MGE detailed information
MGE type: Prophage MGE length: 61469 bp
Accession: NZ_CP042892 Location: 557508..618976 Organism: Escherichia coli O10:H32 strain NMBU-W12E19 Replicon: chromosome
Accession: NZ_CP042892 Location: 557508..618976 Organism: Escherichia coli O10:H32 strain NMBU-W12E19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVP48_RS05160 () | 552592..553962 | + | 1371 | WP_000423742.1 | adenylosuccinate lyase | - |
| FVP48_RS05165 () | 554131..554802 | + | 672 | WP_001265471.1 | two-component system response regulator PhoP | - |
| FVP48_RS05170 () | 554802..556262 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| FVP48_RS05175 () | 556338..557459 | + | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| FVP48_RS05180 () | 557508..558734 | - | 1227 | WP_000359434.1 | peptidase T | - |
| FVP48_RS05185 () | 558984..560120 | + | 1137 | WP_000531594.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| FVP48_RS05190 () | 560104..560967 | + | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| FVP48_RS05195 () | 561133..561462 | + | 330 | WP_071795297.1 | YkgJ family cysteine cluster protein | - |
| FVP48_RS05200 () | 561621..561836 | - | 216 | Protein_557 | DUF4376 domain-containing protein | - |
| FVP48_RS05205 () | 561909..562421 | - | 513 | WP_021574165.1 | hypothetical protein | - |
| FVP48_RS05210 () | 562507..563958 | - | 1452 | WP_173002251.1 | ISNCY family transposase KIS | Transposase |
| FVP48_RS05215 () | 564023..564622 | - | 600 | WP_173002252.1 | Outer membrane protein X | VF |
| FVP48_RS05220 () | 564690..568163 | - | 3474 | WP_173002253.1 | host specificity protein J | - |
| FVP48_RS05225 () | 568507..569139 | - | 633 | WP_032300536.1 | tail assembly protein | - |
| FVP48_RS05230 () | 569085..569828 | - | 744 | WP_001405642.1 | C40 family peptidase | - |
| FVP48_RS05235 () | 569839..570537 | - | 699 | WP_173002254.1 | phage minor tail protein L | - |
| FVP48_RS05240 () | 570736..571869 | - | 1134 | WP_000738903.1 | Outer membrane porin protein OmpD | VF |
| FVP48_RS05245 () | 572075..572416 | - | 342 | WP_050487976.1 | phage tail protein | - |
| FVP48_RS05250 () | 572409..575651 | - | 3243 | WP_173002255.1 | phage tail tape measure protein | - |
| FVP48_RS05255 () | 575699..575908 | - | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| FVP48_RS05260 () | 576004..576378 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| FVP48_RS05265 () | 576384..577100 | - | 717 | WP_001275477.1 | tail protein | - |
| FVP48_RS05270 () | 577166..577510 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| FVP48_RS05275 () | 577507..577953 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| FVP48_RS05280 () | 577950..578300 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| FVP48_RS05285 () | 578310..578636 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| FVP48_RS05290 () | 578633..581055 | - | 2423 | Protein_575 | phage portal protein | - |
| FVP48_RS05295 () | 581001..581222 | - | 222 | WP_001063025.1 | hypothetical protein | - |
| FVP48_RS05300 () | 581267..583204 | - | 1938 | WP_173002256.1 | phage major capsid protein | - |
| FVP48_RS05305 () | 583268..584929 | - | 1662 | WP_001399696.1 | terminase large subunit | - |
| FVP48_RS05310 () | 584926..585489 | - | 564 | WP_000958372.1 | terminase small subunit | - |
| FVP48_RS05315 () | 585780..586145 | - | 366 | WP_000829194.1 | HNH endonuclease | - |
| FVP48_RS05320 () | 586187..586387 | + | 201 | WP_000095741.1 | YlcI/YnfO family protein | - |
| FVP48_RS05325 () | 586519..586845 | - | 327 | WP_000828072.1 | TonB family protein | - |
| FVP48_RS05330 () | 587189..587413 | - | 225 | WP_000735655.1 | hypothetical protein | - |
| FVP48_RS05335 () | 587499..587684 | - | 186 | WP_071529499.1 | Rz1 family lipoprotein | - |
| FVP48_RS05340 () | 587688..587904 | - | 217 | Protein_585 | endopeptidase | - |
| FVP48_RS05345 () | 587907..588038 | - | 132 | WP_001280922.1 | hypothetical protein | - |
| FVP48_RS05350 () | 588133..588828 | - | 696 | WP_000661714.1 | phage antirepressor protein | - |
| FVP48_RS05355 () | 589102..589635 | - | 534 | WP_000992078.1 | lysozyme | - |
| FVP48_RS05360 () | 589686..590030 | - | 345 | WP_053295529.1 | YdfR family protein | - |
