MGE detailed information
MGE type: Genomic_island MGE length: 12483 bp
Accession: NZ_CP042893 Location: 2302668..2315150 Organism: Escherichia coli strain CFSAN061772 Replicon: chromosome
Accession: NZ_CP042893 Location: 2302668..2315150 Organism: Escherichia coli strain CFSAN061772 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA901_RS11170 (2302668) | 2302668..2302934 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| CA901_RS11175 (2302934) | 2302934..2304256 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| CA901_RS11180 (2304568) | 2304568..2304776 | + | 209 | Protein_2189 | AraC family transcriptional regulator | - |
| CA901_RS11185 (2305031) | 2305031..2306257 | + | 1227 | Protein_2190 | hypothetical protein | VF |
| CA901_RS11190 (2306271) | 2306271..2306801 | + | 531 | WP_000876763.1 | hypothetical protein | VF |
| CA901_RS11195 (2306814) | 2306814..2307317 | + | 504 | WP_000825452.1 | hypothetical protein | VF |
| CA901_RS11200 (2307376) | 2307376..2307963 | + | 588 | WP_116439161.1 | hypothetical protein | VF |
| CA901_RS11205 (2308297) | 2308297..2310576 | + | 2280 | WP_116439160.1 | acid resistance putative oxidoreductase YdeP | - |
| CA901_RS11210 (2310824) | 2310824..2311021 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| CA901_RS11215 (2311096) | 2311096..2311857 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| CA901_RS11220 (2312259) | 2312259..2313941 | + | 1683 | WP_001295684.1 | sulfatase | - |
| CA901_RS11225 (2313993) | 2313993..2315150 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| CA901_RS11230 (2315116) | 2315116..2315238 | - | 123 | WP_120795387.1 | protein YneP | - |
| CA901_RS11235 (2315441) | 2315441..2317126 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| CA901_RS11240 (2317164) | 2317164..2319536 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.004 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.004 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.004 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.004 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.004 |