MGE detailed information
MGE type: Conjugative plasmid MGE length: 167754 bp
Accession: NZ_CP042897 Location: 1..167754 Organism: Escherichia coli strain CFSAN061771 Replicon: plasmid pCFSAN061771_01
Accession: NZ_CP042897 Location: 1..167754 Organism: Escherichia coli strain CFSAN061771 Replicon: plasmid pCFSAN061771_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CA902_RS23145 (62) | 62..700 | + | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
CA902_RS23150 (697) | 697..2505 | + | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
CA902_RS23155 (2532) | 2532..2789 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
CA902_RS23160 (2782) | 2782..3525 | + | 744 | WP_001030377.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
CA902_RS23165 (3541) | 3541..3888 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
CA902_RS23170 (3890) | 3890..4204 | - | 315 | WP_001324103.1 | hypothetical protein | - |
CA902_RS23175 (4285) | 4285..4569 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
CA902_RS23180 (4556) | 4556..5101 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
CA902_RS23185 (5031) | 5031..5372 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
CA902_RS23190 (5359) | 5359..5739 | + | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
CA902_RS23195 (5739) | 5739..7112 | + | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
CA902_RS23200 (7109) | 7109..9931 | + | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
CA902_RS23205 (9947) | 9947..10444 | + | 498 | WP_000605857.1 | entry exclusion protein | - |
CA902_RS23210 (10476) | 10476..11207 | + | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
CA902_RS23215 (11460) | 11460..13613 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
CA902_RS23220 (13622) | 13622..14020 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
CA902_RS23225 (14020) | 14020..14247 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
CA902_RS23230 (14329) | 14329..19599 | + | 5271 | WP_000986963.1 | Multifunctional conjugation protein TraI | Relaxase |
CA902_RS23235 (19619) | 19619..20365 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
CA902_RS23240 (20424) | 20424..21284 | + | 861 | WP_000704513.1 | putative protein YcjY | VF |
CA902_RS23245 (21387) | 21387..21947 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
CA902_RS23250 (22083) | 22083..22295 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
CA902_RS23255 (22541) | 22541..22615 | + | 75 | Protein_23 | endonuclease | - |
- (22871) | 22871..22932 | - | 62 | NuclAT_1 | - | - |
- (22871) | 22871..22932 | - | 62 | NuclAT_1 | - | - |
- (22871) | 22871..22932 | - | 62 | NuclAT_1 | - | - |
- (22871) | 22871..22932 | - | 62 | NuclAT_1 | - | - |
CA902_RS23260 (22976) | 22976..23125 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
CA902_RS23265 (23409) | 23409..23666 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
CA902_RS25280 (23683) | 23683..23934 | - | 252 | WP_223195197.1 | replication protein RepA | - |
CA902_RS25285 (23925) | 23925..23972 | + | 48 | WP_229471593.1 | hypothetical protein | - |
CA902_RS23275 (23965) | 23965..24447 | + | 483 | WP_220726143.1 | hypothetical protein | - |
CA902_RS23280 (24440) | 24440..24905 | + | 466 | Protein_29 | plasmid replication initiator RepA | - |
CA902_RS23285 (24838) | 24838..27843 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
CA902_RS23290 (28007) | 28007..28564 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
CA902_RS23295 (28747) | 28747..29607 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
CA902_RS23300 (29838) | 29838..30674 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
CA902_RS23305 (30674) | 30674..31477 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
CA902_RS23310 (31538) | 31538..32353 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
CA902_RS25290 (32683) | 32683..32769 | + | 87 | Protein_36 | Arm DNA-binding domain-containing protein | - |
CA902_RS23320 (33041) | 33041..34045 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
CA902_RS23325 (34124) | 34124..37090 | - | 2967 | WP_001138070.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
CA902_RS23330 (37093) | 37093..37407 | - | 315 | Protein_39 | Tn3 family transposase TnpR_TnAs3 | Transposase |
CA902_RS23335 (37461) | 37461..38165 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
CA902_RS23340 (38235) | 38235..38708 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