| FVP48_RS05365 () | 590034..590249 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| FVP48_RS05370 () | 590325..590594 | - | 270 | WP_173002257.1 | DUF826 domain-containing protein | - |
| FVP48_RS05375 () | 590632..590814 | - | 183 | WP_032253528.1 | DUF1378 family protein | - |
| FVP48_RS05380 () | 590949..592901 | - | 1953 | WP_173002258.1 | SASA family carbohydrate esterase | - |
| FVP48_RS05400 () | 593696..594754 | - | 1059 | WP_173002259.1 | site-specific DNA-methyltransferase | - |
| FVP48_RS05405 () | 594906..595103 | - | 198 | WP_000917768.1 | hypothetical protein | - |
| FVP48_RS05410 () | 595315..596004 | - | 690 | WP_024243668.1 | antiterminator | - |
| FVP48_RS05415 () | 595997..596359 | - | 363 | WP_032331587.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FVP48_RS05420 () | 596373..597422 | - | 1050 | WP_173002260.1 | DUF968 domain-containing protein | - |
| FVP48_RS05425 () | 597424..597702 | - | 279 | WP_011478175.1 | hypothetical protein | - |
| FVP48_RS05430 () | 597870..598025 | - | 156 | WP_000813256.1 | type I toxin-antitoxin system toxin HokD | - |
| FVP48_RS05435 () | 598317..598661 | - | 345 | WP_000206824.1 | hypothetical protein | - |
| FVP48_RS05440 () | 598995..599173 | - | 179 | Protein_602 | hypothetical protein | - |
| FVP48_RS05445 () | 599175..599600 | - | 426 | WP_000137946.1 | hypothetical protein | - |
| FVP48_RS05450 () | 599696..600052 | - | 357 | WP_173002261.1 | hypothetical protein | - |
| FVP48_RS05455 () | 600030..600491 | - | 462 | WP_001209473.1 | ead/Ea22-like family protein | - |
| FVP48_RS05460 () | 600488..600784 | - | 297 | WP_001266130.1 | DUF4406 domain-containing protein | - |
| FVP48_RS05465 () | 600781..601173 | - | 393 | WP_001792328.1 | DUF977 family protein | - |
| FVP48_RS05470 () | 601189..601959 | - | 771 | WP_112912496.1 | DUF1627 domain-containing protein | - |
| FVP48_RS05475 () | 601981..602727 | - | 747 | WP_000788950.1 | IS21 family transposase ISAba8 | Transposase |
| FVP48_RS05480 () | 602734..603696 | - | 963 | WP_016234248.1 | helix-turn-helix domain-containing protein | - |
| FVP48_RS05485 () | 603719..604144 | - | 426 | WP_032210757.1 | Rha family transcriptional regulator | - |
| FVP48_RS05490 () | 604141..604443 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| FVP48_RS05495 () | 604541..604912 | + | 372 | WP_123007420.1 | hypothetical protein | - |
| FVP48_RS05500 () | 604933..605124 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| FVP48_RS05505 () | 605126..605404 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FVP48_RS05510 () | 605696..605851 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| FVP48_RS05515 () | 606011..606229 | + | 219 | WP_001171951.1 | hypothetical protein | - |
| FVP48_RS05520 () | 606252..606653 | + | 402 | WP_000394529.1 | hypothetical protein | - |
| FVP48_RS05525 () | 606613..606891 | - | 279 | WP_000358771.1 | hypothetical protein | - |
| FVP48_RS05530 () | 607451..607639 | + | 189 | WP_000449172.1 | cell division inhibitor | - |
| FVP48_RS05535 () | 607636..607824 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| FVP48_RS05540 () | 607919..610390 | + | 2472 | WP_173002262.1 | exonuclease | - |
| FVP48_RS05545 () | 610452..610721 | + | 270 | WP_000003742.1 | excisionase | - |
| FVP48_RS05550 () | 610690..611808 | + | 1119 | WP_000074972.1 | hypothetical protein ; Integrase | Integrase |
| FVP48_RS05555 () | 611975..612769 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| FVP48_RS05560 () | 612766..613812 | + | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| FVP48_RS05565 () | 613870..614331 | + | 462 | WP_000076376.1 | DUF3592 domain-containing protein | - |
| FVP48_RS05570 () | 614328..615116 | + | 789 | WP_000713462.1 | TPM domain-containing protein | - |
| FVP48_RS05575 () | 615236..616075 | - | 840 | WP_032176161.1 | NAD-dependent protein deacylase | - |
| FVP48_RS05580 () | 616091..617002 | - | 912 | WP_118020184.1 | N-acetylglucosamine kinase | - |
| FVP48_RS05585 () | 617031..618275 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| FVP48_RS05590 () | 618275..618976 | - | 702 | WP_001033694.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| FVP48_RS05595 () | 618969..620168 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| FVP48_RS05600 () | 620430..621503 | + | 1074 | WP_000810253.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|