MGE detailed information
MGE type: Mobilizable plasmid MGE length: 57966 bp
Accession: NZ_CP042888 Location: 1..57966 Organism: Escherichia coli O10:H32 strain NMBU-W12E19 Replicon: plasmid pNMBU-W12E19_04
Accession: NZ_CP042888 Location: 1..57966 Organism: Escherichia coli O10:H32 strain NMBU-W12E19 Replicon: plasmid pNMBU-W12E19_04
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVP48_RS01935 () | 1..1029 | + | 1029 | WP_001175213.1 | replication initiation protein | - |
| FVP48_RS01940 () | 2083..2244 | + | 162 | WP_001128311.1 | hypothetical protein | - |
| FVP48_RS01945 () | 2628..2789 | + | 162 | WP_000775236.1 | type I toxin-antitoxin system Hok family toxin | - |
| FVP48_RS01950 () | 2939..3535 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| FVP48_RS01955 () | 3553..3723 | - | 171 | WP_000186151.1 | hypothetical protein | - |
| FVP48_RS01960 () | 3911..4576 | - | 666 | WP_000532148.1 | P-loop NTPase | - |
| FVP48_RS01965 () | 5174..5503 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| FVP48_RS01970 () | 6084..6407 | + | 324 | WP_000427403.1 | hypothetical protein | - |
| FVP48_RS01975 () | 6449..6658 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| FVP48_RS01980 () | 6755..6979 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| FVP48_RS01985 () | 7031..7291 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| FVP48_RS01990 () | 7281..7532 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| FVP48_RS01995 () | 8082..8360 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| FVP48_RS02000 () | 8780..9046 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| FVP48_RS02005 () | 9153..9335 | - | 183 | WP_001481829.1 | hypothetical protein | - |
| FVP48_RS02010 () | 9893..10075 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| FVP48_RS02015 () | 10100..10537 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| FVP48_RS02020 () | 10668..10994 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| FVP48_RS02025 () | 11014..11721 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| FVP48_RS02030 () | 11723..12475 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| FVP48_RS02035 () | 12493..12894 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| FVP48_RS02040 () | 13263..13604 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| FVP48_RS02045 () | 13601..17353 | + | 3753 | WP_173002235.1 | relaxase | - |
| FVP48_RS02050 () | 17396..17836 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| FVP48_RS02055 () | 18182..18388 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| FVP48_RS02060 () | 18457..20622 | - | 2166 | WP_000765166.1 | type IA DNA topoisomerase | - |
| FVP48_RS02065 () | 20627..21202 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| FVP48_RS02070 () | 21372..23048 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| FVP48_RS02075 () | 23143..23658 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| FVP48_RS02080 () | 23705..24358 | - | 654 | WP_000572553.1 | hypothetical protein | - |
| FVP48_RS02085 () | 24370..25494 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| FVP48_RS02090 () | 26394..26591 | - | 198 | WP_001356717.1 | hypothetical protein | - |
| FVP48_RS02095 () | 27197..27406 | + | 210 | WP_001444223.1 | hypothetical protein | - |
| FVP48_RS02100 () | 27403..28779 | - | 1377 | WP_173002236.1 | hypothetical protein | VF |
| FVP48_RS02105 () | 28792..29427 | - | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| FVP48_RS02110 () | 29431..29913 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| FVP48_RS02115 () | 29980..30537 | - | 558 | WP_000095049.1 | hypothetical protein | - |
| FVP48_RS02120 () | 30582..31691 | - | 1110 | WP_000974902.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| FVP48_RS02125 () | 31682..33220 | - | 1539 | WP_000466227.1 | Type II secretion system protein E | VF |
| FVP48_RS02130 () | 33245..33739 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| FVP48_RS02135 () | 33723..35045 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| FVP48_RS02140 () | 35084..36727 | - | 1644 | WP_001035588.1 | Outer membrane lipoprotein BfpB | VF |
| FVP48_RS02145 () | 36720..37262 | - | 543 | WP_001220544.1 | sigma 54-interacting transcriptional regulator | - |
| FVP48_RS02150 () | 37309..39267 | - | 1959 | WP_039022943.1 | type IV secretory system conjugative DNA transfer family protein | - |
| FVP48_RS02155 () | 39283..40338 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| FVP48_RS02160 () | 40357..41496 | - | 1140 | WP_001542008.1 | Type IV secretion system protein virB10 | VF |
| FVP48_RS02165 () | 41486..42187 | - | 702 | WP_049824867.1 | Type IV secretion system protein PtlF | VF |
| FVP48_RS02170 () | 42253..42987 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| FVP48_RS02175 () | 43153..45510 | - | 2358 | WP_039022942.1 | VirB4 family type IV secretion system protein | - |
| FVP48_RS02180 () | 45516..45836 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| FVP48_RS02185 () | 45907..46095 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| FVP48_RS02190 () | 46197..46781 | - | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| FVP48_RS02195 () | 46802..47200 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| FVP48_RS02200 () | 47319..47756 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| FVP48_RS02205 () | 47762..48997 | - | 1236 | WP_039022941.1 | hypothetical protein | VF |
| FVP48_RS02210 () | 49000..49299 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| FVP48_RS02215 () | 49366..50001 | - | 636 | WP_022645136.1 | hypothetical protein | - |
| FVP48_RS02220 () | 50049..50881 | + | 833 | Protein_57 | DNA primase | - |
| FVP48_RS02225 () | 51095..51319 | - | 225 | WP_000713561.1 | EexN family lipoprotein | - |
| FVP48_RS02230 () | 51328..51972 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| FVP48_RS02235 () | 51978..52973 | - | 996 | WP_001028541.1 | hypothetical protein | VF |
| FVP48_RS02240 () | 52977..53234 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| FVP48_RS02245 () | 53231..53533 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| FVP48_RS02250 () | 53804..54016 | - | 213 | WP_039022940.1 | hypothetical protein | - |
| FVP48_RS02255 () | 54027..54197 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| FVP48_RS02260 () | 54201..54644 | - | 444 | WP_072037179.1 | NfeD family protein | - |
| FVP48_RS02265 () | 55018..55971 | - | 954 | WP_072109880.1 | SPFH/Band 7/PHB domain protein | - |
| FVP48_RS02270 () | 55998..56174 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| FVP48_RS02275 () | 56167..56382 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| FVP48_RS02280 () | 56375..56881 | - | 507 | WP_039022938.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|