MGE detailed information
MGE type: Mobilizable plasmid MGE length: 141344 bp
Accession: NZ_CP042894 Location: 1..141344 Organism: Escherichia coli strain CFSAN061772 Replicon: plasmid pCFSAN061772_01
Accession: NZ_CP042894 Location: 1..141344 Organism: Escherichia coli strain CFSAN061772 Replicon: plasmid pCFSAN061772_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA901_RS22440 (CA901_022560) | 84..740 | - | 657 | WP_015058260.1 | Pentapeptide repeat protein | ARG |
| CA901_RS22445 (CA901_022570) | 1245..1949 | - | 705 | WP_001067856.1 | IS6 family transposase IS15DII | Transposase |
| CA901_RS22450 (CA901_022575) | 2010..3848 | + | 1839 | Protein_2 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| CA901_RS22455 (CA901_022580) | 3882..4439 | - | 558 | Protein_3 | IS91 family transposase ISPps1 | Transposase |
| CA901_RS22460 (CA901_022585) | 4551..4856 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| CA901_RS22465 (CA901_022590) | 4884..6098 | - | 1215 | WP_062896568.1 | Bicyclomycin resistance protein | ARG |
| CA901_RS22470 (CA901_022595) | 6315..6950 | - | 636 | WP_001253263.1 | DUF3363 domain-containing protein | - |
| CA901_RS22475 (CA901_022600) | 7229..8170 | - | 942 | Protein_7 | IS91 family transposase ISVsa3 | Transposase |
| CA901_RS22480 (CA901_022605) | 8276..9112 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| CA901_RS22485 (CA901_022610) | 9112..9915 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CA901_RS22490 (CA901_022615) | 9976..10791 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| CA901_RS22495 (CA901_022625) | 11099..11950 | - | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| CA901_RS22500 (CA901_022630) | 11937..12656 | - | 720 | Protein_12 | helicase RepA family protein | - |
| CA901_RS22505 (CA901_022635) | 12671..13138 | + | 468 | Protein_13 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| CA901_RS22510 (CA901_022640) | 13141..16107 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CA901_RS22515 (CA901_022645) | 16174..16551 | + | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| CA901_RS22520 (CA901_022650) | 16803..17431 | + | 629 | Protein_16 | IS1 family transposase | - |
| CA901_RS22525 (CA901_022655) | 17433..18953 | + | 1521 | WP_001301397.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| CA901_RS22530 (CA901_022660) | 19143..22241 | - | 3099 | Protein_18 | helicase-related protein | - |
| CA901_RS22535 (CA901_022670) | 22902..23153 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CA901_RS22540 (CA901_022675) | 23150..23437 | + | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CA901_RS24655 | 23805..23918 | - | 114 | Protein_21 | alkaline phosphatase | - |
| CA901_RS22550 (CA901_022685) | 23917..24122 | + | 206 | Protein_22 | hypothetical protein | - |
| CA901_RS22555 (CA901_022690) | 24297..27794 | - | 3498 | WP_220531964.1 | Outer membrane protein IcsA autotransporter | VF |
| CA901_RS22560 (CA901_022695) | 28379..28624 | - | 246 | Protein_24 | IS91 family transposase ISEc37 | Transposase |
| CA901_RS22565 (CA901_022700) | 28686..30029 | - | 1344 | Protein_25 | IS3 family transposase ISKpn38 | Transposase |
| CA901_RS22570 (CA901_022705) | 30094..30288 | + | 195 | Protein_26 | iron-containing alcohol dehydrogenase | - |
| CA901_RS22575 (CA901_022710) | 30443..31177 | - | 735 | WP_116439166.1 | helix-turn-helix domain-containing protein | - |
| CA901_RS22580 (CA901_022715) | 31267..31575 | + | 309 | WP_088213519.1 | PerC family transcriptional regulator | - |
| CA901_RS22585 (CA901_022720) | 31839..32293 | + | 455 | Protein_29 | IS1 family transposase | - |
| CA901_RS22590 (CA901_022725) | 32388..33616 | + | 1229 | WP_116315299.1 | IS3 family transposase IS2 | Transposase |
| CA901_RS22595 (CA901_022730) | 33631..33858 | + | 228 | Protein_31 | IS1 family transposase | - |
| CA901_RS22600 (CA901_022735) | 34244..34941 | + | 698 | WP_259393608.1 | IS1 family transposase IS1X2 | Transposase |
