MGE detailed information
MGE type: Prophage MGE length: 47437 bp
Accession: NZ_CP042969 Location: 4550312..4597748 Organism: Escherichia coli strain CFSAN061769 Replicon: chromosome
Accession: NZ_CP042969 Location: 4550312..4597748 Organism: Escherichia coli strain CFSAN061769 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA697_RS21855 (4545386) | 4545386..4545802 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| CA697_RS21860 (4545913) | 4545913..4546626 | - | 714 | WP_063082282.1 | acid phosphatase AphA | - |
| CA697_RS25355 (4547029) | 4547029..4547409 | + | 381 | WP_001472715.1 | hypothetical protein | - |
| CA697_RS21870 (4547734) | 4547734..4548927 | - | 1194 | WP_000486966.1 | aromatic amino acid transaminase | - |
| CA697_RS21875 (4549180) | 4549180..4550259 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| CA697_RS21880 (4550312) | 4550312..4551727 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| CA697_RS21885 (4551810) | 4551810..4552793 | + | 984 | WP_000235522.1 | Quinone oxidoreductase 1 | VF |
| CA697_RS21890 (4552959) | 4552959..4553201 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| CA697_RS21895 (4553335) | 4553335..4554372 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| CA697_RS21900 (4554461) | 4554461..4555558 | + | 1098 | WP_000332264.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CA697_RS21905 (4555620) | 4555620..4555868 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| CA697_RS25360 (4555865) | 4555865..4555987 | - | 123 | WP_001437322.1 | hypothetical protein | - |
| CA697_RS21910 (4556012) | 4556012..4556575 | - | 564 | WP_116326928.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CA697_RS21915 (4557008) | 4557008..4557439 | + | 432 | WP_032195635.1 | tail fiber assembly protein | - |
| CA697_RS21920 (4557420) | 4557420..4557602 | - | 183 | WP_050485498.1 | hypothetical protein | - |
| CA697_RS25365 (4558262) | 4558262..4558564 | - | 303 | Protein_4303 | hypothetical protein | - |
| CA697_RS21930 (4558568) | 4558568..4559152 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| CA697_RS21935 (4559143) | 4559143..4560201 | - | 1059 | WP_116326930.1 | baseplate J/gp47 family protein | - |
| CA697_RS21940 (4560188) | 4560188..4560613 | - | 426 | WP_021533229.1 | phage GP46 family protein | - |
| CA697_RS21945 (4560613) | 4560613..4561161 | - | 549 | WP_044069053.1 | phage baseplate assembly protein V | - |
| CA697_RS21950 (4561161) | 4561161..4562240 | - | 1080 | WP_000999505.1 | hypothetical protein | - |
| CA697_RS21955 (4562237) | 4562237..4563610 | - | 1374 | WP_000347687.1 | DNA circularization N-terminal domain-containing protein | - |
| CA697_RS21960 (4563667) | 4563667..4564155 | - | 489 | WP_000738065.1 | hypothetical protein | - |
| CA697_RS21965 (4564220) | 4564220..4566121 | - | 1902 | WP_000774665.1 | phage tail tape measure protein | - |
| CA697_RS21970 (4566206) | 4566206..4566529 | - | 324 | WP_000571713.1 | phage tail assembly protein | - |
| CA697_RS21975 (4566526) | 4566526..4566882 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| CA697_RS21980 (4566882) | 4566882..4568378 | - | 1497 | WP_194152566.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| CA697_RS21985 (4568362) | 4568362..4568532 | - | 171 | WP_000497757.1 | DUF2635 domain-containing protein | - |
| CA697_RS21990 (4568541) | 4568541..4569101 | - | 561 | WP_000779283.1 | hypothetical protein | - |
| CA697_RS21995 (4569098) | 4569098..4569622 | - | 525 | WP_001436634.1 | hypothetical protein | - |
| CA697_RS22000 (4569594) | 4569594..4570004 | - | 411 | WP_000702407.1 | phage head closure protein | - |
| CA697_RS22005 (4570001) | 4570001..4570324 | - | 324 | WP_000924830.1 | head-tail connector protein | - |
| CA697_RS22010 (4570403) | 4570403..4571632 | - | 1230 | WP_000766101.1 | phage major capsid protein | - |
| CA697_RS22015 (4571643) | 4571643..4572245 | - | 603 | WP_000999805.1 | HK97 family phage prohead protease | - |
| CA697_RS22020 (4572238) | 4572238..4573464 | - | 1227 | WP_000923135.1 | phage portal protein | - |
| CA697_RS22025 (4573454) | 4573454..4573615 | - | 162 | WP_220528682.1 | hypothetical protein | - |
| CA697_RS22030 (4573612) | 4573612..4575345 | - | 1734 | WP_000088162.1 | terminase large subunit | - |
| CA697_RS22035 (4575342) | 4575342..4575836 | - | 495 | WP_000929172.1 | phage terminase small subunit P27 family | - |
| CA697_RS22040 (4575962) | 4575962..4576312 | - | 351 | WP_052906751.1 | HNH endonuclease signature motif containing protein | - |
