NZ_CP0428971..167754

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 167754 bp
Accession: NZ_CP042897        Location: 1..167754         Organism: Escherichia coli strain CFSAN061771       Replicon: plasmid pCFSAN061771_01


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CA902_RS23145 (62) 62..700 + 639 WP_000777695.1 type-F conjugative transfer system pilin assembly protein TrbC -
CA902_RS23150 (697) 697..2505 + 1809 WP_000821838.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CA902_RS23155 (2532) 2532..2789 + 258 WP_000864318.1 conjugal transfer protein TrbE -
CA902_RS23160 (2782) 2782..3525 + 744 WP_001030377.1 type-F conjugative transfer system pilin assembly protein TraF -
CA902_RS23165 (3541) 3541..3888 + 348 WP_001287910.1 conjugal transfer protein TrbA -
CA902_RS23170 (3890) 3890..4204 - 315 WP_001324103.1 hypothetical protein -
CA902_RS23175 (4285) 4285..4569 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
CA902_RS23180 (4556) 4556..5101 + 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CA902_RS23185 (5031) 5031..5372 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
CA902_RS23190 (5359) 5359..5739 + 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
CA902_RS23195 (5739) 5739..7112 + 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
CA902_RS23200 (7109) 7109..9931 + 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
CA902_RS23205 (9947) 9947..10444 + 498 WP_000605857.1 entry exclusion protein -
CA902_RS23210 (10476) 10476..11207 + 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
CA902_RS23215 (11460) 11460..13613 + 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
CA902_RS23220 (13622) 13622..14020 - 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
CA902_RS23225 (14020) 14020..14247 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
CA902_RS23230 (14329) 14329..19599 + 5271 WP_000986963.1 Multifunctional conjugation protein TraI Relaxase
CA902_RS23235 (19619) 19619..20365 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
CA902_RS23240 (20424) 20424..21284 + 861 WP_000704513.1 putative protein YcjY VF
CA902_RS23245 (21387) 21387..21947 + 561 WP_000139315.1 fertility inhibition protein FinO -
CA902_RS23250 (22083) 22083..22295 + 213 WP_001299730.1 ANR family transcriptional regulator -
CA902_RS23255 (22541) 22541..22615 + 75 Protein_23 endonuclease -
- (22871) 22871..22932 - 62 NuclAT_1 - -
- (22871) 22871..22932 - 62 NuclAT_1 - -
- (22871) 22871..22932 - 62 NuclAT_1 - -
- (22871) 22871..22932 - 62 NuclAT_1 - -
CA902_RS23260 (22976) 22976..23125 + 150 WP_001312851.1 Hok/Gef family protein -
CA902_RS23265 (23409) 23409..23666 + 258 WP_000083845.1 replication regulatory protein RepA -
CA902_RS25280 (23683) 23683..23934 - 252 WP_223195197.1 replication protein RepA -
CA902_RS25285 (23925) 23925..23972 + 48 WP_229471593.1 hypothetical protein -
CA902_RS23275 (23965) 23965..24447 + 483 WP_220726143.1 hypothetical protein -
CA902_RS23280 (24440) 24440..24905 + 466 Protein_29 plasmid replication initiator RepA -
CA902_RS23285 (24838) 24838..27843 - 3006 WP_001143760.1 Tn3 family transposase TnpA_Tn3 Transposase
CA902_RS23290 (28007) 28007..28564 + 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
CA902_RS23295 (28747) 28747..29607 + 861 WP_000027057.1 Beta-lactamase TEM ARG
CA902_RS23300 (29838) 29838..30674 - 837 WP_000480972.1 hypothetical protein ARG
CA902_RS23305 (30674) 30674..31477 - 804 WP_001082320.1 Aminoglycoside 3'-phosphotransferase ARG
CA902_RS23310 (31538) 31538..32353 - 816 WP_001043260.1 Dihydropteroate synthase ARG
CA902_RS25290 (32683) 32683..32769 + 87 Protein_36 Arm DNA-binding domain-containing protein -
CA902_RS23320 (33041) 33041..34045 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
CA902_RS23325 (34124) 34124..37090 - 2967 WP_001138070.1 Tn3 family transposase TnpA_ISPa38 Transposase
CA902_RS23330 (37093) 37093..37407 - 315 Protein_39 Tn3 family transposase TnpR_TnAs3 Transposase