| CA901_RS22605 (CA901_022740) | 35187..38660 | - | 3474 | WP_220531965.1 | cellulose synthase complex outer membrane protein BcsC | - |
| CA901_RS24660 (CA901_022745) | 38642..38794 | - | 153 | Protein_34 | endo-1,4-D-glucanase | - |
| CA901_RS22610 (CA901_022750) | 39127..39513 | - | 387 | Protein_35 | IS200-IS605 family transposase IS200C | Transposase |
| CA901_RS22615 (CA901_022755) | 39699..41045 | - | 1347 | Protein_36 | group II intron reverse transcriptase/maturase | - |
| CA901_RS22620 (CA901_022765) | 41771..43921 | - | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| CA901_RS22625 (CA901_022770) | 43985..46090 | - | 2106 | WP_050486294.1 | UDP-forming cellulose synthase catalytic subunit | - |
| CA901_RS22630 (CA901_022780) | 46864..47561 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| CA901_RS22645 (CA901_022795) | 50213..51097 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| CA901_RS22650 (CA901_022800) | 51390..52199 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| CA901_RS22655 (CA901_022805) | 52368..53564 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| CA901_RS22660 (CA901_022810) | 53581..54582 | + | 1002 | WP_149844702.1 | ParB family protein | - |
| CA901_RS22665 (CA901_022815) | 54808..56514 | + | 1707 | WP_104698932.1 | hypothetical protein | - |
| CA901_RS22670 (CA901_022820) | 56574..57053 | + | 480 | Protein_47 | hypothetical protein | - |
| CA901_RS22675 (CA901_022825) | 57145..58373 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| CA901_RS22680 (CA901_022830) | 58384..59499 | + | 1116 | Protein_49 | hypothetical protein | - |
| CA901_RS22685 (CA901_022835) | 59509..60324 | + | 816 | WP_113417652.1 | hypothetical protein | - |
| CA901_RS22690 (CA901_022840) | 60477..60941 | + | 465 | WP_225562644.1 | hypothetical protein | - |
| CA901_RS22695 (CA901_022845) | 60953..61462 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| CA901_RS22700 (CA901_022850) | 61622..62734 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CA901_RS22705 (CA901_022855) | 62928..63083 | - | 156 | WP_113417309.1 | Hok/Gef family protein | - |
| CA901_RS22710 (CA901_022860) | 63481..64699 | + | 1219 | Protein_55 | IS3 family transposase | - |
| CA901_RS22715 (CA901_022865) | 64997..65694 | + | 698 | WP_118014763.1 | IS1 family transposase | - |
| CA901_RS22720 (CA901_022870) | 65851..66723 | - | 873 | WP_000794337.1 | hypothetical protein | - |
| CA901_RS22725 (CA901_022875) | 66899..67363 | - | 465 | WP_001352013.1 | helix-turn-helix transcriptional regulator | - |
| CA901_RS22735 (CA901_022890) | 68498..68629 | - | 132 | Protein_60 | IS3 family transposase | - |
| CA901_RS22740 (CA901_022895) | 68911..70269 | + | 1359 | WP_000823242.1 | esterase-like activity of phytase family protein | - |
| CA901_RS22745 | 70391..70468 | - | 78 | Protein_62 | DUF6404 family protein | - |
| CA901_RS22750 (CA901_022900) | 70508..71452 | - | 945 | Protein_63 | IS66 family transposase ISEc8 | Transposase |
| CA901_RS22755 (CA901_022905) | 71520..71735 | + | 216 | Protein_64 | transposase | - |
| CA901_RS22765 (CA901_022915) | 72510..73577 | - | 1068 | WP_225567650.1 | hypothetical protein | Relaxase |
| CA901_RS22770 (CA901_022920) | 73588..74310 | - | 723 | WP_000133023.1 | hypothetical protein | - |
| CA901_RS22775 (CA901_022925) | 74307..74792 | - | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| CA901_RS22780 (CA901_022930) | 75818..76348 | + | 531 | WP_001352021.1 | hypothetical protein | - |
| CA901_RS22785 (CA901_022935) | 76351..76689 | + | 339 | WP_223656872.1 | hypothetical protein | - |
| CA901_RS22790 (CA901_022940) | 77424..78121 | + | 698 | WP_225567649.1 | IS1 family transposase | - |
| CA901_RS22795 (CA901_022950) | 78361..78546 | - | 186 | WP_000066585.1 | hypothetical protein | - |
| CA901_RS24665 (CA901_022955) | 78645..78758 | - | 114 | Protein_73 | HNH endonuclease | - |