| CA697_RS22045 (4576339) | 4576339..4576518 | - | 180 | WP_115196441.1 | rz1 lytic protein | - |
| CA697_RS22050 (4576496) | 4576496..4576888 | - | 393 | WP_029396332.1 | DUF2570 domain-containing protein | - |
| CA697_RS22055 (4576872) | 4576872..4577348 | - | 477 | WP_001148534.1 | glycoside hydrolase family protein | - |
| CA697_RS22060 (4577352) | 4577352..4577678 | - | 327 | WP_052906753.1 | phage holin, lambda family | - |
| CA697_RS22065 (4577970) | 4577970..4578233 | + | 264 | WP_052906754.1 | hypothetical protein | - |
| CA697_RS22070 (4578230) | 4578230..4578973 | + | 744 | WP_052906755.1 | hypothetical protein | - |
| CA697_RS22075 (4579000) | 4579000..4579341 | - | 342 | WP_052906759.1 | antiterminator Q family protein | - |
| CA697_RS22080 (4579359) | 4579359..4580348 | - | 990 | WP_054632488.1 | DUF968 domain-containing protein | - |
| CA697_RS22085 (4580356) | 4580356..4581165 | - | 810 | WP_015967850.1 | KilA-N domain-containing protein | - |
| CA697_RS22090 (4581185) | 4581185..4581574 | - | 390 | WP_000767124.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CA697_RS22095 (4581571) | 4581571..4581897 | - | 327 | WP_097398828.1 | LexA family transcriptional regulator | - |
| CA697_RS22100 (4581894) | 4581894..4582547 | - | 654 | WP_032085120.1 | phage N-6-adenine-methyltransferase | - |
| CA697_RS22105 (4582547) | 4582547..4583041 | - | 495 | WP_001359043.1 | PerC family transcriptional regulator | - |
| CA697_RS22110 (4583038) | 4583038..4583856 | - | 819 | WP_089592938.1 | helix-turn-helix domain-containing protein | - |
| CA697_RS22115 (4583853) | 4583853..4584089 | - | 237 | WP_000933949.1 | hypothetical protein | - |
| CA697_RS22120 (4584082) | 4584082..4584660 | - | 579 | WP_050553208.1 | ash family protein | - |
| CA697_RS25370 (4584590) | 4584590..4584769 | - | 180 | WP_071593530.1 | DUF4222 domain-containing protein | - |
| CA697_RS22125 (4584915) | 4584915..4585466 | - | 552 | WP_032206597.1 | protein YmfL | - |
| CA697_RS22130 (4585510) | 4585510..4585710 | - | 201 | WP_116326946.1 | YdaS family helix-turn-helix protein | - |
| CA697_RS22135 (4585801) | 4585801..4586475 | + | 675 | WP_000859462.1 | LexA family transcriptional repressor | - |
| CA697_RS22140 (4587142) | 4587142..4587504 | + | 363 | WP_000135691.1 | protein YfdP | - |
| CA697_RS22145 (4587570) | 4587570..4588394 | + | 825 | WP_116326947.1 | DUF2303 family protein | - |
| CA697_RS22150 (4588522) | 4588522..4589057 | + | 536 | Protein_4349 | 5'-deoxynucleotidase | - |
| CA697_RS22155 (4589048) | 4589048..4589926 | + | 879 | WP_053287588.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| CA697_RS22160 (4589923) | 4589923..4590126 | + | 204 | WP_000156999.1 | hypothetical protein | - |
| CA697_RS22165 (4590119) | 4590119..4590358 | + | 240 | WP_000476212.1 | hypothetical protein | - |
| CA697_RS22170 (4590355) | 4590355..4590666 | + | 312 | WP_000073886.1 | hypothetical protein | - |
| CA697_RS22175 (4590666) | 4590666..4591238 | + | 573 | WP_063501529.1 | 3'-5' exonuclease | - |
| CA697_RS22180 (4591275) | 4591275..4591556 | + | 282 | WP_001093918.1 | pyocin activator PrtN family protein | - |
| CA697_RS22185 (4591604) | 4591604..4591777 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| CA697_RS22190 (4591817) | 4591817..4592203 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| CA697_RS22195 (4592233) | 4592233..4592742 | - | 510 | WP_001339382.1 | Panacea domain-containing protein | Antitoxin Detail |
| CA697_RS22200 (4593059) | 4593059..4593163 | - | 105 | Protein_4359 | tRNA-dihydrouridine synthase | - |
| CA697_RS22205 (4593526) | 4593526..4594542 | - | 1017 | WP_000912595.1 | DUF2713 family protein | - |
| CA697_RS22210 (4594860) | 4594860..4595375 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| CA697_RS22215 (4595417) | 4595417..4595626 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| CA697_RS22220 (4595742) | 4595742..4597067 | - | 1326 | WP_001301116.1 | MATE family efflux transporter DinF | - |
| CA697_RS22225 (4597140) | 4597140..4597748 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| CA697_RS22230 (4597858) | 4597858..4598226 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| CA697_RS22235 (4598397) | 4598397..4600820 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| CA697_RS22240 (4600975) | 4600975..4601847 | - | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| CA697_RS22245 (4601860) | 4601860..4602357 | - | 498 | WP_001297295.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|