CA902_RS23335 (37461) 37461..38165 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CA902_RS23340 (38235) 38235..38708 - 474 WP_004201280.1 Dihydrofolate reductase type 1 ARG
CA902_RS23345 (38864) 38864..39877 + 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
CA902_RS23350 (40325) 40325..41029 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CA902_RS23355 (41551) 41551..43065 - 1515 Protein_44 Tn3 family transposase TnpA_TnAs1 Transposase
CA902_RS23360 (43131) 43131..43835 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CA902_RS23365 (44295) 44295..44639 + 345 WP_001553768.1 hypothetical protein -
CA902_RS23370 (44820) 44820..45935 - 1116 Protein_47 IS91 family transposase IS91 Transposase
CA902_RS23375 (45935) 45935..46300 - 366 WP_000124098.1 hypothetical protein -
CA902_RS23380 (46422) 46422..47573 - 1152 WP_001442799.1 IS30 family transposase IS30D Transposase
CA902_RS23385 (47641) 47641..47898 - 258 Protein_50 IS3 family transposase IS911 Transposase
CA902_RS23395 (48177) 48177..48368 - 192 Protein_51 IS91 family transposase -
CA902_RS23400 (48539) 48539..52672 + 4134 WP_001080137.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
CA902_RS23405 (52781) 52781..53173 + 393 Protein_53 peptide deformylase -
CA902_RS23410 (53451) 53451..54455 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
CA902_RS23415 (54547) 54547..54813 - 267 Protein_55 Tn3 family transposase TnpR_TnEc1 Transposase
CA902_RS23420 (54853) 54853..56390 - 1538 Protein_56 IS66 family transposase ISEc8 Transposase
CA902_RS23425 (56440) 56440..56787 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
CA902_RS23430 (56784) 56784..57164 - 381 WP_001171523.1 IS66 family transposase ISEc8 Transposase
CA902_RS23435 (57240) 57240..58220 - 981 WP_001017346.1 NAD(P)-binding domain-containing protein -
CA902_RS23440 (58217) 58217..58486 - 270 WP_000379710.1 SemiSWEET transporter -
CA902_RS25295 (58488) 58488..58892 - 405 WP_001389361.1 hypothetical protein -
CA902_RS25300 (58864) 58864..59307 - 444 WP_001323891.1 dehydrogenase -
CA902_RS23450 (59426) 59426..59662 + 237 WP_001323890.1 colicin V immunity protein -
CA902_RS23455 (59640) 59640..59951 + 312 WP_001259758.1 colicin V -
CA902_RS23460 (60121) 60121..62217 - 2097 WP_088846058.1 peptidase domain-containing ABC transporter -
CA902_RS23465 (62210) 62210..63484 - 1275 WP_000489609.1 HlyD family secretion protein -
CA902_RS23470 (64095) 64095..64363 + 269 Protein_67 type II toxin-antitoxin system antitoxin YacA -
CA902_RS23475 (64363) 64363..64488 + 126 Protein_68 type II toxin-antitoxin system toxin YacB -
CA902_RS23480 (64641) 64641..64949 + 309 WP_000377483.1 DUF6404 family protein -
CA902_RS25305 (65027) 65027..65328 - 302 Protein_70 hypothetical protein -
CA902_RS23485 (65509) 65509..66543 + 1035 WP_001190234.1 3-deoxy-7-phosphoheptulonate synthase -
CA902_RS23490 (67409) 67409..69586 + 2178 WP_001222185.1 Ferric enterobactin receptor VF
CA902_RS23495 (69631) 69631..70587 - 957 WP_000271274.1 Ferri-bacillibactin esterase BesA VF
CA902_RS23500 (70672) 70672..71901 - 1230 WP_000933678.1 Enterochelin esterase VF
CA902_RS23505 (72005) 72005..75664 - 3660 WP_001389363.1 Multidrug efflux ATP-binding/permease protein VF
CA902_RS23510 (75804) 75804..76919 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
CA902_RS23515 (78230) 78230..79254 - 1025 Protein_77 integrase core domain-containing protein -
CA902_RS23520 (79808) 79808..80007 + 200 Protein_78 lysis protein -
CA902_RS23525 (80065) 80065..80358 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
CA902_RS23530 (80983) 80983..81503 + 521 Protein_80 IS3 family transposase IS2 Transposase
CA902_RS23540 (82735) 82735..83472 + 738 Protein_82 IS3 family transposase IS2 Transposase
CA902_RS23545 (84714) 84714..85907 + 1194 WP_000450494.1 GTP-binding protein -
CA902_RS23550 (86085) 86085..86234 + 150 Protein_84 IS3 family transposase IS2 Transposase
CA902_RS23555 (86544) 86544..87933 + 1390 Protein_85 ISNCY family transposase ISKpn21 Transposase
CA902_RS23560 (88168) 88168..89109 + 942 WP_000974762.1 hypothetical protein -