| CA901_RS24670 | 78924..79301 | - | 378 | WP_059290365.1 | IS1 family transposase IS1R | Transposase |
| CA901_RS24675 | 79347..79622 | - | 276 | WP_000179213.1 | IS1-like element transposase | - |
| CA901_RS22805 (CA901_022965) | 79655..80236 | + | 582 | WP_257865401.1 | aromatic amino acid transport family protein | - |
| CA901_RS22810 (CA901_022970) | 80707..82260 | - | 1554 | WP_116439172.1 | L-lactate permease | - |
| CA901_RS22820 (CA901_022980) | 83574..83981 | + | 408 | WP_029396360.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| CA901_RS22825 (CA901_022985) | 84244..86001 | + | 1758 | WP_032306943.1 | sensor histidine kinase | - |
| CA901_RS22830 (CA901_022990) | 86013..86669 | + | 657 | WP_029396361.1 | response regulator | - |
| CA901_RS22835 (CA901_022995) | 86748..87445 | + | 698 | WP_223293343.1 | IS1-like element IS1D family transposase | - |
| CA901_RS22840 (CA901_023000) | 87456..87740 | - | 285 | WP_029396284.1 | hypothetical protein | - |
| CA901_RS22845 (CA901_023005) | 87856..89523 | - | 1668 | WP_032306836.1 | energy-dependent translational throttle protein EttA | - |
| CA901_RS22850 (CA901_023010) | 89716..90363 | - | 648 | WP_042004624.1 | molecular chaperone TorD family protein | - |
| CA901_RS22855 (CA901_023015) | 90446..92869 | - | 2424 | WP_042004625.1 | molybdopterin-dependent oxidoreductase | - |
| CA901_RS22860 (CA901_023020) | 92908..93735 | - | 828 | WP_033550846.1 | dimethyl sulfoxide reductase anchor subunit | - |
| CA901_RS22865 (CA901_023025) | 93738..94364 | - | 627 | WP_032306837.1 | dimethylsulfoxide reductase subunit B | - |
| CA901_RS22870 (CA901_023030) | 94515..95483 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| CA901_RS22875 (CA901_023035) | 95515..96452 | - | 938 | Protein_90 | IS30 family transposase IS30D | Transposase |
| CA901_RS24680 (CA901_023040) | 96449..96529 | - | 81 | Protein_91 | hypothetical protein | - |
| CA901_RS22880 (CA901_023045) | 96517..96942 | + | 426 | Protein_92 | IS3 family transposase | - |
| CA901_RS22885 (CA901_023055) | 97615..99123 | + | 1509 | WP_032206693.1 | group II intron reverse transcriptase/maturase | - |
| CA901_RS22890 (CA901_023060) | 99204..99693 | + | 490 | Protein_94 | IS3 family transposase ISEc52 | Transposase |
| CA901_RS22895 (CA901_023065) | 99704..100015 | + | 312 | Protein_95 | VRR-NUC domain-containing protein | - |
| CA901_RS22900 (CA901_023070) | 100082..100237 | + | 156 | WP_104698946.1 | hypothetical protein | - |
| CA901_RS22905 (CA901_023080) | 100739..101365 | + | 627 | WP_000484116.1 | hypothetical protein | - |
| CA901_RS22910 (CA901_023085) | 101362..102039 | + | 678 | WP_001354545.1 | metallophosphoesterase | - |
| CA901_RS22915 (CA901_023090) | 102036..102737 | + | 702 | WP_009453059.1 | hypothetical protein | - |
| CA901_RS22920 (CA901_023100) | 103039..104301 | + | 1263 | WP_113418312.1 | hypothetical protein | - |
| CA901_RS22925 (CA901_023105) | 104374..104880 | + | 507 | WP_000021766.1 | hypothetical protein | - |
| CA901_RS24685 | 104958..105083 | - | 126 | WP_259393606.1 | hypothetical protein | - |
| CA901_RS22930 (CA901_023110) | 105145..108261 | - | 3117 | WP_116439163.1 | HsdR family type I site-specific deoxyribonuclease | - |
| CA901_RS22935 (CA901_023115) | 108383..109636 | - | 1254 | WP_097764246.1 | restriction endonuclease subunit S | - |
| CA901_RS22940 (CA901_023120) | 109633..111180 | - | 1548 | WP_220531966.1 | type I restriction-modification system subunit M | - |
| CA901_RS22945 (CA901_023125) | 111206..112186 | + | 981 | WP_032072169.1 | IS5 family transposase ISKpn26 | Transposase |
| CA901_RS22950 (CA901_023135) | 112747..112998 | + | 252 | WP_094336865.1 | DNA polymerase III subunit theta | - |
| CA901_RS22955 (CA901_023140) | 113097..113486 | + | 390 | WP_016246560.1 | S24 family peptidase | - |