CA902_RS23345 (38864) | 38864..39877 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
CA902_RS23350 (40325) | 40325..41029 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
CA902_RS23355 (41551) | 41551..43065 | - | 1515 | Protein_44 | Tn3 family transposase TnpA_TnAs1 | Transposase |
CA902_RS23360 (43131) | 43131..43835 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
CA902_RS23365 (44295) | 44295..44639 | + | 345 | WP_001553768.1 | hypothetical protein | - |
CA902_RS23370 (44820) | 44820..45935 | - | 1116 | Protein_47 | IS91 family transposase IS91 | Transposase |
CA902_RS23375 (45935) | 45935..46300 | - | 366 | WP_000124098.1 | hypothetical protein | - |
CA902_RS23380 (46422) | 46422..47573 | - | 1152 | WP_001442799.1 | IS30 family transposase IS30D | Transposase |
CA902_RS23385 (47641) | 47641..47898 | - | 258 | Protein_50 | IS3 family transposase IS911 | Transposase |
CA902_RS23395 (48177) | 48177..48368 | - | 192 | Protein_51 | IS91 family transposase | - |
CA902_RS23400 (48539) | 48539..52672 | + | 4134 | WP_001080137.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
CA902_RS23405 (52781) | 52781..53173 | + | 393 | Protein_53 | peptide deformylase | - |
CA902_RS23410 (53451) | 53451..54455 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
CA902_RS23415 (54547) | 54547..54813 | - | 267 | Protein_55 | Tn3 family transposase TnpR_TnEc1 | Transposase |
CA902_RS23420 (54853) | 54853..56390 | - | 1538 | Protein_56 | IS66 family transposase ISEc8 | Transposase |
CA902_RS23425 (56440) | 56440..56787 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
CA902_RS23430 (56784) | 56784..57164 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
CA902_RS23435 (57240) | 57240..58220 | - | 981 | WP_001017346.1 | NAD(P)-binding domain-containing protein | - |
CA902_RS23440 (58217) | 58217..58486 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
CA902_RS25295 (58488) | 58488..58892 | - | 405 | WP_001389361.1 | hypothetical protein | - |
CA902_RS25300 (58864) | 58864..59307 | - | 444 | WP_001323891.1 | dehydrogenase | - |
CA902_RS23450 (59426) | 59426..59662 | + | 237 | WP_001323890.1 | colicin V immunity protein | - |
CA902_RS23455 (59640) | 59640..59951 | + | 312 | WP_001259758.1 | colicin V | - |
CA902_RS23460 (60121) | 60121..62217 | - | 2097 | WP_088846058.1 | peptidase domain-containing ABC transporter | - |
CA902_RS23465 (62210) | 62210..63484 | - | 1275 | WP_000489609.1 | HlyD family secretion protein | - |
CA902_RS23470 (64095) | 64095..64363 | + | 269 | Protein_67 | type II toxin-antitoxin system antitoxin YacA | - |
CA902_RS23475 (64363) | 64363..64488 | + | 126 | Protein_68 | type II toxin-antitoxin system toxin YacB | - |
CA902_RS23480 (64641) | 64641..64949 | + | 309 | WP_000377483.1 | DUF6404 family protein | - |
CA902_RS25305 (65027) | 65027..65328 | - | 302 | Protein_70 | hypothetical protein | - |
CA902_RS23485 (65509) | 65509..66543 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
CA902_RS23490 (67409) | 67409..69586 | + | 2178 | WP_001222185.1 | Ferric enterobactin receptor | VF |
CA902_RS23495 (69631) | 69631..70587 | - | 957 | WP_000271274.1 | Ferri-bacillibactin esterase BesA | VF |
CA902_RS23500 (70672) | 70672..71901 | - | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
CA902_RS23505 (72005) | 72005..75664 | - | 3660 | WP_001389363.1 | Multidrug efflux ATP-binding/permease protein | VF |
CA902_RS23510 (75804) | 75804..76919 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
CA902_RS23515 (78230) | 78230..79254 | - | 1025 | Protein_77 | integrase core domain-containing protein | - |
CA902_RS23520 (79808) | 79808..80007 | + | 200 | Protein_78 | lysis protein | - |
CA902_RS23525 (80065) | 80065..80358 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
CA902_RS23530 (80983) | 80983..81503 | + | 521 | Protein_80 | IS3 family transposase IS2 | Transposase |
CA902_RS23540 (82735) | 82735..83472 | + | 738 | Protein_82 | IS3 family transposase IS2 | Transposase |
CA902_RS23545 (84714) | 84714..85907 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
CA902_RS23550 (86085) | 86085..86234 | + | 150 | Protein_84 | IS3 family transposase IS2 | Transposase |
CA902_RS23555 (86544) | 86544..87933 | + | 1390 | Protein_85 | ISNCY family transposase ISKpn21 | Transposase |
CA902_RS23560 (88168) | 88168..89109 | + | 942 | WP_000974762.1 | hypothetical protein | - |
CA902_RS23565 (89238) | 89238..89432 | - | 195 | Protein_87 | IS200/IS605-like element IS200C family transposase | - |
CA902_RS23570 (89906) | 89906..91276 | - | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
CA902_RS23575 (91280) | 91280..93220 | - | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
CA902_RS23580 (93217) | 93217..94404 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
CA902_RS25310 (94999) | 94999..95339 | - | 341 | Protein_91 | IS3 family transposase | - |
CA902_RS23585 (95385) | 95385..95710 | + | 326 | Protein_92 | IS3 family transposase IS911 | Transposase |
CA902_RS23590 (95858) | 95858..97057 | - | 1200 | Protein_93 | IS3 family transposase IS629 | Transposase |
CA902_RS23595 (97196) | 97196..97375 | + | 180 | Protein_94 | transposase | - |
CA902_RS23600 (98672) | 98672..99625 | + | 954 | WP_000280980.1 | Protease 7 | VF |
CA902_RS23605 (100058) | 100058..101167 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
CA902_RS23610 (101236) | 101236..102138 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
CA902_RS23615 (102512) | 102512..102700 | + | 189 | WP_001324033.1 | hypothetical protein | - |
CA902_RS23620 (102821) | 102821..103561 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
CA902_RS23625 (103846) | 103846..104823 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
CA902_RS23630 (105569) | 105569..105892 | + | 324 | Protein_101 | IS21 family transposase IS21 | Transposase |
CA902_RS23635 (105894) | 105894..105998 | + | 105 | Protein_102 | AAA family ATPase | - |
CA902_RS23640 (106059) | 106059..106572 | + | 514 | Protein_103 | DUF4113 domain-containing protein | - |
CA902_RS23650 (107805) | 107805..108719 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
CA902_RS23655 (108719) | 108719..109546 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
CA902_RS23660 (109543) | 109543..110400 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
CA902_RS23665 (110397) | 110397..111254 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
CA902_RS23670 (111743) | 111743..112156 | + | 414 | Protein_109 | phosphopyruvate hydratase | - |
CA902_RS23675 (112497) | 112497..112877 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
CA902_RS23680 (113257) | 113257..114450 | - | 1194 | WP_000095526.1 | MFS transporter | - |
CA902_RS23685 (114586) | 114586..116310 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
CA902_RS23690 (116311) | 116311..117258 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
CA902_RS23695 (117258) | 117258..119000 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
CA902_RS23700 (118997) | 118997..120330 | + | 1334 | Protein_115 | L-lysine N6-monooxygenase | VF |
CA902_RS23705 (120356) | 120356..122557 | + | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
CA902_RS23710 (122937) | 122937..123634 | + | 698 | WP_223155668.1 | IS1 family transposase IS1A | Transposase |
CA902_RS23715 (123888) | 123888..124910 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
CA902_RS23720 (124895) | 124895..126460 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
CA902_RS23725 (126535) | 126535..126951 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
CA902_RS23730 (126948) | 126948..127178 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
CA902_RS23735 (127559) | 127559..131353 | + | 3795 | WP_001144731.1 | hypothetical protein | - |
CA902_RS23740 (131398) | 131398..131814 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
CA902_RS23745 (131811) | 131811..132041 | - | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
CA902_RS23750 (132306) | 132306..132806 | + | 501 | WP_000528932.1 | HEPN family nuclease | - |
CA902_RS23755 (132819) | 132819..133592 | + | 774 | WP_000905949.1 | hypothetical protein | - |
CA902_RS23760 (133759) | 133759..134892 | + | 1134 | WP_000545984.1 | DUF3800 domain-containing protein | - |
CA902_RS23765 (134926) | 134926..135438 | - | 513 | WP_000151784.1 | hypothetical protein | - |
CA902_RS23770 (136006) | 136006..136224 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
CA902_RS23775 (136226) | 136226..136531 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
CA902_RS23780 (136532) | 136532..137338 | + | 807 | WP_000016982.1 | site-specific integrase | - |
CA902_RS23785 (138090) | 138090..138845 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
CA902_RS23790 (139433) | 139433..140599 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
CA902_RS23795 (140599) | 140599..141570 | + | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
CA902_RS23800 (142480) | 142480..143381 | + | 902 | Protein_135 | DUF1281 domain-containing protein | - |
CA902_RS23805 (143385) | 143385..143690 | + | 306 | WP_010891292.1 | hypothetical protein | - |
CA902_RS23810 (143767) | 143767..144450 | + | 684 | WP_000085939.1 | DNA methylase | - |
CA902_RS23815 (144451) | 144451..144672 | + | 222 | WP_001104870.1 | hypothetical protein | - |
CA902_RS23820 (144566) | 144566..145120 | + | 555 | WP_077248347.1 | DUF1380 family protein | - |
CA902_RS23825 (145166) | 145166..145942 | + | 777 | WP_001005035.1 | hypothetical protein | - |
CA902_RS23830 (146355) | 146355..146780 | + | 426 | WP_001198918.1 | antirestriction protein | - |
CA902_RS23835 (146827) | 146827..147249 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
CA902_RS23840 (147246) | 147246..147437 | + | 192 | WP_001027495.1 | hypothetical protein | - |
CA902_RS23845 (147407) | 147407..147916 | - | 510 | WP_071600123.1 | hypothetical protein | - |
CA902_RS23850 (148234) | 148234..148773 | + | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
CA902_RS23855 (148830) | 148830..149063 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
CA902_RS23860 (149129) | 149129..151087 | + | 1959 | WP_029487628.1 | ParB/RepB/Spo0J family partition protein | - |
CA902_RS23865 (151142) | 151142..151576 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
CA902_RS23870 (151573) | 151573..152335 | + | 763 | Protein_149 | plasmid SOS inhibition protein A | - |
- (152304) | 152304..152502 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (152304) | 152304..152502 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (152304) | 152304..152502 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (152304) | 152304..152502 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
CA902_RS25315 (152509) | 152509..152658 | + | 150 | Protein_150 | DUF5431 family protein | - |
CA902_RS23875 (152600) | 152600..152725 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
CA902_RS23880 (153026) | 153026..153322 | - | 297 | Protein_152 | hypothetical protein | - |
CA902_RS23885 (153392) | 153392..153598 | + | 207 | WP_000547965.1 | hypothetical protein | - |
CA902_RS23890 (153623) | 153623..153910 | + | 288 | WP_000107546.1 | hypothetical protein | - |
CA902_RS23895 (154029) | 154029..154850 | + | 822 | WP_001234475.1 | DUF932 domain-containing protein | - |
CA902_RS23900 (155145) | 155145..155747 | - | 603 | WP_077248356.1 | hypothetical protein | VF |
CA902_RS23905 (156087) | 156087..156470 | + | 384 | WP_072647915.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
CA902_RS23910 (156662) | 156662..157309 | + | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
CA902_RS23915 (157445) | 157445..157660 | + | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
CA902_RS23920 (157703) | 157703..158068 | + | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
CA902_RS23925 (158083) | 158083..158394 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
CA902_RS23930 (158416) | 158416..158982 | + | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
CA902_RS23935 (158969) | 158969..159697 | + | 729 | WP_001230813.1 | type-F conjugative transfer system secretin TraK | - |
CA902_RS23940 (159697) | 159697..161124 | + | 1428 | WP_000146684.1 | F-type conjugal transfer pilus assembly protein TraB | - |
CA902_RS23945 (161114) | 161114..161704 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
CA902_RS23950 (161691) | 161691..161888 | + | 198 | WP_024179215.1 | conjugal transfer protein TrbD | - |
CA902_RS23955 (161900) | 161900..162151 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
CA902_RS23960 (162148) | 162148..162663 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
CA902_RS23965 (162798) | 162798..163019 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
CA902_RS23970 (163179) | 163179..165806 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
CA902_RS23975 (165803) | 165803..166189 | + | 387 | WP_000099691.1 | type-F conjugative transfer system protein TrbI | - |
CA902_RS23980 (166186) | 166186..166818 | + | 633 | WP_001203717.1 | type-F conjugative transfer system protein TraW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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