CA902_RS23565 (89238) 89238..89432 - 195 Protein_87 IS200/IS605-like element IS200C family transposase -
CA902_RS23570 (89906) 89906..91276 - 1371 WP_001312828.1 efflux transporter outer membrane subunit -
CA902_RS23575 (91280) 91280..93220 - 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
CA902_RS23580 (93217) 93217..94404 - 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
CA902_RS25310 (94999) 94999..95339 - 341 Protein_91 IS3 family transposase -
CA902_RS23585 (95385) 95385..95710 + 326 Protein_92 IS3 family transposase IS911 Transposase
CA902_RS23590 (95858) 95858..97057 - 1200 Protein_93 IS3 family transposase IS629 Transposase
CA902_RS23595 (97196) 97196..97375 + 180 Protein_94 transposase -
CA902_RS23600 (98672) 98672..99625 + 954 WP_000280980.1 Protease 7 VF
CA902_RS23605 (100058) 100058..101167 + 1110 WP_000771475.1 SDR family oxidoreductase -
CA902_RS23610 (101236) 101236..102138 + 903 WP_001312822.1 hypothetical protein VF
CA902_RS23615 (102512) 102512..102700 + 189 WP_001324033.1 hypothetical protein -
CA902_RS23620 (102821) 102821..103561 + 741 WP_001066954.1 tyrosine-type recombinase/integrase -
CA902_RS23625 (103846) 103846..104823 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
CA902_RS23630 (105569) 105569..105892 + 324 Protein_101 IS21 family transposase IS21 Transposase
CA902_RS23635 (105894) 105894..105998 + 105 Protein_102 AAA family ATPase -
CA902_RS23640 (106059) 106059..106572 + 514 Protein_103 DUF4113 domain-containing protein -
CA902_RS23650 (107805) 107805..108719 + 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
CA902_RS23655 (108719) 108719..109546 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
CA902_RS23660 (109543) 109543..110400 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
CA902_RS23665 (110397) 110397..111254 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
CA902_RS23670 (111743) 111743..112156 + 414 Protein_109 phosphopyruvate hydratase -
CA902_RS23675 (112497) 112497..112877 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
CA902_RS23680 (113257) 113257..114450 - 1194 WP_000095526.1 MFS transporter -
CA902_RS23685 (114586) 114586..116310 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
CA902_RS23690 (116311) 116311..117258 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
CA902_RS23695 (117258) 117258..119000 + 1743 WP_001015721.1 Aerobactin synthase VF
CA902_RS23700 (118997) 118997..120330 + 1334 Protein_115 L-lysine N6-monooxygenase VF
CA902_RS23705 (120356) 120356..122557 + 2202 WP_000973519.1 Ferric aerobactin receptor VF
CA902_RS23710 (122937) 122937..123634 + 698 WP_223155668.1 IS1 family transposase IS1A Transposase
CA902_RS23715 (123888) 123888..124910 - 1023 WP_000361402.1 helicase UvrD -
CA902_RS23720 (124895) 124895..126460 - 1566 WP_001128474.1 AAA family ATPase -
CA902_RS23725 (126535) 126535..126951 - 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
CA902_RS23730 (126948) 126948..127178 - 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
CA902_RS23735 (127559) 127559..131353 + 3795 WP_001144731.1 hypothetical protein -
CA902_RS23740 (131398) 131398..131814 - 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
CA902_RS23745 (131811) 131811..132041 - 231 WP_001261278.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
CA902_RS23750 (132306) 132306..132806 + 501 WP_000528932.1 HEPN family nuclease -
CA902_RS23755 (132819) 132819..133592 + 774 WP_000905949.1 hypothetical protein -
CA902_RS23760 (133759) 133759..134892 + 1134 WP_000545984.1 DUF3800 domain-containing protein -
CA902_RS23765 (134926) 134926..135438 - 513 WP_000151784.1 hypothetical protein -
CA902_RS23770 (136006) 136006..136224 + 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
CA902_RS23775 (136226) 136226..136531 + 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
CA902_RS23780 (136532) 136532..137338 + 807 WP_000016982.1 site-specific integrase -
CA902_RS23785 (138090) 138090..138845 + 756 WP_000852146.1 replication initiation protein RepE -