| CA901_RS22960 (CA901_023145) | 113559..113780 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CA901_RS22965 (CA901_023150) | 113780..114160 | + | 381 | WP_063501799.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CA901_RS24690 (CA901_023155) | 114165..114344 | + | 180 | WP_001411052.1 | hypothetical protein | - |
| CA901_RS22970 (CA901_023160) | 114372..115415 | + | 1044 | WP_220531963.1 | DUF968 domain-containing protein | - |
| CA901_RS22975 (CA901_023165) | 115669..115890 | + | 222 | WP_001361625.1 | host cell division inhibitor Icd-like protein | - |
| CA901_RS22980 (CA901_023170) | 115887..117005 | + | 1119 | Protein_114 | phage antirepressor KilAC domain-containing protein | - |
| CA901_RS22985 (CA901_023175) | 117038..117889 | - | 852 | WP_000611656.1 | phage repressor protein C1 | - |
| CA901_RS22990 (CA901_023180) | 118000..118209 | - | 210 | WP_063501801.1 | hypothetical protein | - |
| CA901_RS22995 (CA901_023195) | 118814..119035 | + | 222 | WP_116439157.1 | creatininase | - |
| CA901_RS23000 (CA901_023200) | 119043..120074 | + | 1032 | WP_000067530.1 | site-specific integrase | - |
| CA901_RS23005 (CA901_023205) | 120125..120436 | + | 312 | WP_206299267.1 | lysogeny establishment protein | - |
| CA901_RS23010 (CA901_023210) | 120684..121244 | + | 561 | WP_116439132.1 | Ref family protein | - |
| CA901_RS23015 (CA901_023215) | 121434..122075 | + | 642 | WP_116439133.1 | maturation control protein | - |
| CA901_RS23020 (CA901_023220) | 122166..123206 | + | 1041 | WP_024245512.1 | YaaC family protein | - |
| CA901_RS23025 (CA901_023225) | 123206..123715 | + | 510 | WP_024245513.1 | hypothetical protein | - |
| CA901_RS23030 (CA901_023230) | 123774..124022 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| CA901_RS23035 (CA901_023235) | 124019..124459 | - | 441 | WP_116439134.1 | peptide-binding protein | - |
| CA901_RS23040 (CA901_023240) | 124493..125290 | - | 798 | Protein_126 | helicase | - |
| CA901_RS23045 (CA901_023245) | 125323..127074 | - | 1752 | Protein_127 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CA901_RS23050 (CA901_023250) | 127078..127470 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| CA901_RS23055 (CA901_023255) | 127608..128492 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| CA901_RS23060 (CA901_023260) | 128524..129722 | - | 1199 | Protein_130 | Tetracycline resistance protein, class C | ARG |
| CA901_RS23065 (CA901_023265) | 129828..130478 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CA901_RS23070 (CA901_023270) | 130510..130739 | - | 230 | Protein_132 | relaxase | - |
| CA901_RS23075 (CA901_023290) | 131627..132333 | - | 707 | Protein_133 | IS6 family transposase IS15DII | Transposase |
| CA901_RS23080 (CA901_023300) | 132503..132784 | - | 282 | Protein_134 | transposase zinc-binding domain-containing protein | - |
| CA901_RS23085 (CA901_023305) | 132930..133790 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CA901_RS23090 (CA901_023310) | 134081..134785 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CA901_RS23095 (CA901_023320) | 134952..135790 | - | 839 | Protein_137 | Streptomycin 3''-adenylyltransferase | ARG |
| CA901_RS23100 (CA901_023325) | 135729..136085 | - | 357 | WP_259393607.1 | DUF1010 domain-containing protein | - |
| CA901_RS23105 (CA901_023330) | 136197..136694 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| CA901_RS23110 (CA901_023335) | 136839..137852 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| CA901_RS23115 (CA901_023345) | 137935..138639 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CA901_RS23120 (CA901_023350) | 138761..139333 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| CA901_RS23125 (CA901_023355) | 139470..140015 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| CA901_RS23130 (CA901_023360) | 140151..140333 | - | 183 | Protein_144 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| CA901_RS23135 (CA901_023365) | 140495..141109 | + | 615 | WP_014839983.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|