MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 117296 bp
Accession: NZ_CP042900 Location: 1..117296 Organism: Escherichia coli strain CFSAN061763 Replicon: plasmid pCFSAN061763
Accession: NZ_CP042900 Location: 1..117296 Organism: Escherichia coli strain CFSAN061763 Replicon: plasmid pCFSAN061763
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA897_RS23585 (CA897_023895) | 1043..1696 | + | 654 | Protein_1 | EamA family transporter | - |
| CA897_RS23590 (CA897_023900) | 1728..2927 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CA897_RS23595 (CA897_023905) | 3033..3683 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CA897_RS23600 (CA897_023910) | 3715..3957 | - | 243 | WP_024203663.1 | hypothetical protein | - |
| CA897_RS23605 (CA897_023915) | 4406..4810 | + | 405 | Protein_5 | IS91 family transposase ISPps1 | Transposase |
| CA897_RS23610 (CA897_023920) | 4917..5753 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| CA897_RS23615 (CA897_023925) | 5753..6556 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CA897_RS23620 (CA897_023930) | 6617..7432 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| CA897_RS24435 | 7762..7848 | + | 87 | Protein_9 | Arm DNA-binding domain-containing protein | - |
| CA897_RS23630 (CA897_023945) | 8120..9124 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| CA897_RS23635 (CA897_023950) | 9203..10969 | - | 1767 | Protein_11 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| CA897_RS23640 (CA897_023960) | 11021..11725 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CA897_RS23645 (CA897_023965) | 11972..12445 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| CA897_RS23650 (CA897_023970) | 12601..13614 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CA897_RS23655 (CA897_023980) | 14007..14576 | + | 570 | WP_001749988.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CA897_RS23660 (CA897_023990) | 15381..15869 | - | 489 | WP_072075272.1 | replication initiation protein | - |
| CA897_RS23665 (CA897_023995) | 15860..16564 | + | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| CA897_RS23670 (CA897_024000) | 16510..17613 | - | 1104 | WP_225568148.1 | AAA family ATPase | - |
| CA897_RS23675 (CA897_024005) | 17759..18718 | - | 960 | WP_000208728.1 | DUF523 and DUF1722 domain-containing protein | - |
| CA897_RS23680 (CA897_024010) | 18821..19231 | - | 411 | WP_000750473.1 | hydroxyisourate hydrolase | - |
| CA897_RS23685 (CA897_024015) | 19331..20056 | - | 726 | WP_000331736.1 | IS607 family transposase ISAfe11 | Transposase |
| CA897_RS23690 (CA897_024020) | 20174..20497 | + | 324 | Protein_22 | lipocalin family protein | - |
| CA897_RS23695 (CA897_024030) | 21309..22319 | - | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| CA897_RS23700 (CA897_024035) | 23060..24226 | + | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| CA897_RS23705 (CA897_024040) | 24226..25197 | + | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CA897_RS23710 (CA897_024055) | 26231..26536 | - | 306 | WP_000534920.1 | hypothetical protein | - |
| CA897_RS23715 (CA897_024060) | 26590..26841 | - | 252 | WP_000181753.1 | hypothetical protein | - |
| CA897_RS23720 (CA897_024065) | 26920..28191 | - | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| CA897_RS23725 (CA897_024070) | 28191..28616 | - | 426 | WP_000668788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CA897_RS23730 (CA897_024075) | 28717..29937 | + | 1221 | Protein_30 | ISL3 family transposase ISKox3 | Transposase |
| CA897_RS23735 (CA897_024080) | 30392..31357 | + | 966 | WP_001743098.1 | zincin-like metallopeptidase domain-containing protein | - |
| CA897_RS23740 | 31529..31705 | + | 177 | WP_013438824.1 | hypothetical protein | - |
| CA897_RS23745 (CA897_024085) | 31837..32268 | + | 432 | WP_001531161.1 | hypothetical protein | - |
| CA897_RS23750 (CA897_024090) | 32300..32827 | - | 528 | WP_001232861.1 | Phospholipase D | VF |
| CA897_RS23755 (CA897_024095) | 32820..33566 | - | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| CA897_RS23760 (CA897_024100) | 33581..35488 | - | 1908 | WP_000575554.1 | type IV secretion system DNA-binding domain-containing protein | - |
| CA897_RS23765 (CA897_024105) | 36197..36589 | - | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| CA897_RS23770 (CA897_024110) | 36586..38787 | - | 2202 | WP_001241818.1 | type IA DNA topoisomerase | - |
| CA897_RS23775 (CA897_024115) | 38784..39092 | - | 309 | WP_000212005.1 | hypothetical protein | - |
| CA897_RS23780 (CA897_024120) | 39068..39403 | - | 336 | WP_000610141.1 | hypothetical protein | - |
| CA897_RS23785 (CA897_024125) | 39430..39747 | - | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| CA897_RS23790 (CA897_024130) | 39838..40239 | - | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| CA897_RS23795 (CA897_024135) | 40226..41275 | - | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| CA897_RS23800 (CA897_024140) | 41279..42475 | - | 1197 | WP_000980841.1 | Type IV secretion system protein virB10 | VF |
| CA897_RS23805 (CA897_024145) | 42472..43365 | - | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| CA897_RS23810 (CA897_024150) | 43358..44044 | - | 687 | WP_001293055.1 | type IV secretion system protein | - |
| CA897_RS23815 | 44037..44177 | - | 141 | WP_000873539.1 | hypothetical protein | - |
| CA897_RS23820 (CA897_024155) | 44254..45261 | - | 1008 | WP_032201037.1 | type IV secretion system protein | - |
| CA897_RS23825 (CA897_024160) | 45279..45563 | - | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| CA897_RS23830 (CA897_024165) | 45575..46291 | - | 717 | WP_000770034.1 | type IV secretion system protein | - |
| CA897_RS23835 (CA897_024170) | 46310..49060 | - | 2751 | WP_032201036.1 | Type IV secretion system protein virB4 | VF |
| CA897_RS23840 (CA897_024175) | 49070..49369 | - | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| CA897_RS23845 (CA897_024180) | 49380..50042 | - | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| CA897_RS23850 (CA897_024185) | 50045..50260 | - | 216 | WP_001112907.1 | hypothetical protein | - |
| CA897_RS23855 (CA897_024190) | 50253..50561 | - | 309 | WP_000062770.1 | hypothetical protein | - |
| CA897_RS23860 (CA897_024195) | 50884..51789 | + | 906 | WP_011264037.1 | helix-turn-helix domain-containing protein | - |
| CA897_RS23865 (CA897_024200) | 51793..52776 | + | 984 | WP_032201035.1 | hypothetical protein | - |
| CA897_RS23870 (CA897_024205) | 52769..53257 | + | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| CA897_RS23875 (CA897_024210) | 53254..54972 | + | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| CA897_RS23880 (CA897_024220) | 55831..56188 | - | 358 | Protein_60 | IS1 family transposase IS1X4 | Transposase |
| CA897_RS23885 (CA897_024225) | 56380..57357 | + | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| CA897_RS23890 (CA897_024230) | 57405..57668 | - | 264 | WP_001531263.1 | hypothetical protein | - |
| CA897_RS23895 (CA897_024235) | 57703..60669 | - | 2967 | WP_220546747.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CA897_RS23900 (CA897_024240) | 60673..61233 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| CA897_RS23905 (CA897_024245) | 61543..63120 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| CA897_RS23910 (CA897_024250) | 63212..63704 | + | 493 | Protein_66 | IS1 family transposase IS1X2 | Transposase |
| CA897_RS23915 (CA897_024255) | 63856..65853 | + | 1998 | WP_032213821.1 | choline BCCT transporter BetT | - |
| CA897_RS23920 (CA897_024265) | 65916..67193 | + | 1278 | WP_053921605.1 | DUF2254 domain-containing protein | - |
| CA897_RS23930 (CA897_024275) | 67966..68325 | - | 360 | Protein_70 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| CA897_RS23935 (CA897_024280) | 68485..69069 | + | 585 | WP_053921599.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| CA897_RS23940 (CA897_024285) | 69458..70936 | + | 1479 | WP_000927305.1 | SulP family inorganic anion transporter | - |
| CA897_RS23945 (CA897_024290) | 70955..71782 | + | 828 | WP_053921598.1 | universal stress protein | - |
| CA897_RS23950 (CA897_024295) | 71925..72119 | + | 195 | Protein_74 | helix-turn-helix domain-containing protein | - |
| CA897_RS23955 (CA897_024300) | 72310..72867 | + | 558 | WP_053921594.1 | OsmC family protein | - |
| CA897_RS23960 (CA897_024305) | 73009..73590 | + | 582 | WP_000210408.1 | HTH-type transcriptional repressor NemR | VF |
| CA897_RS23965 (CA897_024310) | 73595..73933 | + | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| CA897_RS23970 (CA897_024315) | 74048..74293 | - | 246 | WP_225568153.1 | thioredoxin family protein | - |
| CA897_RS23975 (CA897_024320) | 74507..75613 | + | 1107 | WP_006687059.1 | alkene reductase | - |
| CA897_RS23980 (CA897_024325) | 75679..76380 | + | 702 | WP_001194072.1 | DsbA family oxidoreductase | - |
| CA897_RS23985 (CA897_024330) | 76446..77219 | + | 774 | WP_001091225.1 | SDR family oxidoreductase | - |
| CA897_RS23990 (CA897_024335) | 77405..78322 | - | 918 | WP_232404981.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CA897_RS23995 (CA897_024340) | 78457..78654 | + | 198 | WP_024262939.1 | alpha/beta hydrolase | - |
| CA897_RS24000 (CA897_024345) | 78708..78994 | + | 287 | Protein_84 | Tn3 family transposase | - |
| CA897_RS24005 (CA897_024355) | 79437..79559 | + | 123 | Protein_85 | serine/threonine protein kinase | - |
| CA897_RS24010 (CA897_024360) | 79680..80420 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| CA897_RS24015 (CA897_024365) | 80699..81676 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| CA897_RS24020 (CA897_024375) | 82433..83405 | + | 973 | Protein_88 | hypothetical protein | - |
| CA897_RS24025 (CA897_024380) | 83564..83920 | - | 357 | WP_225568154.1 | abortive infection family protein | - |
| CA897_RS24030 (CA897_024385) | 84000..84697 | + | 698 | WP_226458177.1 | IS1 family transposase IS1G | Transposase |
| CA897_RS24035 (CA897_024390) | 84714..85061 | + | 348 | Protein_91 | ABC transporter permease subunit | - |
| CA897_RS24040 (CA897_024395) | 85073..86119 | + | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| CA897_RS24045 (CA897_024400) | 86228..87160 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| CA897_RS24050 (CA897_024405) | 87147..88550 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| CA897_RS24055 (CA897_024410) | 88794..89774 | + | 981 | Protein_95 | IS5 family transposase IS5D | Transposase |
| CA897_RS24060 (CA897_024415) | 89984..90319 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| CA897_RS24065 (CA897_024420) | 90269..90682 | - | 414 | Protein_97 | IS3 family transposase ISLad1 | Transposase |
| CA897_RS24070 (CA897_024425) | 90687..90965 | - | 279 | Protein_98 | pdcB | - |
| CA897_RS24075 (CA897_024430) | 90993..91172 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| CA897_RS24080 (CA897_024435) | 91177..91557 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CA897_RS24085 (CA897_024440) | 91557..91778 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CA897_RS24090 (CA897_024445) | 92041..92738 | + | 698 | WP_226458177.1 | IS1 family transposase IS1G | Transposase |
| CA897_RS24095 (CA897_024450) | 92925..93218 | - | 294 | WP_226438991.1 | biofilm development regulator YmgB/AriR family protein | - |
| CA897_RS24100 (CA897_024455) | 93522..93626 | - | 105 | Protein_104 | IS3 family transposase | - |
| CA897_RS24440 | 93653..93802 | - | 150 | Protein_105 | IS3 family transposase | - |
| CA897_RS24110 (CA897_024465) | 95016..95630 | + | 615 | WP_032214276.1 | acid-sensing system DNA-binding response regulator EvgA | - |
| CA897_RS24115 (CA897_024470) | 95635..99228 | + | 3594 | WP_072617410.1 | acid-sensing system histidine kinase EvgS | - |
| CA897_RS24120 (CA897_024475) | 99344..99651 | + | 308 | Protein_109 | IS1-like element transposase | - |
| CA897_RS24125 (CA897_024480) | 99685..101235 | - | 1551 | Protein_110 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CA897_RS24130 (CA897_024490) | 101290..101994 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| CA897_RS24135 (CA897_024495) | 102258..103331 | - | 1074 | WP_000557466.1 | hypothetical protein | - |
| CA897_RS24140 | 103375..103524 | - | 150 | WP_000550473.1 | hypothetical protein | - |
| CA897_RS24445 | 103731..103841 | - | 111 | Protein_114 | hypothetical protein | - |
| CA897_RS24145 (CA897_024500) | 103866..104105 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| CA897_RS24150 (CA897_024505) | 104105..104266 | + | 162 | Protein_116 | type II toxin-antitoxin system mRNA interferase RelE | - |
| CA897_RS24155 (CA897_024510) | 104401..104946 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| CA897_RS24160 (CA897_024515) | 105083..105655 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| CA897_RS24165 (CA897_024520) | 105692..107083 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| CA897_RS24170 (CA897_024525) | 107116..107544 | + | 429 | Protein_120 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| CA897_RS24175 (CA897_024530) | 107863..108519 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| CA897_RS24180 (CA897_024535) | 108914..109929 | + | 1016 | Protein_122 | IS3 family transposase ISEc36 | Transposase |
| CA897_RS24185 (CA897_024540) | 109972..112755 | - | 2784 | Protein_123 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CA897_RS24190 (CA897_024545) | 112820..113113 | + | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| CA897_RS24195 (CA897_024550) | 113160..114035 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| CA897_RS24200 (CA897_024555) | 114291..115552 | - | 1262 | Protein_126 | IS1380 family transposase ISEcp1 | Transposase |
| CA897_RS24205 (CA897_024560) | 115734..115952 | - | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CA897_RS24210 (CA897_024565) | 116116..116673 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|