CA902_RS23790 (139433) 139433..140599 + 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
CA902_RS23795 (140599) 140599..141570 + 972 WP_000817035.1 ParB/RepB/Spo0J family plasmid partition protein -
CA902_RS23800 (142480) 142480..143381 + 902 Protein_135 DUF1281 domain-containing protein -
CA902_RS23805 (143385) 143385..143690 + 306 WP_010891292.1 hypothetical protein -
CA902_RS23810 (143767) 143767..144450 + 684 WP_000085939.1 DNA methylase -
CA902_RS23815 (144451) 144451..144672 + 222 WP_001104870.1 hypothetical protein -
CA902_RS23820 (144566) 144566..145120 + 555 WP_077248347.1 DUF1380 family protein -
CA902_RS23825 (145166) 145166..145942 + 777 WP_001005035.1 hypothetical protein -
CA902_RS23830 (146355) 146355..146780 + 426 WP_001198918.1 antirestriction protein -
CA902_RS23835 (146827) 146827..147249 + 423 WP_000271685.1 DUF1380 family protein -
CA902_RS23840 (147246) 147246..147437 + 192 WP_001027495.1 hypothetical protein -
CA902_RS23845 (147407) 147407..147916 - 510 WP_071600123.1 hypothetical protein -
CA902_RS23850 (148234) 148234..148773 + 540 WP_000290801.1 single-stranded DNA-binding protein -
CA902_RS23855 (148830) 148830..149063 + 234 WP_000005990.1 DUF905 family protein -
CA902_RS23860 (149129) 149129..151087 + 1959 WP_029487628.1 ParB/RepB/Spo0J family partition protein -
CA902_RS23865 (151142) 151142..151576 + 435 WP_000845928.1 conjugation system SOS inhibitor PsiB -
CA902_RS23870 (151573) 151573..152335 + 763 Protein_149 plasmid SOS inhibition protein A -
- (152304) 152304..152502 + 199 NuclAT_0 - Antitoxin Detail
- (152304) 152304..152502 + 199 NuclAT_0 - Antitoxin Detail
- (152304) 152304..152502 + 199 NuclAT_0 - Antitoxin Detail
- (152304) 152304..152502 + 199 NuclAT_0 - Antitoxin Detail
CA902_RS25315 (152509) 152509..152658 + 150 Protein_150 DUF5431 family protein -
CA902_RS23875 (152600) 152600..152725 + 126 WP_096937776.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
CA902_RS23880 (153026) 153026..153322 - 297 Protein_152 hypothetical protein -
CA902_RS23885 (153392) 153392..153598 + 207 WP_000547965.1 hypothetical protein -
CA902_RS23890 (153623) 153623..153910 + 288 WP_000107546.1 hypothetical protein -
CA902_RS23895 (154029) 154029..154850 + 822 WP_001234475.1 DUF932 domain-containing protein -
CA902_RS23900 (155145) 155145..155747 - 603 WP_077248356.1 hypothetical protein VF
CA902_RS23905 (156087) 156087..156470 + 384 WP_072647915.1 conjugal transfer relaxosome DNA-binding protein TraM -
CA902_RS23910 (156662) 156662..157309 + 648 WP_000332520.1 conjugal transfer transcriptional regulator TraJ -
CA902_RS23915 (157445) 157445..157660 + 216 WP_001352842.1 conjugal transfer relaxosome protein TraY -
CA902_RS23920 (157703) 157703..158068 + 366 WP_000340282.1 type IV conjugative transfer system pilin TraA -
CA902_RS23925 (158083) 158083..158394 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
CA902_RS23930 (158416) 158416..158982 + 567 WP_000399790.1 type IV conjugative transfer system protein TraE -
CA902_RS23935 (158969) 158969..159697 + 729 WP_001230813.1 type-F conjugative transfer system secretin TraK -
CA902_RS23940 (159697) 159697..161124 + 1428 WP_000146684.1 F-type conjugal transfer pilus assembly protein TraB -
CA902_RS23945 (161114) 161114..161704 + 591 WP_000002787.1 conjugal transfer pilus-stabilizing protein TraP -
CA902_RS23950 (161691) 161691..161888 + 198 WP_024179215.1 conjugal transfer protein TrbD -
CA902_RS23955 (161900) 161900..162151 + 252 WP_001038342.1 conjugal transfer protein TrbG -
CA902_RS23960 (162148) 162148..162663 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
CA902_RS23965 (162798) 162798..163019 + 222 WP_001278689.1 conjugal transfer protein TraR -
CA902_RS23970 (163179) 163179..165806 + 2628 WP_001064245.1 type IV secretion system protein TraC -
CA902_RS23975 (165803) 165803..166189 + 387 WP_000099691.1 type-F conjugative transfer system protein TrbI -
CA902_RS23980 (166186) 166186..166818 + 633 WP_001203717.1 type-F conjugative transfer system protein TraW -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance