical protein | - |
| CA694_RS24090 (CA694_024455) | 97070..98341 | - | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| CA694_RS24095 (CA694_024460) | 98341..98766 | - | 426 | WP_000668788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CA694_RS24100 (CA694_024465) | 98867..100087 | + | 1221 | Protein_108 | ISL3-like element ISKox3 family transposase | - |
| CA694_RS24105 (CA694_024470) | 100542..101507 | + | 966 | WP_001743098.1 | zincin-like metallopeptidase domain-containing protein | - |
| CA694_RS24110 | 101679..101855 | + | 177 | WP_013438824.1 | hypothetical protein | - |
| CA694_RS24115 (CA694_024475) | 101987..102418 | + | 432 | WP_001531161.1 | hypothetical protein | - |
| CA694_RS24120 (CA694_024480) | 102450..102977 | - | 528 | WP_001232861.1 | phospholipase D family protein | - |
| CA694_RS24125 (CA694_024485) | 102970..103716 | - | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| CA694_RS24130 (CA694_024490) | 103731..105638 | - | 1908 | WP_000575554.1 | type IV secretion system DNA-binding domain-containing protein | - |
| CA694_RS24135 (CA694_024495) | 106347..106739 | - | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| CA694_RS24140 (CA694_024500) | 106736..108937 | - | 2202 | WP_001241818.1 | type IA DNA topoisomerase | - |
| CA694_RS24145 (CA694_024505) | 108934..109242 | - | 309 | WP_000212005.1 | hypothetical protein | - |
| CA694_RS24150 (CA694_024510) | 109218..109553 | - | 336 | WP_000610141.1 | hypothetical protein | - |
| CA694_RS24155 (CA694_024515) | 109580..109897 | - | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| CA694_RS24160 (CA694_024520) | 109988..110389 | - | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| CA694_RS24165 (CA694_024525) | 110376..111425 | - | 1050 | WP_000342114.1 | P-type DNA transfer ATPase VirB11 | - |
| CA694_RS24170 (CA694_024530) | 111429..112625 | - | 1197 | WP_000980841.1 | VirB10/TraB/TrbI family type IV secretion system protein | - |
| CA694_RS24175 (CA694_024535) | 112622..113515 | - | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| CA694_RS24180 (CA694_024540) | 113508..114194 | - | 687 | WP_001293055.1 | type IV secretion system protein | - |
| CA694_RS24185 | 114187..114327 | - | 141 | WP_000873539.1 | hypothetical protein | - |
| CA694_RS24190 (CA694_024545) | 114404..115411 | - | 1008 | WP_032201037.1 | type IV secretion system protein | - |
| CA694_RS24195 (CA694_024550) | 115429..115713 | - | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| CA694_RS24200 (CA694_024555) | 115725..116441 | - | 717 | WP_000770034.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|