MGE detailed information
MGE type: Genomic_island MGE length: 40250 bp
Accession: NZ_CP042893 Location: 3625160..3665409 Organism: Escherichia coli strain CFSAN061772 Replicon: chromosome
Accession: NZ_CP042893 Location: 3625160..3665409 Organism: Escherichia coli strain CFSAN061772 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA901_RS17530 (3620506) | 3620506..3620913 | + | 408 | WP_000198515.1 | hypothetical protein | - |
| CA901_RS17535 (3620936) | 3620936..3622339 | + | 1404 | WP_000682702.1 | DUF4832 domain-containing protein | - |
| CA901_RS17540 (3622387) | 3622387..3623406 | - | 1020 | WP_000154259.1 | UDP-glucose 4-epimerase GalE | - |
| CA901_RS17545 (3623483) | 3623483..3624409 | - | 927 | WP_001332888.1 | hypothetical protein | - |
| CA901_RS17550 (3624756) | 3624756..3625453 | + | 698 | WP_225103636.1 | IS1 family transposase | - |
| CA901_RS17555 (3625469) | 3625469..3626038 | - | 570 | Protein_3442 | IS5 family transposase IS903B | Transposase |
| CA901_RS17565 (3626837) | 3626837..3628090 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CA901_RS17570 (3628102) | 3628102..3629205 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CA901_RS17575 (3629493) | 3629493..3630548 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| CA901_RS17580 (3630587) | 3630587..3630988 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3631706) | 3631706..3631786 | - | 81 | NuclAT_12 | - | - |
| - (3631706) | 3631706..3631786 | - | 81 | NuclAT_12 | - | - |
| - (3631706) | 3631706..3631786 | - | 81 | NuclAT_12 | - | - |
| - (3631706) | 3631706..3631786 | - | 81 | NuclAT_12 | - | - |
| CA901_RS17585 (3631046) | 3631046..3632290 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| CA901_RS17590 (3632382) | 3632382..3632840 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CA901_RS17595 (3633101) | 3633101..3634558 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| CA901_RS17600 (3634615) | 3634615..3635136 | - | 522 | Protein_3450 | peptide chain release factor H | - |
| CA901_RS17605 (3635132) | 3635132..3635338 | - | 207 | Protein_3451 | RtcB family protein | - |
| CA901_RS17610 (3635656) | 3635656..3636108 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| CA901_RS17615 (3636118) | 3636118..3636516 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| CA901_RS17620 (3636519) | 3636519..3636812 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| CA901_RS17625 (3636864) | 3636864..3637919 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| CA901_RS17630 (3637990) | 3637990..3638768 | - | 779 | Protein_3456 | hypothetical protein | VF |
| CA901_RS17635 (3638740) | 3638740..3640452 | + | 1713 | Protein_3457 | hypothetical protein | VF |
| CA901_RS17640 (3640676) | 3640676..3641173 | - | 498 | WP_116438975.1 | REP-associated tyrosine transposase RayT | - |
| CA901_RS17645 (3641349) | 3641349..3642098 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| CA901_RS17650 (3642308) | 3642308..3642568 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| CA901_RS17655 (3642571) | 3642571..3642849 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| CA901_RS17660 (3643005) | 3643005..3643745 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| CA901_RS17665 (3643716) | 3643716..3644483 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| CA901_RS17670 (3644689) | 3644689..3645267 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| CA901_RS17675 (3645507) | 3645507..3647951 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| CA901_RS17680 (3647994) | 3647994..3648440 | - | 447 | WP_220531955.1 | Ivy family C-type lysozyme inhibitor | - |
| CA901_RS17685 (3648621) | 3648621..3649391 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| CA901_RS17690 (3649432) | 3649432..3650568 | - | 1137 | WP_116438973.1 | ISAs1 family transposase ISEc1 | Transposase |
| CA901_RS17695 (3650999) | 3650999..3651175 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| CA901_RS17700 (3651172) | 3651172..3651390 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| CA901_RS17705 (3651368) | 3651368..3653596 | - | 2229 | Protein_3471 | hypothetical protein | VF |
| CA901_RS17710 (3653594) | 3653594..3654181 | + | 588 | Protein_3472 | hypothetical protein | VF |
| CA901_RS17715 (3654178) | 3654178..3654702 | + | 525 | WP_001080149.1 | hypothetical protein | VF |
| CA901_RS17720 (3654750) | 3654750..3655424 | + | 675 | Protein_3474 | hypothetical protein | VF |
| CA901_RS24605 (3655447) | 3655447..3657863 | + | 2417 | Protein_3475 | hypothetical protein | VF |
| CA901_RS17735 (3657874) | 3657874..3659323 | + | 1450 | Protein_3476 | hypothetical protein | VF |
| CA901_RS17740 (3659250) | 3659250..3659732 | + | 483 | WP_001284199.1 | hypothetical protein | VF |
| CA901_RS17745 (3659776) | 3659776..3660690 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| CA901_RS17750 (3660700) | 3660700..3661179 | + | 480 | WP_001236645.1 | protein YkfM | - |
| CA901_RS17755 (3661316) | 3661316..3662101 | - | 786 | WP_001086141.1 | lipoprotein | - |
| CA901_RS17765 (3662638) | 3662638..3663369 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| CA901_RS17770 (3663434) | 3663434..3663901 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| CA901_RS17775 (3663898) | 3663898..3664620 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| CA901_RS17780 (3664654) | 3664654..3665409 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| CA901_RS17785 (3665481) | 3665481..3666839 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| CA901_RS17790 (3666887) | 3666887..3667483 | - | 597 | Protein_3486 | methyltransferase domain-containing protein | - |
| CA901_RS17795 (3667514) | 3667514..3668314 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CA901_RS17800 (3668555) | 3668555..3669469 | + | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| CA901_RS17805 (3669466) | 3669466..3670269 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|